RNA–Protein interactions for RNA: ENST00000557014.1

GTF3AP2-201, Transcript of general transcription factor IIIA pseudogene 2, humanhuman

BASIC

Gene GTF3AP2, Length 266 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP2-201ENST00000557014 NISCHQ9Y2I1 1504 aa7.38□□□□□ -1.23
GTF3AP2-201ENST00000557014 AEBP2Q6ZN18 517 aaPredicted RBP7.22□□□□□ -1.25
GTF3AP2-201ENST00000557014 CHIC1Q5VXU3 224 aa6.94□□□□□ -1.3
GTF3AP2-201ENST00000557014 ABCC9O60706 1549 aa6.93□□□□□ -1.3
GTF3AP2-201ENST00000557014 CCDC180Q9P1Z9 1646 aa6.74□□□□□ -1.33
GTF3AP2-201ENST00000557014 DNAJC5BQ9UF47 199 aa6.66□□□□□ -1.34
GTF3AP2-201ENST00000557014 RB1CC1Q8TDY2 1594 aa6.49□□□□□ -1.37
GTF3AP2-201ENST00000557014 UNC13AQ9UPW8 1703 aa6.42□□□□□ -1.38
GTF3AP2-201ENST00000557014 PABPN1Q86U42 306 aaKnown RBP eCLIP6.41□□□□□ -1.38
GTF3AP2-201ENST00000557014 NACADO15069 1562 aa6.4□□□□□ -1.39
GTF3AP2-201ENST00000557014 SENP3Q9H4L4 574 aaPredicted RBP6.38□□□□□ -1.39
GTF3AP2-201ENST00000557014 DCAF8L2P0C7V8 631 aa6.34□□□□□ -1.39
GTF3AP2-201ENST00000557014 BICRAQ9NZM4 1560 aa6.33□□□□□ -1.4
GTF3AP2-201ENST00000557014 CC2D2AQ9P2K1 1620 aa6.25□□□□□ -1.41
GTF3AP2-201ENST00000557014 DNAJC5Q9H3Z4 198 aa6.25□□□□□ -1.41
GTF3AP2-201ENST00000557014 CECR2Q9BXF3 1484 aa6.25□□□□□ -1.41
GTF3AP2-201ENST00000557014 MYO15BQ96JP2 1530 aa6.2□□□□□ -1.42
GTF3AP2-201ENST00000557014 PHF23Q9BUL5 403 aaPredicted RBP6.19□□□□□ -1.42
GTF3AP2-201ENST00000557014 EIF4G1Q04637 1599 aaKnown RBP6.18□□□□□ -1.42
GTF3AP2-201ENST00000557014 SHROOM4Q9ULL8 1493 aa6.16□□□□□ -1.42
GTF3AP2-201ENST00000557014 SCRIBQ14160 1630 aa6.14□□□□□ -1.43
GTF3AP2-201ENST00000557014 ZCCHC6Q5VYS8 1495 aaKnown RBP6.07□□□□□ -1.44
GTF3AP2-201ENST00000557014 DCAF1Q9Y4B6 1507 aa6.06□□□□□ -1.44
GTF3AP2-201ENST00000557014 CUX2O14529 1486 aa6.02□□□□□ -1.45
GTF3AP2-201ENST00000557014 ERCC6Q03468 1493 aa5.98□□□□□ -1.45
GTF3AP2-201ENST00000557014 POTEDQ86YR6 584 aa5.92□□□□□ -1.46
GTF3AP2-201ENST00000557014 TRIM41Q8WV44 630 aa5.92□□□□□ -1.46
GTF3AP2-201ENST00000557014 NESP48681 1621 aa5.9□□□□□ -1.46
GTF3AP2-201ENST00000557014 NCAPD3P42695 1498 aa5.89□□□□□ -1.47
GTF3AP2-201ENST00000557014 THOC2Q8NI27 1593 aaKnown RBP5.88□□□□□ -1.47
GTF3AP2-201ENST00000557014 FOXD1Q16676 465 aa5.86□□□□□ -1.47
GTF3AP2-201ENST00000557014 KIF21AQ7Z4S6 1674 aa5.85□□□□□ -1.47
GTF3AP2-201ENST00000557014 ATAD2BQ9ULI0 1458 aa5.85□□□□□ -1.47
GTF3AP2-201ENST00000557014 SMARCA2P51531 1590 aa5.84□□□□□ -1.48
GTF3AP2-201ENST00000557014 HMGXB3Q12766 1538 aa5.84□□□□□ -1.48
GTF3AP2-201ENST00000557014 SMARCA4P51532 1647 aa5.82□□□□□ -1.48
GTF3AP2-201ENST00000557014 LAMC3Q9Y6N6 1575 aa5.8□□□□□ -1.48
GTF3AP2-201ENST00000557014 BAZ1BQ9UIG0 1483 aaKnown RBP5.79□□□□□ -1.48
GTF3AP2-201ENST00000557014 BAZ1AQ9NRL2 1556 aaPredicted RBP5.77□□□□□ -1.49
GTF3AP2-201ENST00000557014 PDS5BQ9NTI5 1447 aa5.76□□□□□ -1.49
GTF3AP2-201ENST00000557014 MSH5O43196 834 aa5.74□□□□□ -1.49
GTF3AP2-201ENST00000557014 PEG3Q9GZU2 1588 aa5.74□□□□□ -1.49
GTF3AP2-201ENST00000557014 WDR62O43379 1518 aa5.74□□□□□ -1.49
GTF3AP2-201ENST00000557014 MRC2Q9UBG0 1479 aa5.73□□□□□ -1.49
GTF3AP2-201ENST00000557014 OSCARQ8IYS5 282 aa5.71□□□□□ -1.5
GTF3AP2-201ENST00000557014 RIMBP3CA6NJZ7 1639 aa5.7□□□□□ -1.5
GTF3AP2-201ENST00000557014 RIMBP3BA6NNM3 1639 aa5.7□□□□□ -1.5
GTF3AP2-201ENST00000557014 RIMBP3Q9UFD9 1639 aa5.7□□□□□ -1.5
GTF3AP2-201ENST00000557014 MROH2BQ7Z745 1585 aa5.7□□□□□ -1.5
GTF3AP2-201ENST00000557014 CADPSQ9ULU8 1353 aa5.69□□□□□ -1.5
GTF3AP2-201ENST00000557014 CEP164Q9UPV0 1460 aa5.67□□□□□ -1.5
GTF3AP2-201ENST00000557014 WIZO95785 1651 aa5.66□□□□□ -1.5
GTF3AP2-201ENST00000557014 FANCD2Q9BXW9 1451 aa5.64□□□□□ -1.51
GTF3AP2-201ENST00000557014 ARHGEF11O15085 1522 aa5.64□□□□□ -1.51
GTF3AP2-201ENST00000557014 URB2Q14146 1524 aaKnown RBP5.63□□□□□ -1.51
GTF3AP2-201ENST00000557014 TRHP20396 242 aaPredicted RBP5.61□□□□□ -1.51
GTF3AP2-201ENST00000557014 PRDM2Q13029 1718 aa5.61□□□□□ -1.51
GTF3AP2-201ENST00000557014 CYB5RLQ6IPT4 315 aa5.61□□□□□ -1.51
GTF3AP2-201ENST00000557014 CHD1O14646 1710 aa5.6□□□□□ -1.51
GTF3AP2-201ENST00000557014 ZNF608Q9ULD9 1512 aaPredicted RBP5.59□□□□□ -1.51
GTF3AP2-201ENST00000557014 CFTRP13569 1480 aa5.59□□□□□ -1.51
GTF3AP2-201ENST00000557014 EIF4G3O43432 1585 aaKnown RBP5.57□□□□□ -1.52
GTF3AP2-201ENST00000557014 ARAP1Q96P48 1450 aa5.57□□□□□ -1.52
GTF3AP2-201ENST00000557014 IFT140Q96RY7 1462 aa5.55□□□□□ -1.52
GTF3AP2-201ENST00000557014 TOP2AP11388 1531 aaKnown RBP5.53□□□□□ -1.52
GTF3AP2-201ENST00000557014 TOPBP1Q92547 1522 aa5.53□□□□□ -1.52
GTF3AP2-201ENST00000557014 FBLN2P98095 1184 aa5.52□□□□□ -1.53
GTF3AP2-201ENST00000557014 AQRO60306 1485 aaKnown RBP eCLIP5.51□□□□□ -1.53
GTF3AP2-201ENST00000557014 RSF1Q96T23 1441 aaPredicted RBP5.51□□□□□ -1.53
GTF3AP2-201ENST00000557014 TARBP1Q13395 1621 aaKnown RBP5.51□□□□□ -1.53
GTF3AP2-201ENST00000557014 DNMBPQ6XZF7 1577 aa5.5□□□□□ -1.53
GTF3AP2-201ENST00000557014 ABCC8Q09428 1581 aa5.48□□□□□ -1.53
GTF3AP2-201ENST00000557014 CLASP1Q7Z460 1538 aa5.48□□□□□ -1.53
GTF3AP2-201ENST00000557014 CCDC88BA6NC98 1476 aa5.47□□□□□ -1.53
GTF3AP2-201ENST00000557014 PIAS4Q8N2W9 510 aaPredicted RBP5.47□□□□□ -1.53
GTF3AP2-201ENST00000557014 POLA1P09884 1462 aaPredicted RBP5.45□□□□□ -1.54
GTF3AP2-201ENST00000557014 RAD54L2Q9Y4B4 1467 aa5.45□□□□□ -1.54
GTF3AP2-201ENST00000557014 SYNJ1O43426 1573 aa5.45□□□□□ -1.54
GTF3AP2-201ENST00000557014 SNAPC4Q5SXM2 1469 aa5.45□□□□□ -1.54
GTF3AP2-201ENST00000557014 TDRD9Q8NDG6 1382 aaKnown RBP5.44□□□□□ -1.54
GTF3AP2-201ENST00000557014 GAPVD1Q14C86 1478 aa5.43□□□□□ -1.54
GTF3AP2-201ENST00000557014 SOGA1O94964 1423 aa5.42□□□□□ -1.54
GTF3AP2-201ENST00000557014 KIF13AQ9H1H9 1805 aa5.42□□□□□ -1.54
GTF3AP2-201ENST00000557014 CHMP7Q8WUX9 453 aaPredicted RBP5.42□□□□□ -1.54
GTF3AP2-201ENST00000557014 PBRM1Q86U86 1689 aa5.42□□□□□ -1.54
GTF3AP2-201ENST00000557014 MAGI1Q96QZ7 1491 aaPredicted RBP5.41□□□□□ -1.54
GTF3AP2-201ENST00000557014 ERCC6L2Q5T890 1561 aa5.41□□□□□ -1.54
GTF3AP2-201ENST00000557014 WDR97A6NE52 1622 aa5.41□□□□□ -1.54
GTF3AP2-201ENST00000557014 SYNJ2O15056 1496 aa5.4□□□□□ -1.54
GTF3AP2-201ENST00000557014 GRIN2BQ13224 1484 aa5.39□□□□□ -1.55
GTF3AP2-201ENST00000557014 FGD5Q6ZNL6 1462 aa5.39□□□□□ -1.55
GTF3AP2-201ENST00000557014 ILDR1Q86SU0 546 aaPredicted RBP5.38□□□□□ -1.55
GTF3AP2-201ENST00000557014 CUX1P39880 1505 aa5.37□□□□□ -1.55
GTF3AP2-201ENST00000557014 CEP170Q5SW79 1584 aa5.36□□□□□ -1.55
GTF3AP2-201ENST00000557014 ABCA5Q8WWZ7 1642 aa5.35□□□□□ -1.55
GTF3AP2-201ENST00000557014 TSPOAP1O95153 1857 aa5.34□□□□□ -1.55
GTF3AP2-201ENST00000557014 SHROOM2Q13796 1616 aa5.34□□□□□ -1.55
GTF3AP2-201ENST00000557014 PLPPR3Q6T4P5 718 aa5.34□□□□□ -1.55
GTF3AP2-201ENST00000557014 GRIN2AQ12879 1464 aa5.33□□□□□ -1.56
GTF3AP2-201ENST00000557014 KDM4FA0A1W2PPD8 638 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms