RNA–Protein interactions for RNA: ENST00000556993.1

SUSD6-203, Transcript of sushi domain containing 6, humanhuman

TSL 3

Gene SUSD6, Length 608 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD6-203ENST00000556993 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
SUSD6-203ENST00000556993 AEBP2Q6ZN18 517 aaPredicted RBP19.07■□□□□ 0.64
SUSD6-203ENST00000556993 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
SUSD6-203ENST00000556993 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
SUSD6-203ENST00000556993 ABCC9O60706 1549 aa17■□□□□ 0.31
SUSD6-203ENST00000556993 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
SUSD6-203ENST00000556993 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
SUSD6-203ENST00000556993 NACADO15069 1562 aa16.23■□□□□ 0.19
SUSD6-203ENST00000556993 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
SUSD6-203ENST00000556993 MYO15BQ96JP2 1530 aa16.1■□□□□ 0.17
SUSD6-203ENST00000556993 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
SUSD6-203ENST00000556993 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
SUSD6-203ENST00000556993 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
SUSD6-203ENST00000556993 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
SUSD6-203ENST00000556993 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
SUSD6-203ENST00000556993 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
SUSD6-203ENST00000556993 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
SUSD6-203ENST00000556993 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
SUSD6-203ENST00000556993 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
SUSD6-203ENST00000556993 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
SUSD6-203ENST00000556993 CC2D2AQ9P2K1 1620 aa15.38■□□□□ 0.05
SUSD6-203ENST00000556993 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.04
SUSD6-203ENST00000556993 FOXD1Q16676 465 aa15.16■□□□□ 0.02
SUSD6-203ENST00000556993 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
SUSD6-203ENST00000556993 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
SUSD6-203ENST00000556993 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
SUSD6-203ENST00000556993 SMARCA2P51531 1590 aa14.93□□□□□ -0.02
SUSD6-203ENST00000556993 BAZ1AQ9NRL2 1556 aaPredicted RBP14.92□□□□□ -0.02
SUSD6-203ENST00000556993 HMGXB3Q12766 1538 aa14.89□□□□□ -0.03
SUSD6-203ENST00000556993 PEG3Q9GZU2 1588 aa14.84□□□□□ -0.03
SUSD6-203ENST00000556993 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
SUSD6-203ENST00000556993 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.04
SUSD6-203ENST00000556993 PLPPR3Q6T4P5 718 aa14.7□□□□□ -0.06
SUSD6-203ENST00000556993 ERCC6Q03468 1493 aa14.69□□□□□ -0.06
SUSD6-203ENST00000556993 CUX2O14529 1486 aa14.66□□□□□ -0.06
SUSD6-203ENST00000556993 NESP48681 1621 aa14.63□□□□□ -0.07
SUSD6-203ENST00000556993 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
SUSD6-203ENST00000556993 WIZO95785 1651 aa14.58□□□□□ -0.08
SUSD6-203ENST00000556993 RSF1Q96T23 1441 aaPredicted RBP14.53□□□□□ -0.08
SUSD6-203ENST00000556993 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
SUSD6-203ENST00000556993 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
SUSD6-203ENST00000556993 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
SUSD6-203ENST00000556993 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.09
SUSD6-203ENST00000556993 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.1
SUSD6-203ENST00000556993 DNAJC5Q9H3Z4 198 aa14.44□□□□□ -0.1
SUSD6-203ENST00000556993 CFTRP13569 1480 aa14.38□□□□□ -0.11
SUSD6-203ENST00000556993 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
SUSD6-203ENST00000556993 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
SUSD6-203ENST00000556993 WDR62O43379 1518 aa14.35□□□□□ -0.11
SUSD6-203ENST00000556993 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
SUSD6-203ENST00000556993 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
SUSD6-203ENST00000556993 ADRA2BP18089 450 aa14.26□□□□□ -0.13
SUSD6-203ENST00000556993 PIAS4Q8N2W9 510 aaPredicted RBP14.26□□□□□ -0.13
SUSD6-203ENST00000556993 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
SUSD6-203ENST00000556993 PPP6R1Q9UPN7 881 aa14.25□□□□□ -0.13
SUSD6-203ENST00000556993 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
SUSD6-203ENST00000556993 MSH5O43196 834 aa14.16□□□□□ -0.14
SUSD6-203ENST00000556993 ABCC8Q09428 1581 aa14.11□□□□□ -0.15
SUSD6-203ENST00000556993 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
SUSD6-203ENST00000556993 IFT140Q96RY7 1462 aa14.08□□□□□ -0.16
SUSD6-203ENST00000556993 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
SUSD6-203ENST00000556993 ZNF608Q9ULD9 1512 aaPredicted RBP13.99□□□□□ -0.17
SUSD6-203ENST00000556993 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
SUSD6-203ENST00000556993 POLA1P09884 1462 aaPredicted RBP13.95□□□□□ -0.18
SUSD6-203ENST00000556993 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
SUSD6-203ENST00000556993 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
SUSD6-203ENST00000556993 SUPT5HO00267 1087 aaKnown RBP13.93□□□□□ -0.18
SUSD6-203ENST00000556993 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
SUSD6-203ENST00000556993 CUX1P39880 1505 aa13.88□□□□□ -0.19
SUSD6-203ENST00000556993 SOGA1O94964 1423 aa13.88□□□□□ -0.19
SUSD6-203ENST00000556993 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■■■■■ 32.3
SUSD6-203ENST00000556993 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
SUSD6-203ENST00000556993 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
SUSD6-203ENST00000556993 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
SUSD6-203ENST00000556993 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
SUSD6-203ENST00000556993 CHD1O14646 1710 aa13.78□□□□□ -0.2
SUSD6-203ENST00000556993 GRIN2BQ13224 1484 aa13.77□□□□□ -0.21
SUSD6-203ENST00000556993 MAGI1Q96QZ7 1491 aaPredicted RBP13.77□□□□□ -0.21
SUSD6-203ENST00000556993 RIMBP3CA6NJZ7 1639 aa13.76□□□□□ -0.21
SUSD6-203ENST00000556993 RIMBP3BA6NNM3 1639 aa13.76□□□□□ -0.21
SUSD6-203ENST00000556993 RIMBP3Q9UFD9 1639 aa13.76□□□□□ -0.21
SUSD6-203ENST00000556993 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
SUSD6-203ENST00000556993 ARHGEF11O15085 1522 aa13.75□□□□□ -0.21
SUSD6-203ENST00000556993 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
SUSD6-203ENST00000556993 FBLN2P98095 1184 aa13.73□□□□□ -0.21
SUSD6-203ENST00000556993 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
SUSD6-203ENST00000556993 WRNQ14191 1432 aaPredicted RBP eCLIP13.72□□□□□ -0.21
SUSD6-203ENST00000556993 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
SUSD6-203ENST00000556993 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
SUSD6-203ENST00000556993 ABCA5Q8WWZ7 1642 aa13.71□□□□□ -0.22
SUSD6-203ENST00000556993 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
SUSD6-203ENST00000556993 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
SUSD6-203ENST00000556993 CHMP7Q8WUX9 453 aaPredicted RBP13.69□□□□□ -0.22
SUSD6-203ENST00000556993 SYNJ1O43426 1573 aa13.68□□□□□ -0.22
SUSD6-203ENST00000556993 CLASP1Q7Z460 1538 aa13.67□□□□□ -0.22
SUSD6-203ENST00000556993 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
SUSD6-203ENST00000556993 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
SUSD6-203ENST00000556993 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
SUSD6-203ENST00000556993 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
SUSD6-203ENST00000556993 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms