RNA–Protein interactions for RNA: ENST00000556953.1

NGDN-212, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-212ENST00000556953 NISCHQ9Y2I1 1504 aa28.96■■■□□ 2.23
NGDN-212ENST00000556953 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
NGDN-212ENST00000556953 ABCC9O60706 1549 aa25.34■■□□□ 1.65
NGDN-212ENST00000556953 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
NGDN-212ENST00000556953 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
NGDN-212ENST00000556953 NACADO15069 1562 aa24.31■■□□□ 1.48
NGDN-212ENST00000556953 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
NGDN-212ENST00000556953 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
NGDN-212ENST00000556953 ZCCHC6Q5VYS8 1495 aaKnown RBP24.1■■□□□ 1.45
NGDN-212ENST00000556953 DCAF1Q9Y4B6 1507 aa23.98■■□□□ 1.43
NGDN-212ENST00000556953 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
NGDN-212ENST00000556953 UNC13AQ9UPW8 1703 aa23.75■■□□□ 1.39
NGDN-212ENST00000556953 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
NGDN-212ENST00000556953 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
NGDN-212ENST00000556953 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
NGDN-212ENST00000556953 SHROOM4Q9ULL8 1493 aa23.4■■□□□ 1.34
NGDN-212ENST00000556953 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
NGDN-212ENST00000556953 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
NGDN-212ENST00000556953 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
NGDN-212ENST00000556953 CECR2Q9BXF3 1484 aa22.8■■□□□ 1.24
NGDN-212ENST00000556953 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
NGDN-212ENST00000556953 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
NGDN-212ENST00000556953 NCAPD3P42695 1498 aa22.42■■□□□ 1.18
NGDN-212ENST00000556953 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
NGDN-212ENST00000556953 SMARCA2P51531 1590 aa22.39■■□□□ 1.18
NGDN-212ENST00000556953 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
NGDN-212ENST00000556953 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
NGDN-212ENST00000556953 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
NGDN-212ENST00000556953 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
NGDN-212ENST00000556953 WIZO95785 1651 aa22.04■■□□□ 1.12
NGDN-212ENST00000556953 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
NGDN-212ENST00000556953 ERCC6Q03468 1493 aa21.89■■□□□ 1.09
NGDN-212ENST00000556953 NESP48681 1621 aa21.88■■□□□ 1.09
NGDN-212ENST00000556953 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
NGDN-212ENST00000556953 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.09
NGDN-212ENST00000556953 CADPSQ9ULU8 1353 aa21.76■■□□□ 1.07
NGDN-212ENST00000556953 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
NGDN-212ENST00000556953 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
NGDN-212ENST00000556953 CUX2O14529 1486 aa21.71■■□□□ 1.07
NGDN-212ENST00000556953 KIF21AQ7Z4S6 1674 aa21.62■■□□□ 1.05
NGDN-212ENST00000556953 CFTRP13569 1480 aa21.6■■□□□ 1.05
NGDN-212ENST00000556953 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
NGDN-212ENST00000556953 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
NGDN-212ENST00000556953 FANCD2Q9BXW9 1451 aa21.51■■□□□ 1.03
NGDN-212ENST00000556953 CEP164Q9UPV0 1460 aa21.5■■□□□ 1.03
NGDN-212ENST00000556953 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
NGDN-212ENST00000556953 WDR62O43379 1518 aa21.42■■□□□ 1.02
NGDN-212ENST00000556953 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
NGDN-212ENST00000556953 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
NGDN-212ENST00000556953 SUPT5HO00267 1087 aaKnown RBP21.35■■□□□ 1.01
NGDN-212ENST00000556953 URB2Q14146 1524 aaKnown RBP21.28■■□□□ 1
NGDN-212ENST00000556953 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
NGDN-212ENST00000556953 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
NGDN-212ENST00000556953 TOPBP1Q92547 1522 aa21.14■□□□□ 0.98
NGDN-212ENST00000556953 DNMBPQ6XZF7 1577 aa21.11■□□□□ 0.97
NGDN-212ENST00000556953 IFT140Q96RY7 1462 aa21.06■□□□□ 0.96
NGDN-212ENST00000556953 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
NGDN-212ENST00000556953 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
NGDN-212ENST00000556953 CUX1P39880 1505 aa20.93■□□□□ 0.94
NGDN-212ENST00000556953 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
NGDN-212ENST00000556953 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
NGDN-212ENST00000556953 SOGA1O94964 1423 aa20.88■□□□□ 0.93
NGDN-212ENST00000556953 EIF4G3O43432 1585 aaKnown RBP20.86■□□□□ 0.93
NGDN-212ENST00000556953 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
NGDN-212ENST00000556953 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.924e-7■■■■■ 36
NGDN-212ENST00000556953 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
NGDN-212ENST00000556953 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
NGDN-212ENST00000556953 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
NGDN-212ENST00000556953 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
NGDN-212ENST00000556953 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
NGDN-212ENST00000556953 BIVM-ERCC5R4GMW8 1640 aa20.72■□□□□ 0.91
NGDN-212ENST00000556953 SYNJ1O43426 1573 aa20.7■□□□□ 0.9
NGDN-212ENST00000556953 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
NGDN-212ENST00000556953 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
NGDN-212ENST00000556953 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
NGDN-212ENST00000556953 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
NGDN-212ENST00000556953 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
NGDN-212ENST00000556953 CHD1O14646 1710 aa20.61■□□□□ 0.89
NGDN-212ENST00000556953 ABCA5Q8WWZ7 1642 aa20.6■□□□□ 0.89
NGDN-212ENST00000556953 FBLN2P98095 1184 aa20.6■□□□□ 0.89
NGDN-212ENST00000556953 PBRM1Q86U86 1689 aa20.58■□□□□ 0.88
NGDN-212ENST00000556953 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
NGDN-212ENST00000556953 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
NGDN-212ENST00000556953 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
NGDN-212ENST00000556953 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
NGDN-212ENST00000556953 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
NGDN-212ENST00000556953 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
NGDN-212ENST00000556953 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
NGDN-212ENST00000556953 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
NGDN-212ENST00000556953 FHAD1B1AJZ9 1412 aa20.4■□□□□ 0.86
NGDN-212ENST00000556953 CLASP1Q7Z460 1538 aa20.4■□□□□ 0.86
NGDN-212ENST00000556953 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
NGDN-212ENST00000556953 GRIN2AQ12879 1464 aa20.38■□□□□ 0.85
NGDN-212ENST00000556953 KIF27Q86VH2 1401 aa20.36■□□□□ 0.85
NGDN-212ENST00000556953 NUP160Q12769 1436 aa20.29■□□□□ 0.84
NGDN-212ENST00000556953 IGF1RP08069 1367 aa20.28■□□□□ 0.84
NGDN-212ENST00000556953 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
NGDN-212ENST00000556953 CYB5RLQ6IPT4 315 aa20.25■□□□□ 0.83
NGDN-212ENST00000556953 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
NGDN-212ENST00000556953 CUL7Q14999 1698 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms