RNA–Protein interactions for RNA: ENST00000556913.1

LINC01588-212, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2

Gene LINC01588, Length 2,460 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-212ENST00000556913 NISCHQ9Y2I1 1504 aa21.25■□□□□ 0.99
LINC01588-212ENST00000556913 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
LINC01588-212ENST00000556913 ZCCHC6Q5VYS8 1495 aaKnown RBP17.83■□□□□ 0.45
LINC01588-212ENST00000556913 DCAF8L2P0C7V8 631 aa17.67■□□□□ 0.42
LINC01588-212ENST00000556913 ABCC9O60706 1549 aa17.66■□□□□ 0.42
LINC01588-212ENST00000556913 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
LINC01588-212ENST00000556913 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
LINC01588-212ENST00000556913 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
LINC01588-212ENST00000556913 NACADO15069 1562 aa17.26■□□□□ 0.35
LINC01588-212ENST00000556913 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
LINC01588-212ENST00000556913 SCRIBQ14160 1630 aa17.15■□□□□ 0.34
LINC01588-212ENST00000556913 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.3
LINC01588-212ENST00000556913 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
LINC01588-212ENST00000556913 BICRAQ9NZM4 1560 aa16.68■□□□□ 0.26
LINC01588-212ENST00000556913 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.26
LINC01588-212ENST00000556913 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
LINC01588-212ENST00000556913 RSF1Q96T23 1441 aaPredicted RBP16.47■□□□□ 0.23
LINC01588-212ENST00000556913 MROH2BQ7Z745 1585 aa16.46■□□□□ 0.23
LINC01588-212ENST00000556913 BAZ1AQ9NRL2 1556 aaPredicted RBP16.41■□□□□ 0.22
LINC01588-212ENST00000556913 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
LINC01588-212ENST00000556913 WIZO95785 1651 aa16.37■□□□□ 0.21
LINC01588-212ENST00000556913 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
LINC01588-212ENST00000556913 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
LINC01588-212ENST00000556913 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
LINC01588-212ENST00000556913 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.17
LINC01588-212ENST00000556913 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
LINC01588-212ENST00000556913 BAZ1BQ9UIG0 1483 aaKnown RBP16.01■□□□□ 0.15
LINC01588-212ENST00000556913 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
LINC01588-212ENST00000556913 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.15
LINC01588-212ENST00000556913 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
LINC01588-212ENST00000556913 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
LINC01588-212ENST00000556913 HMGXB3Q12766 1538 aa15.91■□□□□ 0.14
LINC01588-212ENST00000556913 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
LINC01588-212ENST00000556913 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
LINC01588-212ENST00000556913 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
LINC01588-212ENST00000556913 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
LINC01588-212ENST00000556913 CFTRP13569 1480 aa15.57■□□□□ 0.08
LINC01588-212ENST00000556913 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.08
LINC01588-212ENST00000556913 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
LINC01588-212ENST00000556913 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
LINC01588-212ENST00000556913 NESP48681 1621 aa15.5■□□□□ 0.07
LINC01588-212ENST00000556913 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
LINC01588-212ENST00000556913 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
LINC01588-212ENST00000556913 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
LINC01588-212ENST00000556913 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
LINC01588-212ENST00000556913 FANCD2Q9BXW9 1451 aa15.39■□□□□ 0.05
LINC01588-212ENST00000556913 CUX1P39880 1505 aa15.38■□□□□ 0.05
LINC01588-212ENST00000556913 LOC105371045A0A1W2PR82 267 aa15.37■□□□□ 0.05
LINC01588-212ENST00000556913 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
LINC01588-212ENST00000556913 SOGA1O94964 1423 aa15.34■□□□□ 0.05
LINC01588-212ENST00000556913 RUSC2Q8N2Y8 1516 aa15.32■□□□□ 0.04
LINC01588-212ENST00000556913 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
LINC01588-212ENST00000556913 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
LINC01588-212ENST00000556913 PDS5BQ9NTI5 1447 aa15.28■□□□□ 0.04
LINC01588-212ENST00000556913 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
LINC01588-212ENST00000556913 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
LINC01588-212ENST00000556913 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
LINC01588-212ENST00000556913 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
LINC01588-212ENST00000556913 EEA1Q15075 1411 aa15.19■□□□□ 0.02
LINC01588-212ENST00000556913 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
LINC01588-212ENST00000556913 POLA1P09884 1462 aaPredicted RBP15.15■□□□□ 0.02
LINC01588-212ENST00000556913 RAD54L2Q9Y4B4 1467 aa15.13■□□□□ 0.01
LINC01588-212ENST00000556913 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
LINC01588-212ENST00000556913 CUX2O14529 1486 aa15.11■□□□□ 0.01
LINC01588-212ENST00000556913 MRC2Q9UBG0 1479 aa15.1■□□□□ 0.01
LINC01588-212ENST00000556913 KIF27Q86VH2 1401 aa15.1■□□□□ 0.01
LINC01588-212ENST00000556913 WDR97A6NE52 1622 aa15.07■□□□□ 0
LINC01588-212ENST00000556913 KIF21BO75037 1637 aa15.07■□□□□ 0
LINC01588-212ENST00000556913 GOLGA3Q08378 1498 aa15.04■□□□□ -0
LINC01588-212ENST00000556913 THOC2Q8NI27 1593 aaKnown RBP15.04■□□□□ -0
LINC01588-212ENST00000556913 ABCA10Q8WWZ4 1543 aa15.04■□□□□ -0
LINC01588-212ENST00000556913 WDR62O43379 1518 aa15.03■□□□□ -0
LINC01588-212ENST00000556913 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
LINC01588-212ENST00000556913 UBTFP17480 764 aaKnown RBP15.03■□□□□ -0
LINC01588-212ENST00000556913 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
LINC01588-212ENST00000556913 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
LINC01588-212ENST00000556913 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
LINC01588-212ENST00000556913 IGF1RP08069 1367 aa14.97□□□□□ -0.01
LINC01588-212ENST00000556913 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
LINC01588-212ENST00000556913 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.02
LINC01588-212ENST00000556913 ERICH3Q5RHP9 1530 aa14.95□□□□□ -0.02
LINC01588-212ENST00000556913 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
LINC01588-212ENST00000556913 GAPVD1Q14C86 1478 aa14.92□□□□□ -0.02
LINC01588-212ENST00000556913 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
LINC01588-212ENST00000556913 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
LINC01588-212ENST00000556913 ZNF608Q9ULD9 1512 aaPredicted RBP14.89□□□□□ -0.03
LINC01588-212ENST00000556913 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
LINC01588-212ENST00000556913 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
LINC01588-212ENST00000556913 CUL7Q14999 1698 aa14.89□□□□□ -0.03
LINC01588-212ENST00000556913 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
LINC01588-212ENST00000556913 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
LINC01588-212ENST00000556913 CLIP1P30622 1438 aa14.81□□□□□ -0.04
LINC01588-212ENST00000556913 CTTNBP2Q8WZ74 1663 aa14.79□□□□□ -0.04
LINC01588-212ENST00000556913 GRIN2BQ13224 1484 aa14.78□□□□□ -0.04
LINC01588-212ENST00000556913 ADAMTS12P58397 1594 aa14.78□□□□□ -0.04
LINC01588-212ENST00000556913 SNAPC4Q5SXM2 1469 aa14.74□□□□□ -0.05
LINC01588-212ENST00000556913 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
LINC01588-212ENST00000556913 PPARGC1BQ86YN6 1023 aaKnown RBP14.72□□□□□ -0.05
LINC01588-212ENST00000556913 ARHGAP35Q9NRY4 1499 aa14.69□□□□□ -0.06
LINC01588-212ENST00000556913 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms