RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
EFCAB11-212ENST00000556639 CCDC180Q9P1Z9 1646 aa27.35■■□□□ 1.97
EFCAB11-212ENST00000556639 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
EFCAB11-212ENST00000556639 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
EFCAB11-212ENST00000556639 ABCC9O60706 1549 aa26.15■■□□□ 1.78
EFCAB11-212ENST00000556639 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.74
EFCAB11-212ENST00000556639 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
EFCAB11-212ENST00000556639 MYO15BQ96JP2 1530 aa25.57■■□□□ 1.68
EFCAB11-212ENST00000556639 NACADO15069 1562 aa25.51■■□□□ 1.67
EFCAB11-212ENST00000556639 RB1CC1Q8TDY2 1594 aa25.33■■□□□ 1.65
EFCAB11-212ENST00000556639 SCRIBQ14160 1630 aa25.33■■□□□ 1.64
EFCAB11-212ENST00000556639 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
EFCAB11-212ENST00000556639 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
EFCAB11-212ENST00000556639 PABPN1Q86U42 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
EFCAB11-212ENST00000556639 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
EFCAB11-212ENST00000556639 CECR2Q9BXF3 1484 aa24.57■■□□□ 1.52
EFCAB11-212ENST00000556639 RSF1Q96T23 1441 aaPredicted RBP24.43■■□□□ 1.5
EFCAB11-212ENST00000556639 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
EFCAB11-212ENST00000556639 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
EFCAB11-212ENST00000556639 SMARCA4P51532 1647 aa24.2■■□□□ 1.46
EFCAB11-212ENST00000556639 WIZO95785 1651 aa24.19■■□□□ 1.46
EFCAB11-212ENST00000556639 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
EFCAB11-212ENST00000556639 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
EFCAB11-212ENST00000556639 PEG3Q9GZU2 1588 aa23.83■■□□□ 1.41
EFCAB11-212ENST00000556639 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.4
EFCAB11-212ENST00000556639 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
EFCAB11-212ENST00000556639 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
EFCAB11-212ENST00000556639 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
EFCAB11-212ENST00000556639 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
EFCAB11-212ENST00000556639 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
EFCAB11-212ENST00000556639 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
EFCAB11-212ENST00000556639 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
EFCAB11-212ENST00000556639 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
EFCAB11-212ENST00000556639 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
EFCAB11-212ENST00000556639 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
EFCAB11-212ENST00000556639 CFTRP13569 1480 aa23.08■■□□□ 1.28
EFCAB11-212ENST00000556639 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
EFCAB11-212ENST00000556639 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
EFCAB11-212ENST00000556639 NESP48681 1621 aa22.96■■□□□ 1.27
EFCAB11-212ENST00000556639 FAM9AQ8IZU1 332 aaPredicted RBP22.94■■□□□ 1.26
EFCAB11-212ENST00000556639 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
EFCAB11-212ENST00000556639 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
EFCAB11-212ENST00000556639 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
EFCAB11-212ENST00000556639 FANCD2Q9BXW9 1451 aa22.78■■□□□ 1.24
EFCAB11-212ENST00000556639 CUX1P39880 1505 aa22.78■■□□□ 1.24
EFCAB11-212ENST00000556639 LAMC3Q9Y6N6 1575 aa22.77■■□□□ 1.24
EFCAB11-212ENST00000556639 SOGA1O94964 1423 aa22.76■■□□□ 1.23
EFCAB11-212ENST00000556639 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
EFCAB11-212ENST00000556639 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
EFCAB11-212ENST00000556639 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
EFCAB11-212ENST00000556639 BIVM-ERCC5R4GMW8 1640 aa22.72■■□□□ 1.23
EFCAB11-212ENST00000556639 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
EFCAB11-212ENST00000556639 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
EFCAB11-212ENST00000556639 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
EFCAB11-212ENST00000556639 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
EFCAB11-212ENST00000556639 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
EFCAB11-212ENST00000556639 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
EFCAB11-212ENST00000556639 CSRNP3Q8WYN3 585 aa22.52■■□□□ 1.2
EFCAB11-212ENST00000556639 DNMBPQ6XZF7 1577 aa22.52■■□□□ 1.2
EFCAB11-212ENST00000556639 EEA1Q15075 1411 aa22.48■■□□□ 1.19
EFCAB11-212ENST00000556639 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
EFCAB11-212ENST00000556639 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
EFCAB11-212ENST00000556639 CUX2O14529 1486 aa22.38■■□□□ 1.17
EFCAB11-212ENST00000556639 KIF27Q86VH2 1401 aa22.36■■□□□ 1.17
EFCAB11-212ENST00000556639 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
EFCAB11-212ENST00000556639 MRC2Q9UBG0 1479 aa22.35■■□□□ 1.17
EFCAB11-212ENST00000556639 ABCA10Q8WWZ4 1543 aa22.27■■□□□ 1.16
EFCAB11-212ENST00000556639 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
EFCAB11-212ENST00000556639 RAPGEF2Q9Y4G8 1499 aa22.27■■□□□ 1.15
EFCAB11-212ENST00000556639 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
EFCAB11-212ENST00000556639 KIF21BO75037 1637 aa22.25■■□□□ 1.15
EFCAB11-212ENST00000556639 IGF1RP08069 1367 aa22.24■■□□□ 1.15
EFCAB11-212ENST00000556639 WDR62O43379 1518 aa22.23■■□□□ 1.15
EFCAB11-212ENST00000556639 TDRD9Q8NDG6 1382 aaKnown RBP22.22■■□□□ 1.15
EFCAB11-212ENST00000556639 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
EFCAB11-212ENST00000556639 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
EFCAB11-212ENST00000556639 WDR97A6NE52 1622 aa22.21■■□□□ 1.15
EFCAB11-212ENST00000556639 TARBP1Q13395 1621 aaKnown RBP22.19■■□□□ 1.14
EFCAB11-212ENST00000556639 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
EFCAB11-212ENST00000556639 CEP162Q5TB80 1403 aa22.11■■□□□ 1.13
EFCAB11-212ENST00000556639 CARMIL1Q5VZK9 1371 aa22.1■■□□□ 1.13
EFCAB11-212ENST00000556639 ABCA5Q8WWZ7 1642 aa22.1■■□□□ 1.13
EFCAB11-212ENST00000556639 ERICH3Q5RHP9 1530 aa22.1■■□□□ 1.13
EFCAB11-212ENST00000556639 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
EFCAB11-212ENST00000556639 AQRO60306 1485 aaKnown RBP eCLIP22.09■■□□□ 1.13
EFCAB11-212ENST00000556639 RANGAP1P46060 587 aaPredicted RBP22.08■■□□□ 1.12
EFCAB11-212ENST00000556639 ZNF608Q9ULD9 1512 aaPredicted RBP22.07■■□□□ 1.12
EFCAB11-212ENST00000556639 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
EFCAB11-212ENST00000556639 CUL7Q14999 1698 aa21.95■■□□□ 1.1
EFCAB11-212ENST00000556639 PBRM1Q86U86 1689 aa21.95■■□□□ 1.1
EFCAB11-212ENST00000556639 CLIP1P30622 1438 aa21.94■■□□□ 1.1
EFCAB11-212ENST00000556639 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
EFCAB11-212ENST00000556639 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
EFCAB11-212ENST00000556639 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
EFCAB11-212ENST00000556639 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
EFCAB11-212ENST00000556639 FHAD1B1AJZ9 1412 aa21.81■■□□□ 1.08
EFCAB11-212ENST00000556639 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
EFCAB11-212ENST00000556639 ARHGAP35Q9NRY4 1499 aa21.77■■□□□ 1.08
EFCAB11-212ENST00000556639 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
EFCAB11-212ENST00000556639 CTTNBP2Q8WZ74 1663 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms