RNA–Protein interactions for RNA: ENST00000556347.1

AL355916.3-201, humanhuman

APPRIS P1 TSL 4 BASIC

Gene AL355916.3, Length 779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355916.3-201ENST00000556347 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
AL355916.3-201ENST00000556347 NISCHQ9Y2I1 1504 aa23.79■■□□□ 1.4
AL355916.3-201ENST00000556347 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
AL355916.3-201ENST00000556347 ABCC9O60706 1549 aa21.82■■□□□ 1.08
AL355916.3-201ENST00000556347 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
AL355916.3-201ENST00000556347 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
AL355916.3-201ENST00000556347 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
AL355916.3-201ENST00000556347 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
AL355916.3-201ENST00000556347 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
AL355916.3-201ENST00000556347 NACADO15069 1562 aa20.42■□□□□ 0.86
AL355916.3-201ENST00000556347 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.83
AL355916.3-201ENST00000556347 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
AL355916.3-201ENST00000556347 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
AL355916.3-201ENST00000556347 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
AL355916.3-201ENST00000556347 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
AL355916.3-201ENST00000556347 FOXD1Q16676 465 aa19.97■□□□□ 0.79
AL355916.3-201ENST00000556347 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
AL355916.3-201ENST00000556347 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
AL355916.3-201ENST00000556347 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
AL355916.3-201ENST00000556347 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
AL355916.3-201ENST00000556347 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
AL355916.3-201ENST00000556347 EIF4G1Q04637 1599 aaKnown RBP19.63■□□□□ 0.73
AL355916.3-201ENST00000556347 SCRIBQ14160 1630 aa19.53■□□□□ 0.72
AL355916.3-201ENST00000556347 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
AL355916.3-201ENST00000556347 CUX2O14529 1486 aa19.03■□□□□ 0.64
AL355916.3-201ENST00000556347 NCAPD3P42695 1498 aa18.88■□□□□ 0.61
AL355916.3-201ENST00000556347 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
AL355916.3-201ENST00000556347 MSH5O43196 834 aa18.83■□□□□ 0.6
AL355916.3-201ENST00000556347 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
AL355916.3-201ENST00000556347 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
AL355916.3-201ENST00000556347 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
AL355916.3-201ENST00000556347 NESP48681 1621 aa18.68■□□□□ 0.58
AL355916.3-201ENST00000556347 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
AL355916.3-201ENST00000556347 SMARCA2P51531 1590 aa18.65■□□□□ 0.58
AL355916.3-201ENST00000556347 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
AL355916.3-201ENST00000556347 PIAS4Q8N2W9 510 aaPredicted RBP18.65■□□□□ 0.58
AL355916.3-201ENST00000556347 POTEDQ86YR6 584 aa18.62■□□□□ 0.57
AL355916.3-201ENST00000556347 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
AL355916.3-201ENST00000556347 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
AL355916.3-201ENST00000556347 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
AL355916.3-201ENST00000556347 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
AL355916.3-201ENST00000556347 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
AL355916.3-201ENST00000556347 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
AL355916.3-201ENST00000556347 ADRA2BP18089 450 aa18.45■□□□□ 0.54
AL355916.3-201ENST00000556347 MROH2BQ7Z745 1585 aa18.33■□□□□ 0.52
AL355916.3-201ENST00000556347 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
AL355916.3-201ENST00000556347 WDR62O43379 1518 aa18.28■□□□□ 0.52
AL355916.3-201ENST00000556347 MRC2Q9UBG0 1479 aa18.25■□□□□ 0.51
AL355916.3-201ENST00000556347 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
AL355916.3-201ENST00000556347 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
AL355916.3-201ENST00000556347 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
AL355916.3-201ENST00000556347 WIZO95785 1651 aa18.06■□□□□ 0.48
AL355916.3-201ENST00000556347 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
AL355916.3-201ENST00000556347 CFTRP13569 1480 aa18■□□□□ 0.47
AL355916.3-201ENST00000556347 URB2Q14146 1524 aaKnown RBP17.97■□□□□ 0.47
AL355916.3-201ENST00000556347 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
AL355916.3-201ENST00000556347 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
AL355916.3-201ENST00000556347 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
AL355916.3-201ENST00000556347 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
AL355916.3-201ENST00000556347 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
AL355916.3-201ENST00000556347 ARHGEF11O15085 1522 aa17.81■□□□□ 0.44
AL355916.3-201ENST00000556347 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
AL355916.3-201ENST00000556347 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
AL355916.3-201ENST00000556347 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
AL355916.3-201ENST00000556347 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
AL355916.3-201ENST00000556347 EIF4G3O43432 1585 aaKnown RBP17.68■□□□□ 0.42
AL355916.3-201ENST00000556347 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
AL355916.3-201ENST00000556347 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
AL355916.3-201ENST00000556347 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
AL355916.3-201ENST00000556347 CHD1O14646 1710 aa17.61■□□□□ 0.41
AL355916.3-201ENST00000556347 CCDC88BA6NC98 1476 aa17.59■□□□□ 0.41
AL355916.3-201ENST00000556347 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
AL355916.3-201ENST00000556347 ABCC8Q09428 1581 aa17.54■□□□□ 0.4
AL355916.3-201ENST00000556347 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
AL355916.3-201ENST00000556347 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.39
AL355916.3-201ENST00000556347 POLA1P09884 1462 aaPredicted RBP17.47■□□□□ 0.39
AL355916.3-201ENST00000556347 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
AL355916.3-201ENST00000556347 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
AL355916.3-201ENST00000556347 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
AL355916.3-201ENST00000556347 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
AL355916.3-201ENST00000556347 FBLN2P98095 1184 aa17.36■□□□□ 0.37
AL355916.3-201ENST00000556347 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
AL355916.3-201ENST00000556347 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
AL355916.3-201ENST00000556347 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
AL355916.3-201ENST00000556347 SYNJ1O43426 1573 aa17.3■□□□□ 0.36
AL355916.3-201ENST00000556347 SOGA1O94964 1423 aa17.29■□□□□ 0.36
AL355916.3-201ENST00000556347 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
AL355916.3-201ENST00000556347 CUX1P39880 1505 aa17.25■□□□□ 0.35
AL355916.3-201ENST00000556347 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
AL355916.3-201ENST00000556347 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
AL355916.3-201ENST00000556347 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
AL355916.3-201ENST00000556347 CHMP7Q8WUX9 453 aaPredicted RBP17.19■□□□□ 0.34
AL355916.3-201ENST00000556347 PBRM1Q86U86 1689 aa17.18■□□□□ 0.34
AL355916.3-201ENST00000556347 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
AL355916.3-201ENST00000556347 ERCC6L2Q5T890 1561 aa17.13■□□□□ 0.33
AL355916.3-201ENST00000556347 ABCA10Q8WWZ4 1543 aa17.09■□□□□ 0.33
AL355916.3-201ENST00000556347 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
AL355916.3-201ENST00000556347 NUP160Q12769 1436 aa17.04■□□□□ 0.32
AL355916.3-201ENST00000556347 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
AL355916.3-201ENST00000556347 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms