RNA–Protein interactions for RNA: ENST00000556116.1

LINC00639-203, long intergenic non-protein coding RNA 639, humanhuman

TSL 4

Gene LINC00639, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-203ENST00000556116 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
LINC00639-203ENST00000556116 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
LINC00639-203ENST00000556116 ABCC9O60706 1549 aa19.61■□□□□ 0.73
LINC00639-203ENST00000556116 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
LINC00639-203ENST00000556116 NACADO15069 1562 aa18.49■□□□□ 0.55
LINC00639-203ENST00000556116 DNAJC5BQ9UF47 199 aa18.42■□□□□ 0.54
LINC00639-203ENST00000556116 DCAF8L2P0C7V8 631 aa18.41■□□□□ 0.54
LINC00639-203ENST00000556116 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
LINC00639-203ENST00000556116 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
LINC00639-203ENST00000556116 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
LINC00639-203ENST00000556116 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
LINC00639-203ENST00000556116 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
LINC00639-203ENST00000556116 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
LINC00639-203ENST00000556116 SCRIBQ14160 1630 aa17.95■□□□□ 0.46
LINC00639-203ENST00000556116 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
LINC00639-203ENST00000556116 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
LINC00639-203ENST00000556116 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
LINC00639-203ENST00000556116 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
LINC00639-203ENST00000556116 SMARCA4P51532 1647 aa17.1■□□□□ 0.33
LINC00639-203ENST00000556116 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
LINC00639-203ENST00000556116 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
LINC00639-203ENST00000556116 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
LINC00639-203ENST00000556116 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
LINC00639-203ENST00000556116 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
LINC00639-203ENST00000556116 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
LINC00639-203ENST00000556116 NESP48681 1621 aa16.92■□□□□ 0.3
LINC00639-203ENST00000556116 PEG3Q9GZU2 1588 aa16.91■□□□□ 0.3
LINC00639-203ENST00000556116 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
LINC00639-203ENST00000556116 ERCC6Q03468 1493 aa16.82■□□□□ 0.28
LINC00639-203ENST00000556116 CUX2O14529 1486 aa16.77■□□□□ 0.28
LINC00639-203ENST00000556116 WIZO95785 1651 aa16.77■□□□□ 0.28
LINC00639-203ENST00000556116 DNAJC5Q9H3Z4 198 aa16.72■□□□□ 0.27
LINC00639-203ENST00000556116 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
LINC00639-203ENST00000556116 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
LINC00639-203ENST00000556116 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
LINC00639-203ENST00000556116 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.24
LINC00639-203ENST00000556116 CADPSQ9ULU8 1353 aa16.56■□□□□ 0.24
LINC00639-203ENST00000556116 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
LINC00639-203ENST00000556116 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
LINC00639-203ENST00000556116 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
LINC00639-203ENST00000556116 WDR62O43379 1518 aa16.45■□□□□ 0.22
LINC00639-203ENST00000556116 CFTRP13569 1480 aa16.42■□□□□ 0.22
LINC00639-203ENST00000556116 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
LINC00639-203ENST00000556116 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
LINC00639-203ENST00000556116 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
LINC00639-203ENST00000556116 CCDC88BA6NC98 1476 aa16.32■□□□□ 0.2
LINC00639-203ENST00000556116 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
LINC00639-203ENST00000556116 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
LINC00639-203ENST00000556116 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
LINC00639-203ENST00000556116 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
LINC00639-203ENST00000556116 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
LINC00639-203ENST00000556116 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
LINC00639-203ENST00000556116 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
LINC00639-203ENST00000556116 EIF4G3O43432 1585 aaKnown RBP16.02■□□□□ 0.16
LINC00639-203ENST00000556116 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
LINC00639-203ENST00000556116 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
LINC00639-203ENST00000556116 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
LINC00639-203ENST00000556116 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.14
LINC00639-203ENST00000556116 ABCC8Q09428 1581 aa15.96■□□□□ 0.14
LINC00639-203ENST00000556116 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
LINC00639-203ENST00000556116 CHD1O14646 1710 aa15.92■□□□□ 0.14
LINC00639-203ENST00000556116 CUX1P39880 1505 aa15.92■□□□□ 0.14
LINC00639-203ENST00000556116 RIMBP3CA6NJZ7 1639 aa15.91■□□□□ 0.14
LINC00639-203ENST00000556116 RIMBP3BA6NNM3 1639 aa15.91■□□□□ 0.14
LINC00639-203ENST00000556116 RIMBP3Q9UFD9 1639 aa15.91■□□□□ 0.14
LINC00639-203ENST00000556116 FGD5Q6ZNL6 1462 aa15.88■□□□□ 0.13
LINC00639-203ENST00000556116 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
LINC00639-203ENST00000556116 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
LINC00639-203ENST00000556116 SOGA1O94964 1423 aa15.84■□□□□ 0.13
LINC00639-203ENST00000556116 ARHGEF11O15085 1522 aa15.84■□□□□ 0.13
LINC00639-203ENST00000556116 WDR97A6NE52 1622 aa15.83■□□□□ 0.12
LINC00639-203ENST00000556116 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
LINC00639-203ENST00000556116 FBLN2P98095 1184 aa15.74■□□□□ 0.11
LINC00639-203ENST00000556116 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
LINC00639-203ENST00000556116 ARAP1Q96P48 1450 aa15.71■□□□□ 0.11
LINC00639-203ENST00000556116 CLASP1Q7Z460 1538 aa15.7■□□□□ 0.1
LINC00639-203ENST00000556116 ABCA5Q8WWZ7 1642 aa15.69■□□□□ 0.1
LINC00639-203ENST00000556116 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
LINC00639-203ENST00000556116 GRIN2BQ13224 1484 aa15.68■□□□□ 0.1
LINC00639-203ENST00000556116 CYB5RLQ6IPT4 315 aa15.67■□□□□ 0.1
LINC00639-203ENST00000556116 ABCA10Q8WWZ4 1543 aa15.67■□□□□ 0.1
LINC00639-203ENST00000556116 GAPVD1Q14C86 1478 aa15.66■□□□□ 0.1
LINC00639-203ENST00000556116 MAGI1Q96QZ7 1491 aaPredicted RBP15.66■□□□□ 0.1
LINC00639-203ENST00000556116 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
LINC00639-203ENST00000556116 SYNJ2O15056 1496 aa15.64■□□□□ 0.09
LINC00639-203ENST00000556116 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
LINC00639-203ENST00000556116 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
LINC00639-203ENST00000556116 WRNQ14191 1432 aaPredicted RBP eCLIP15.59■□□□□ 0.09
LINC00639-203ENST00000556116 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
LINC00639-203ENST00000556116 ERCC6L2Q5T890 1561 aa15.55■□□□□ 0.08
LINC00639-203ENST00000556116 CEP170Q5SW79 1584 aa15.53■□□□□ 0.08
LINC00639-203ENST00000556116 GRIN2AQ12879 1464 aa15.52■□□□□ 0.08
LINC00639-203ENST00000556116 NUP160Q12769 1436 aa15.47■□□□□ 0.07
LINC00639-203ENST00000556116 CHIC1Q5VXU3 224 aa15.46■□□□□ 0.07
LINC00639-203ENST00000556116 ERICH3Q5RHP9 1530 aa15.45■□□□□ 0.06
LINC00639-203ENST00000556116 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
LINC00639-203ENST00000556116 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
LINC00639-203ENST00000556116 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
LINC00639-203ENST00000556116 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
LINC00639-203ENST00000556116 IGF1RP08069 1367 aa15.3■□□□□ 0.04
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