RNA–Protein interactions for RNA: ENST00000556077.5

TTC8-211, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 5

Gene TTC8, Length 1,020 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-211ENST00000556077 NISCHQ9Y2I1 1504 aa34.12■■■■□ 3.05
TTC8-211ENST00000556077 ABCC9O60706 1549 aa31.01■■■□□ 2.55
TTC8-211ENST00000556077 CCDC180Q9P1Z9 1646 aa30.73■■■□□ 2.51
TTC8-211ENST00000556077 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
TTC8-211ENST00000556077 DNAJC5BQ9UF47 199 aa29.38■■■□□ 2.29
TTC8-211ENST00000556077 NACADO15069 1562 aa29.22■■■□□ 2.27
TTC8-211ENST00000556077 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
TTC8-211ENST00000556077 PABPN1Q86U42 306 aaKnown RBP eCLIP28.87■■■□□ 2.21
TTC8-211ENST00000556077 MYO15BQ96JP2 1530 aa28.75■■■□□ 2.19
TTC8-211ENST00000556077 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
TTC8-211ENST00000556077 BICRAQ9NZM4 1560 aa28.48■■■□□ 2.15
TTC8-211ENST00000556077 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
TTC8-211ENST00000556077 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
TTC8-211ENST00000556077 ZCCHC6Q5VYS8 1495 aaKnown RBP28.16■■■□□ 2.1
TTC8-211ENST00000556077 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
TTC8-211ENST00000556077 CC2D2AQ9P2K1 1620 aa28■■■□□ 2.07
TTC8-211ENST00000556077 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
TTC8-211ENST00000556077 EIF4G1Q04637 1599 aaKnown RBP27.87■■■□□ 2.05
TTC8-211ENST00000556077 DNAJC5Q9H3Z4 198 aa27.37■■□□□ 1.97
TTC8-211ENST00000556077 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
TTC8-211ENST00000556077 CUX2O14529 1486 aa26.98■■□□□ 1.91
TTC8-211ENST00000556077 ERCC6Q03468 1493 aa26.9■■□□□ 1.9
TTC8-211ENST00000556077 ATAD2BQ9ULI0 1458 aa26.8■■□□□ 1.88
TTC8-211ENST00000556077 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
TTC8-211ENST00000556077 HMGXB3Q12766 1538 aa26.7■■□□□ 1.86
TTC8-211ENST00000556077 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
TTC8-211ENST00000556077 BAZ1BQ9UIG0 1483 aaKnown RBP26.54■■□□□ 1.84
TTC8-211ENST00000556077 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
TTC8-211ENST00000556077 NESP48681 1621 aa26.5■■□□□ 1.83
TTC8-211ENST00000556077 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
TTC8-211ENST00000556077 LAMC3Q9Y6N6 1575 aa26.4■■□□□ 1.82
TTC8-211ENST00000556077 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
TTC8-211ENST00000556077 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
TTC8-211ENST00000556077 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
TTC8-211ENST00000556077 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
TTC8-211ENST00000556077 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
TTC8-211ENST00000556077 MRC2Q9UBG0 1479 aa26.03■■□□□ 1.76
TTC8-211ENST00000556077 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
TTC8-211ENST00000556077 WDR62O43379 1518 aa25.93■■□□□ 1.74
TTC8-211ENST00000556077 CEP164Q9UPV0 1460 aa25.87■■□□□ 1.73
TTC8-211ENST00000556077 WIZO95785 1651 aa25.86■■□□□ 1.73
TTC8-211ENST00000556077 FANCD2Q9BXW9 1451 aa25.8■■□□□ 1.72
TTC8-211ENST00000556077 OSCARQ8IYS5 282 aa25.8■■□□□ 1.72
TTC8-211ENST00000556077 CFTRP13569 1480 aa25.76■■□□□ 1.71
TTC8-211ENST00000556077 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
TTC8-211ENST00000556077 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.68
TTC8-211ENST00000556077 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
TTC8-211ENST00000556077 IFT140Q96RY7 1462 aa25.4■■□□□ 1.66
TTC8-211ENST00000556077 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
TTC8-211ENST00000556077 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
TTC8-211ENST00000556077 CCDC88BA6NC98 1476 aa25.32■■□□□ 1.64
TTC8-211ENST00000556077 ZNF608Q9ULD9 1512 aaPredicted RBP25.26■■□□□ 1.63
TTC8-211ENST00000556077 RIMBP3CA6NJZ7 1639 aa25.26■■□□□ 1.63
TTC8-211ENST00000556077 RIMBP3BA6NNM3 1639 aa25.26■■□□□ 1.63
TTC8-211ENST00000556077 RIMBP3Q9UFD9 1639 aa25.26■■□□□ 1.63
TTC8-211ENST00000556077 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
TTC8-211ENST00000556077 ARHGEF11O15085 1522 aa25.19■■□□□ 1.62
TTC8-211ENST00000556077 CYB5RLQ6IPT4 315 aa25.15■■□□□ 1.62
TTC8-211ENST00000556077 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
TTC8-211ENST00000556077 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
TTC8-211ENST00000556077 FBLN2P98095 1184 aa25.07■■□□□ 1.6
TTC8-211ENST00000556077 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.6
TTC8-211ENST00000556077 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
TTC8-211ENST00000556077 TRHP20396 242 aaPredicted RBP25■■□□□ 1.59
TTC8-211ENST00000556077 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
TTC8-211ENST00000556077 SOGA1O94964 1423 aa24.95■■□□□ 1.58
TTC8-211ENST00000556077 CHD1O14646 1710 aa24.94■■□□□ 1.58
TTC8-211ENST00000556077 ARAP1Q96P48 1450 aa24.89■■□□□ 1.57
TTC8-211ENST00000556077 CHMP7Q8WUX9 453 aaPredicted RBP24.88■■□□□ 1.57
TTC8-211ENST00000556077 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
TTC8-211ENST00000556077 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
TTC8-211ENST00000556077 RAD54L2Q9Y4B4 1467 aa24.85■■□□□ 1.57
TTC8-211ENST00000556077 MAGI1Q96QZ7 1491 aaPredicted RBP24.78■■□□□ 1.56
TTC8-211ENST00000556077 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
TTC8-211ENST00000556077 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
TTC8-211ENST00000556077 SYNJ1O43426 1573 aa24.75■■□□□ 1.55
TTC8-211ENST00000556077 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
TTC8-211ENST00000556077 CLASP1Q7Z460 1538 aa24.7■■□□□ 1.54
TTC8-211ENST00000556077 SYNJ2O15056 1496 aa24.69■■□□□ 1.54
TTC8-211ENST00000556077 CUX1P39880 1505 aa24.65■■□□□ 1.54
TTC8-211ENST00000556077 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
TTC8-211ENST00000556077 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
TTC8-211ENST00000556077 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
TTC8-211ENST00000556077 PBRM1Q86U86 1689 aa24.47■■□□□ 1.51
TTC8-211ENST00000556077 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
TTC8-211ENST00000556077 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
TTC8-211ENST00000556077 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
TTC8-211ENST00000556077 NUP160Q12769 1436 aa24.32■■□□□ 1.48
TTC8-211ENST00000556077 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
TTC8-211ENST00000556077 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
TTC8-211ENST00000556077 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
TTC8-211ENST00000556077 ADAMTS12P58397 1594 aa24.24■■□□□ 1.47
TTC8-211ENST00000556077 ERICH3Q5RHP9 1530 aa24.22■■□□□ 1.47
TTC8-211ENST00000556077 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
TTC8-211ENST00000556077 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.47
TTC8-211ENST00000556077 JPH4Q96JJ6 628 aa24.19■■□□□ 1.46
TTC8-211ENST00000556077 SHROOM2Q13796 1616 aa24.19■■□□□ 1.46
TTC8-211ENST00000556077 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
TTC8-211ENST00000556077 NPM1P06748 294 aaKnown RBP eCLIP24.16■■□□□ 1.46
TTC8-211ENST00000556077 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms