RNA–Protein interactions for RNA: ENST00000556033.5

LINC01146-204, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 1 (best) BASIC

Gene LINC01146, Length 833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-204ENST00000556033 AEBP2Q6ZN18 517 aaPredicted RBP26.36■■□□□ 1.81
LINC01146-204ENST00000556033 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
LINC01146-204ENST00000556033 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
LINC01146-204ENST00000556033 ABCC9O60706 1549 aa22.74■■□□□ 1.23
LINC01146-204ENST00000556033 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
LINC01146-204ENST00000556033 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
LINC01146-204ENST00000556033 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
LINC01146-204ENST00000556033 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
LINC01146-204ENST00000556033 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
LINC01146-204ENST00000556033 NACADO15069 1562 aa21.26■□□□□ 0.99
LINC01146-204ENST00000556033 DCAF8L2P0C7V8 631 aa21.22■□□□□ 0.99
LINC01146-204ENST00000556033 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
LINC01146-204ENST00000556033 PABPN1Q86U42 306 aaKnown RBP eCLIP21.11■□□□□ 0.97
LINC01146-204ENST00000556033 FOXD1Q16676 465 aa21.02■□□□□ 0.96
LINC01146-204ENST00000556033 BICRAQ9NZM4 1560 aa20.82■□□□□ 0.92
LINC01146-204ENST00000556033 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
LINC01146-204ENST00000556033 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
LINC01146-204ENST00000556033 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
LINC01146-204ENST00000556033 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
LINC01146-204ENST00000556033 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
LINC01146-204ENST00000556033 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
LINC01146-204ENST00000556033 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
LINC01146-204ENST00000556033 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.85
LINC01146-204ENST00000556033 DNAJC5Q9H3Z4 198 aa20.03■□□□□ 0.8
LINC01146-204ENST00000556033 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
LINC01146-204ENST00000556033 MSH5O43196 834 aa19.81■□□□□ 0.76
LINC01146-204ENST00000556033 ERCC6Q03468 1493 aa19.71■□□□□ 0.75
LINC01146-204ENST00000556033 PIAS4Q8N2W9 510 aaPredicted RBP19.7■□□□□ 0.74
LINC01146-204ENST00000556033 CUX2O14529 1486 aa19.69■□□□□ 0.74
LINC01146-204ENST00000556033 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
LINC01146-204ENST00000556033 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
LINC01146-204ENST00000556033 ADRA2BP18089 450 aa19.5■□□□□ 0.71
LINC01146-204ENST00000556033 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
LINC01146-204ENST00000556033 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
LINC01146-204ENST00000556033 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
LINC01146-204ENST00000556033 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
LINC01146-204ENST00000556033 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
LINC01146-204ENST00000556033 NESP48681 1621 aa19.42■□□□□ 0.7
LINC01146-204ENST00000556033 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
LINC01146-204ENST00000556033 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
LINC01146-204ENST00000556033 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
LINC01146-204ENST00000556033 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.67
LINC01146-204ENST00000556033 KIF21AQ7Z4S6 1674 aa19.26■□□□□ 0.67
LINC01146-204ENST00000556033 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
LINC01146-204ENST00000556033 PDS5BQ9NTI5 1447 aa19.16■□□□□ 0.66
LINC01146-204ENST00000556033 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
LINC01146-204ENST00000556033 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
LINC01146-204ENST00000556033 MRC2Q9UBG0 1479 aa18.99■□□□□ 0.63
LINC01146-204ENST00000556033 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
LINC01146-204ENST00000556033 WDR62O43379 1518 aa18.94■□□□□ 0.62
LINC01146-204ENST00000556033 WIZO95785 1651 aa18.93■□□□□ 0.62
LINC01146-204ENST00000556033 CEP164Q9UPV0 1460 aa18.88■□□□□ 0.61
LINC01146-204ENST00000556033 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
LINC01146-204ENST00000556033 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
LINC01146-204ENST00000556033 CFTRP13569 1480 aa18.68■□□□□ 0.58
LINC01146-204ENST00000556033 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
LINC01146-204ENST00000556033 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
LINC01146-204ENST00000556033 TOP2AP11388 1531 aaKnown RBP18.61■□□□□ 0.57
LINC01146-204ENST00000556033 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
LINC01146-204ENST00000556033 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
LINC01146-204ENST00000556033 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
LINC01146-204ENST00000556033 RSF1Q96T23 1441 aaPredicted RBP18.55■□□□□ 0.56
LINC01146-204ENST00000556033 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
LINC01146-204ENST00000556033 ZNF608Q9ULD9 1512 aaPredicted RBP18.47■□□□□ 0.55
LINC01146-204ENST00000556033 ARHGEF11O15085 1522 aa18.46■□□□□ 0.55
LINC01146-204ENST00000556033 CHD1O14646 1710 aa18.42■□□□□ 0.54
LINC01146-204ENST00000556033 EIF4G3O43432 1585 aaKnown RBP18.41■□□□□ 0.54
LINC01146-204ENST00000556033 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
LINC01146-204ENST00000556033 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
LINC01146-204ENST00000556033 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
LINC01146-204ENST00000556033 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
LINC01146-204ENST00000556033 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
LINC01146-204ENST00000556033 FBLN2P98095 1184 aa18.34■□□□□ 0.53
LINC01146-204ENST00000556033 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.52
LINC01146-204ENST00000556033 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC01146-204ENST00000556033 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.51
LINC01146-204ENST00000556033 ARAP1Q96P48 1450 aa18.23■□□□□ 0.51
LINC01146-204ENST00000556033 POLA1P09884 1462 aaPredicted RBP18.18■□□□□ 0.5
LINC01146-204ENST00000556033 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.5
LINC01146-204ENST00000556033 SOGA1O94964 1423 aa18.13■□□□□ 0.49
LINC01146-204ENST00000556033 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
LINC01146-204ENST00000556033 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
LINC01146-204ENST00000556033 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
LINC01146-204ENST00000556033 SNAPC4Q5SXM2 1469 aa18.09■□□□□ 0.49
LINC01146-204ENST00000556033 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
LINC01146-204ENST00000556033 CLASP1Q7Z460 1538 aa18.05■□□□□ 0.48
LINC01146-204ENST00000556033 FGD5Q6ZNL6 1462 aa18.05■□□□□ 0.48
LINC01146-204ENST00000556033 MAGI1Q96QZ7 1491 aaPredicted RBP18.02■□□□□ 0.48
LINC01146-204ENST00000556033 PBRM1Q86U86 1689 aa18.02■□□□□ 0.47
LINC01146-204ENST00000556033 GRIN2BQ13224 1484 aa18■□□□□ 0.47
LINC01146-204ENST00000556033 SYNJ2O15056 1496 aa17.97■□□□□ 0.47
LINC01146-204ENST00000556033 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
LINC01146-204ENST00000556033 CUX1P39880 1505 aa17.95■□□□□ 0.46
LINC01146-204ENST00000556033 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
LINC01146-204ENST00000556033 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
LINC01146-204ENST00000556033 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
LINC01146-204ENST00000556033 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.44
LINC01146-204ENST00000556033 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
LINC01146-204ENST00000556033 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.44
LINC01146-204ENST00000556033 GRIN2AQ12879 1464 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms