RNA–Protein interactions for RNA: ENST00000555810.5

TUBB3-210, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-210ENST00000555810 NISCHQ9Y2I1 1504 aa36.66■■■■□ 3.46
TUBB3-210ENST00000555810 ABCC9O60706 1549 aa34.16■■■■□ 3.06
TUBB3-210ENST00000555810 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
TUBB3-210ENST00000555810 DNAJC5BQ9UF47 199 aa32.78■■■□□ 2.84
TUBB3-210ENST00000555810 RB1CC1Q8TDY2 1594 aa32.06■■■□□ 2.72
TUBB3-210ENST00000555810 PABPN1Q86U42 306 aaKnown RBP eCLIP31.73■■■□□ 2.67
TUBB3-210ENST00000555810 NACADO15069 1562 aa31.6■■■□□ 2.65
TUBB3-210ENST00000555810 DCAF8L2P0C7V8 631 aa31.55■■■□□ 2.64
TUBB3-210ENST00000555810 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
TUBB3-210ENST00000555810 BICRAQ9NZM4 1560 aa31.16■■■□□ 2.58
TUBB3-210ENST00000555810 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
TUBB3-210ENST00000555810 CECR2Q9BXF3 1484 aa30.81■■■□□ 2.52
TUBB3-210ENST00000555810 CC2D2AQ9P2K1 1620 aa30.77■■■□□ 2.52
TUBB3-210ENST00000555810 DNAJC5Q9H3Z4 198 aa30.64■■■□□ 2.5
TUBB3-210ENST00000555810 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
TUBB3-210ENST00000555810 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
TUBB3-210ENST00000555810 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
TUBB3-210ENST00000555810 DCAF1Q9Y4B6 1507 aa30.28■■■□□ 2.44
TUBB3-210ENST00000555810 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
TUBB3-210ENST00000555810 CUX2O14529 1486 aa29.65■■■□□ 2.34
TUBB3-210ENST00000555810 ERCC6Q03468 1493 aa29.54■■■□□ 2.32
TUBB3-210ENST00000555810 NCAPD3P42695 1498 aa29.17■■■□□ 2.26
TUBB3-210ENST00000555810 TRIM41Q8WV44 630 aa29.11■■■□□ 2.25
TUBB3-210ENST00000555810 NESP48681 1621 aa29.11■■■□□ 2.25
TUBB3-210ENST00000555810 ATAD2BQ9ULI0 1458 aa29.02■■■□□ 2.24
TUBB3-210ENST00000555810 THOC2Q8NI27 1593 aaKnown RBP28.89■■■□□ 2.22
TUBB3-210ENST00000555810 HMGXB3Q12766 1538 aa28.87■■■□□ 2.21
TUBB3-210ENST00000555810 SMARCA2P51531 1590 aa28.87■■■□□ 2.21
TUBB3-210ENST00000555810 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
TUBB3-210ENST00000555810 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
TUBB3-210ENST00000555810 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.19
TUBB3-210ENST00000555810 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
TUBB3-210ENST00000555810 PDS5BQ9NTI5 1447 aa28.55■■■□□ 2.16
TUBB3-210ENST00000555810 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
TUBB3-210ENST00000555810 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
TUBB3-210ENST00000555810 MRC2Q9UBG0 1479 aa28.36■■■□□ 2.13
TUBB3-210ENST00000555810 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
TUBB3-210ENST00000555810 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
TUBB3-210ENST00000555810 WDR62O43379 1518 aa28.28■■■□□ 2.12
TUBB3-210ENST00000555810 OSCARQ8IYS5 282 aa28.26■■■□□ 2.11
TUBB3-210ENST00000555810 CEP164Q9UPV0 1460 aa28.1■■■□□ 2.09
TUBB3-210ENST00000555810 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
TUBB3-210ENST00000555810 RIMBP3CA6NJZ7 1639 aa27.98■■■□□ 2.07
TUBB3-210ENST00000555810 RIMBP3BA6NNM3 1639 aa27.98■■■□□ 2.07
TUBB3-210ENST00000555810 RIMBP3Q9UFD9 1639 aa27.98■■■□□ 2.07
TUBB3-210ENST00000555810 WIZO95785 1651 aa27.96■■■□□ 2.07
TUBB3-210ENST00000555810 URB2Q14146 1524 aaKnown RBP27.82■■■□□ 2.04
TUBB3-210ENST00000555810 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
TUBB3-210ENST00000555810 CFTRP13569 1480 aa27.77■■■□□ 2.04
TUBB3-210ENST00000555810 CYB5RLQ6IPT4 315 aa27.73■■■□□ 2.03
TUBB3-210ENST00000555810 TRHP20396 242 aaPredicted RBP27.72■■■□□ 2.03
TUBB3-210ENST00000555810 ZNF608Q9ULD9 1512 aaPredicted RBP27.65■■■□□ 2.02
TUBB3-210ENST00000555810 IFT140Q96RY7 1462 aa27.54■■■□□ 2
TUBB3-210ENST00000555810 AEBP2Q6ZN18 517 aaPredicted RBP27.51■■□□□ 1.99
TUBB3-210ENST00000555810 PRDM2Q13029 1718 aa27.48■■□□□ 1.99
TUBB3-210ENST00000555810 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
TUBB3-210ENST00000555810 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
TUBB3-210ENST00000555810 CHD1O14646 1710 aa27.44■■□□□ 1.98
TUBB3-210ENST00000555810 EIF4G3O43432 1585 aaKnown RBP27.43■■□□□ 1.98
TUBB3-210ENST00000555810 FBLN2P98095 1184 aa27.4■■□□□ 1.98
TUBB3-210ENST00000555810 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
TUBB3-210ENST00000555810 TOPBP1Q92547 1522 aa27.37■■□□□ 1.97
TUBB3-210ENST00000555810 AQRO60306 1485 aaKnown RBP eCLIP27.32■■□□□ 1.96
TUBB3-210ENST00000555810 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
TUBB3-210ENST00000555810 ABCC8Q09428 1581 aa27.2■■□□□ 1.94
TUBB3-210ENST00000555810 DNMBPQ6XZF7 1577 aa27.18■■□□□ 1.94
TUBB3-210ENST00000555810 TARBP1Q13395 1621 aaKnown RBP27.18■■□□□ 1.94
TUBB3-210ENST00000555810 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
TUBB3-210ENST00000555810 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
TUBB3-210ENST00000555810 TDRD9Q8NDG6 1382 aaKnown RBP27.02■■□□□ 1.92
TUBB3-210ENST00000555810 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
TUBB3-210ENST00000555810 CHMP7Q8WUX9 453 aaPredicted RBP26.98■■□□□ 1.91
TUBB3-210ENST00000555810 SNAPC4Q5SXM2 1469 aa26.98■■□□□ 1.91
TUBB3-210ENST00000555810 SYNJ1O43426 1573 aa26.94■■□□□ 1.9
TUBB3-210ENST00000555810 SOGA1O94964 1423 aa26.93■■□□□ 1.9
TUBB3-210ENST00000555810 GAPVD1Q14C86 1478 aa26.82■■□□□ 1.88
TUBB3-210ENST00000555810 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
TUBB3-210ENST00000555810 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
TUBB3-210ENST00000555810 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
TUBB3-210ENST00000555810 SYNJ2O15056 1496 aa26.75■■□□□ 1.87
TUBB3-210ENST00000555810 GRIN2BQ13224 1484 aa26.75■■□□□ 1.87
TUBB3-210ENST00000555810 PBRM1Q86U86 1689 aa26.65■■□□□ 1.86
TUBB3-210ENST00000555810 CUX1P39880 1505 aa26.61■■□□□ 1.85
TUBB3-210ENST00000555810 ERCC6L2Q5T890 1561 aa26.61■■□□□ 1.85
TUBB3-210ENST00000555810 KIF13AQ9H1H9 1805 aa26.5■■□□□ 1.83
TUBB3-210ENST00000555810 CEP170Q5SW79 1584 aa26.45■■□□□ 1.82
TUBB3-210ENST00000555810 ABCA5Q8WWZ7 1642 aa26.42■■□□□ 1.82
TUBB3-210ENST00000555810 GRIN2AQ12879 1464 aa26.41■■□□□ 1.82
TUBB3-210ENST00000555810 ILDR1Q86SU0 546 aaPredicted RBP26.37■■□□□ 1.81
TUBB3-210ENST00000555810 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
TUBB3-210ENST00000555810 NUP160Q12769 1436 aa26.31■■□□□ 1.8
TUBB3-210ENST00000555810 FAM69CQ0P6D2 419 aa26.31■■□□□ 1.8
TUBB3-210ENST00000555810 SHROOM2Q13796 1616 aa26.3■■□□□ 1.8
TUBB3-210ENST00000555810 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
TUBB3-210ENST00000555810 KDM4FA0A1W2PPD8 638 aa26.27■■□□□ 1.8
TUBB3-210ENST00000555810 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
TUBB3-210ENST00000555810 NPM1P06748 294 aaKnown RBP eCLIP26.19■■□□□ 1.78
TUBB3-210ENST00000555810 ABCC10Q5T3U5 1492 aa26.18■■□□□ 1.78
TUBB3-210ENST00000555810 FHAD1B1AJZ9 1412 aa26.17■■□□□ 1.78
TUBB3-210ENST00000555810 KDM6BO15054 1643 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms