RNA–Protein interactions for RNA: ENST00000555655.1

AL392023.1-201, humanhuman

TSL 3 BASIC

Gene AL392023.1, Length 531 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL392023.1-201ENST00000555655 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
AL392023.1-201ENST00000555655 ABCC9O60706 1549 aa24.67■■□□□ 1.54
AL392023.1-201ENST00000555655 DNAJC5BQ9UF47 199 aa24.07■■□□□ 1.44
AL392023.1-201ENST00000555655 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
AL392023.1-201ENST00000555655 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
AL392023.1-201ENST00000555655 PABPN1Q86U42 306 aaKnown RBP eCLIP22.87■■□□□ 1.25
AL392023.1-201ENST00000555655 NACADO15069 1562 aa22.75■■□□□ 1.23
AL392023.1-201ENST00000555655 DNAJC5Q9H3Z4 198 aa22.68■■□□□ 1.22
AL392023.1-201ENST00000555655 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
AL392023.1-201ENST00000555655 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
AL392023.1-201ENST00000555655 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
AL392023.1-201ENST00000555655 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.16
AL392023.1-201ENST00000555655 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
AL392023.1-201ENST00000555655 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
AL392023.1-201ENST00000555655 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
AL392023.1-201ENST00000555655 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
AL392023.1-201ENST00000555655 CUX2O14529 1486 aa21.64■■□□□ 1.05
AL392023.1-201ENST00000555655 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
AL392023.1-201ENST00000555655 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
AL392023.1-201ENST00000555655 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.03
AL392023.1-201ENST00000555655 ERCC6Q03468 1493 aa21.3■■□□□ 1
AL392023.1-201ENST00000555655 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
AL392023.1-201ENST00000555655 NCAPD3P42695 1498 aa21.08■□□□□ 0.97
AL392023.1-201ENST00000555655 NESP48681 1621 aa21■□□□□ 0.95
AL392023.1-201ENST00000555655 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
AL392023.1-201ENST00000555655 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
AL392023.1-201ENST00000555655 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
AL392023.1-201ENST00000555655 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
AL392023.1-201ENST00000555655 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
AL392023.1-201ENST00000555655 KIF21AQ7Z4S6 1674 aa20.62■□□□□ 0.89
AL392023.1-201ENST00000555655 SMARCA4P51532 1647 aa20.58■□□□□ 0.89
AL392023.1-201ENST00000555655 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
AL392023.1-201ENST00000555655 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
AL392023.1-201ENST00000555655 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
AL392023.1-201ENST00000555655 OSCARQ8IYS5 282 aa20.5■□□□□ 0.87
AL392023.1-201ENST00000555655 WDR62O43379 1518 aa20.46■□□□□ 0.87
AL392023.1-201ENST00000555655 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
AL392023.1-201ENST00000555655 PEG3Q9GZU2 1588 aa20.44■□□□□ 0.86
AL392023.1-201ENST00000555655 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
AL392023.1-201ENST00000555655 RIMBP3CA6NJZ7 1639 aa20.32■□□□□ 0.84
AL392023.1-201ENST00000555655 RIMBP3BA6NNM3 1639 aa20.32■□□□□ 0.84
AL392023.1-201ENST00000555655 RIMBP3Q9UFD9 1639 aa20.32■□□□□ 0.84
AL392023.1-201ENST00000555655 MROH2BQ7Z745 1585 aa20.18■□□□□ 0.82
AL392023.1-201ENST00000555655 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
AL392023.1-201ENST00000555655 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
AL392023.1-201ENST00000555655 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
AL392023.1-201ENST00000555655 CYB5RLQ6IPT4 315 aa20.07■□□□□ 0.8
AL392023.1-201ENST00000555655 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
AL392023.1-201ENST00000555655 TRHP20396 242 aaPredicted RBP20.05■□□□□ 0.8
AL392023.1-201ENST00000555655 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
AL392023.1-201ENST00000555655 CFTRP13569 1480 aa19.97■□□□□ 0.79
AL392023.1-201ENST00000555655 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
AL392023.1-201ENST00000555655 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
AL392023.1-201ENST00000555655 WIZO95785 1651 aa19.86■□□□□ 0.77
AL392023.1-201ENST00000555655 IFT140Q96RY7 1462 aa19.83■□□□□ 0.76
AL392023.1-201ENST00000555655 RSF1Q96T23 1441 aaPredicted RBP19.77■□□□□ 0.76
AL392023.1-201ENST00000555655 CHD1O14646 1710 aa19.71■□□□□ 0.75
AL392023.1-201ENST00000555655 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
AL392023.1-201ENST00000555655 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
AL392023.1-201ENST00000555655 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.73
AL392023.1-201ENST00000555655 FBLN2P98095 1184 aa19.57■□□□□ 0.72
AL392023.1-201ENST00000555655 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
AL392023.1-201ENST00000555655 TARBP1Q13395 1621 aaKnown RBP19.55■□□□□ 0.72
AL392023.1-201ENST00000555655 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
AL392023.1-201ENST00000555655 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
AL392023.1-201ENST00000555655 ABCC8Q09428 1581 aa19.5■□□□□ 0.71
AL392023.1-201ENST00000555655 ILDR1Q86SU0 546 aaPredicted RBP19.47■□□□□ 0.71
AL392023.1-201ENST00000555655 DNMBPQ6XZF7 1577 aa19.45■□□□□ 0.7
AL392023.1-201ENST00000555655 POLA1P09884 1462 aaPredicted RBP19.39■□□□□ 0.69
AL392023.1-201ENST00000555655 CCDC88BA6NC98 1476 aa19.37■□□□□ 0.69
AL392023.1-201ENST00000555655 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
AL392023.1-201ENST00000555655 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
AL392023.1-201ENST00000555655 SYNJ1O43426 1573 aa19.36■□□□□ 0.69
AL392023.1-201ENST00000555655 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
AL392023.1-201ENST00000555655 RAD54L2Q9Y4B4 1467 aa19.34■□□□□ 0.69
AL392023.1-201ENST00000555655 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
AL392023.1-201ENST00000555655 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
AL392023.1-201ENST00000555655 SOGA1O94964 1423 aa19.27■□□□□ 0.68
AL392023.1-201ENST00000555655 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
AL392023.1-201ENST00000555655 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
AL392023.1-201ENST00000555655 KDM4FA0A1W2PPD8 638 aa19.21■□□□□ 0.67
AL392023.1-201ENST00000555655 GRIN2BQ13224 1484 aa19.19■□□□□ 0.66
AL392023.1-201ENST00000555655 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
AL392023.1-201ENST00000555655 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
AL392023.1-201ENST00000555655 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
AL392023.1-201ENST00000555655 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
AL392023.1-201ENST00000555655 CEP170Q5SW79 1584 aa19.02■□□□□ 0.64
AL392023.1-201ENST00000555655 CUX1P39880 1505 aa19■□□□□ 0.63
AL392023.1-201ENST00000555655 PBRM1Q86U86 1689 aa19■□□□□ 0.63
AL392023.1-201ENST00000555655 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
AL392023.1-201ENST00000555655 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
AL392023.1-201ENST00000555655 NUP160Q12769 1436 aa18.96■□□□□ 0.63
AL392023.1-201ENST00000555655 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
AL392023.1-201ENST00000555655 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
AL392023.1-201ENST00000555655 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
AL392023.1-201ENST00000555655 KDM6BO15054 1643 aa18.89■□□□□ 0.62
AL392023.1-201ENST00000555655 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
AL392023.1-201ENST00000555655 MAPKBP1O60336 1514 aa18.87■□□□□ 0.61
AL392023.1-201ENST00000555655 DIP2BQ9P265 1576 aa18.87■□□□□ 0.61
AL392023.1-201ENST00000555655 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms