RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 NISCHQ9Y2I1 1504 aa25.59■■□□□ 1.69
XRCC3-213ENST00000555451 CCDC180Q9P1Z9 1646 aa22.56■■□□□ 1.2
XRCC3-213ENST00000555451 ABCC9O60706 1549 aa22.05■■□□□ 1.12
XRCC3-213ENST00000555451 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
XRCC3-213ENST00000555451 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
XRCC3-213ENST00000555451 NACADO15069 1562 aa21.23■□□□□ 0.99
XRCC3-213ENST00000555451 RB1CC1Q8TDY2 1594 aa21.23■□□□□ 0.99
XRCC3-213ENST00000555451 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
XRCC3-213ENST00000555451 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.98
XRCC3-213ENST00000555451 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
XRCC3-213ENST00000555451 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
XRCC3-213ENST00000555451 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
XRCC3-213ENST00000555451 PABPN1Q86U42 306 aaKnown RBP eCLIP20.62■□□□□ 0.89
XRCC3-213ENST00000555451 BICRAQ9NZM4 1560 aa20.6■□□□□ 0.89
XRCC3-213ENST00000555451 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
XRCC3-213ENST00000555451 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
XRCC3-213ENST00000555451 CC2D2AQ9P2K1 1620 aa19.96■□□□□ 0.79
XRCC3-213ENST00000555451 CECR2Q9BXF3 1484 aa19.83■□□□□ 0.76
XRCC3-213ENST00000555451 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
XRCC3-213ENST00000555451 SUPT5HO00267 1087 aaKnown RBP19.79■□□□□ 0.76
XRCC3-213ENST00000555451 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
XRCC3-213ENST00000555451 MROH2BQ7Z745 1585 aa19.73■□□□□ 0.75
XRCC3-213ENST00000555451 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
XRCC3-213ENST00000555451 NCAPD3P42695 1498 aa19.61■□□□□ 0.73
XRCC3-213ENST00000555451 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
XRCC3-213ENST00000555451 WIZO95785 1651 aa19.57■□□□□ 0.72
XRCC3-213ENST00000555451 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
XRCC3-213ENST00000555451 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
XRCC3-213ENST00000555451 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
XRCC3-213ENST00000555451 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
XRCC3-213ENST00000555451 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
XRCC3-213ENST00000555451 DNAJC5Q9H3Z4 198 aa19.4■□□□□ 0.7
XRCC3-213ENST00000555451 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
XRCC3-213ENST00000555451 NESP48681 1621 aa19.09■□□□□ 0.65
XRCC3-213ENST00000555451 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
XRCC3-213ENST00000555451 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
XRCC3-213ENST00000555451 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
XRCC3-213ENST00000555451 CUX2O14529 1486 aa18.95■□□□□ 0.62
XRCC3-213ENST00000555451 PDS5BQ9NTI5 1447 aa18.94■□□□□ 0.62
XRCC3-213ENST00000555451 CFTRP13569 1480 aa18.92■□□□□ 0.62
XRCC3-213ENST00000555451 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
XRCC3-213ENST00000555451 KIF21AQ7Z4S6 1674 aa18.83■□□□□ 0.61
XRCC3-213ENST00000555451 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
XRCC3-213ENST00000555451 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
XRCC3-213ENST00000555451 FANCD2Q9BXW9 1451 aa18.78■□□□□ 0.6
XRCC3-213ENST00000555451 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
XRCC3-213ENST00000555451 MRC2Q9UBG0 1479 aa18.73■□□□□ 0.59
XRCC3-213ENST00000555451 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
XRCC3-213ENST00000555451 WDR62O43379 1518 aa18.68■□□□□ 0.58
XRCC3-213ENST00000555451 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
XRCC3-213ENST00000555451 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
XRCC3-213ENST00000555451 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
XRCC3-213ENST00000555451 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
XRCC3-213ENST00000555451 BIVM-ERCC5R4GMW8 1640 aa18.53■□□□□ 0.56
XRCC3-213ENST00000555451 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
XRCC3-213ENST00000555451 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
XRCC3-213ENST00000555451 CUX1P39880 1505 aa18.47■□□□□ 0.55
XRCC3-213ENST00000555451 DNMBPQ6XZF7 1577 aa18.46■□□□□ 0.55
XRCC3-213ENST00000555451 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
XRCC3-213ENST00000555451 EEA1Q15075 1411 aa18.36■□□□□ 0.53
XRCC3-213ENST00000555451 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.53
XRCC3-213ENST00000555451 FGD5Q6ZNL6 1462 aa18.3■□□□□ 0.52
XRCC3-213ENST00000555451 TARBP1Q13395 1621 aaKnown RBP18.29■□□□□ 0.52
XRCC3-213ENST00000555451 SOGA1O94964 1423 aa18.29■□□□□ 0.52
XRCC3-213ENST00000555451 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
XRCC3-213ENST00000555451 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-213ENST00000555451 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
XRCC3-213ENST00000555451 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
XRCC3-213ENST00000555451 EIF4G3O43432 1585 aaKnown RBP18.19■□□□□ 0.5
XRCC3-213ENST00000555451 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
XRCC3-213ENST00000555451 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.5
XRCC3-213ENST00000555451 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
XRCC3-213ENST00000555451 ABCA10Q8WWZ4 1543 aa18.17■□□□□ 0.5
XRCC3-213ENST00000555451 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
XRCC3-213ENST00000555451 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
XRCC3-213ENST00000555451 KIF21BO75037 1637 aa18.11■□□□□ 0.49
XRCC3-213ENST00000555451 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
XRCC3-213ENST00000555451 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
XRCC3-213ENST00000555451 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
XRCC3-213ENST00000555451 GRIN2BQ13224 1484 aa18.05■□□□□ 0.48
XRCC3-213ENST00000555451 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
XRCC3-213ENST00000555451 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
XRCC3-213ENST00000555451 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
XRCC3-213ENST00000555451 PRXQ9BXM0 1461 aa18.02■□□□□ 0.48
XRCC3-213ENST00000555451 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
XRCC3-213ENST00000555451 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
XRCC3-213ENST00000555451 IGF1RP08069 1367 aa17.99■□□□□ 0.47
XRCC3-213ENST00000555451 CUL7Q14999 1698 aa17.97■□□□□ 0.47
XRCC3-213ENST00000555451 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
XRCC3-213ENST00000555451 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
XRCC3-213ENST00000555451 TNIKQ9UKE5 1360 aa17.95■□□□□ 0.46
XRCC3-213ENST00000555451 FBLN2P98095 1184 aa17.94■□□□□ 0.46
XRCC3-213ENST00000555451 CHD1O14646 1710 aa17.94■□□□□ 0.46
XRCC3-213ENST00000555451 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
XRCC3-213ENST00000555451 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
XRCC3-213ENST00000555451 CHMP7Q8WUX9 453 aaPredicted RBP17.92■□□□□ 0.46
XRCC3-213ENST00000555451 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
XRCC3-213ENST00000555451 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.45
XRCC3-213ENST00000555451 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
XRCC3-213ENST00000555451 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms