RNA–Protein interactions for RNA: ENST00000555403.1

AL359397.2-201, humanhuman

TSL 3 BASIC

Gene AL359397.2, Length 446 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359397.2-201ENST00000555403 NISCHQ9Y2I1 1504 aa25.7■■□□□ 1.7
AL359397.2-201ENST00000555403 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
AL359397.2-201ENST00000555403 ABCC9O60706 1549 aa22.37■■□□□ 1.17
AL359397.2-201ENST00000555403 AEBP2Q6ZN18 517 aaPredicted RBP21.67■■□□□ 1.06
AL359397.2-201ENST00000555403 RB1CC1Q8TDY2 1594 aa21.52■■□□□ 1.04
AL359397.2-201ENST00000555403 NACADO15069 1562 aa21.48■■□□□ 1.03
AL359397.2-201ENST00000555403 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.02
AL359397.2-201ENST00000555403 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
AL359397.2-201ENST00000555403 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
AL359397.2-201ENST00000555403 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
AL359397.2-201ENST00000555403 UNC13AQ9UPW8 1703 aa21.19■□□□□ 0.98
AL359397.2-201ENST00000555403 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
AL359397.2-201ENST00000555403 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
AL359397.2-201ENST00000555403 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
AL359397.2-201ENST00000555403 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
AL359397.2-201ENST00000555403 DNAJC5BQ9UF47 199 aa20.46■□□□□ 0.87
AL359397.2-201ENST00000555403 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
AL359397.2-201ENST00000555403 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
AL359397.2-201ENST00000555403 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.83
AL359397.2-201ENST00000555403 CECR2Q9BXF3 1484 aa20.07■□□□□ 0.8
AL359397.2-201ENST00000555403 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
AL359397.2-201ENST00000555403 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
AL359397.2-201ENST00000555403 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
AL359397.2-201ENST00000555403 ATAD2BQ9ULI0 1458 aa19.82■□□□□ 0.76
AL359397.2-201ENST00000555403 SMARCA2P51531 1590 aa19.81■□□□□ 0.76
AL359397.2-201ENST00000555403 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
AL359397.2-201ENST00000555403 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
AL359397.2-201ENST00000555403 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
AL359397.2-201ENST00000555403 WIZO95785 1651 aa19.68■□□□□ 0.74
AL359397.2-201ENST00000555403 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
AL359397.2-201ENST00000555403 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
AL359397.2-201ENST00000555403 TOP2AP11388 1531 aaKnown RBP19.43■□□□□ 0.7
AL359397.2-201ENST00000555403 NESP48681 1621 aa19.38■□□□□ 0.69
AL359397.2-201ENST00000555403 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
AL359397.2-201ENST00000555403 ERCC6Q03468 1493 aa19.26■□□□□ 0.67
AL359397.2-201ENST00000555403 KIF21AQ7Z4S6 1674 aa19.25■□□□□ 0.67
AL359397.2-201ENST00000555403 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
AL359397.2-201ENST00000555403 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
AL359397.2-201ENST00000555403 CCDC88BA6NC98 1476 aa19.15■□□□□ 0.66
AL359397.2-201ENST00000555403 PRDM2Q13029 1718 aa19.14■□□□□ 0.66
AL359397.2-201ENST00000555403 CFTRP13569 1480 aa19.1■□□□□ 0.65
AL359397.2-201ENST00000555403 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
AL359397.2-201ENST00000555403 CUX2O14529 1486 aa19.04■□□□□ 0.64
AL359397.2-201ENST00000555403 FANCD2Q9BXW9 1451 aa19.02■□□□□ 0.63
AL359397.2-201ENST00000555403 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
AL359397.2-201ENST00000555403 CEP164Q9UPV0 1460 aa19.01■□□□□ 0.63
AL359397.2-201ENST00000555403 MRC2Q9UBG0 1479 aa18.97■□□□□ 0.63
AL359397.2-201ENST00000555403 WDR62O43379 1518 aa18.95■□□□□ 0.62
AL359397.2-201ENST00000555403 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
AL359397.2-201ENST00000555403 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
AL359397.2-201ENST00000555403 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
AL359397.2-201ENST00000555403 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
AL359397.2-201ENST00000555403 CUX1P39880 1505 aa18.62■□□□□ 0.57
AL359397.2-201ENST00000555403 SENP3Q9H4L4 574 aaPredicted RBP18.59■□□□□ 0.57
AL359397.2-201ENST00000555403 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.56
AL359397.2-201ENST00000555403 IFT140Q96RY7 1462 aa18.58■□□□□ 0.56
AL359397.2-201ENST00000555403 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
AL359397.2-201ENST00000555403 FGD5Q6ZNL6 1462 aa18.54■□□□□ 0.56
AL359397.2-201ENST00000555403 EIF4G3O43432 1585 aaKnown RBP18.54■□□□□ 0.56
AL359397.2-201ENST00000555403 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
AL359397.2-201ENST00000555403 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
AL359397.2-201ENST00000555403 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
AL359397.2-201ENST00000555403 SYNJ1O43426 1573 aa18.5■□□□□ 0.55
AL359397.2-201ENST00000555403 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
AL359397.2-201ENST00000555403 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
AL359397.2-201ENST00000555403 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
AL359397.2-201ENST00000555403 SOGA1O94964 1423 aa18.43■□□□□ 0.54
AL359397.2-201ENST00000555403 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.54
AL359397.2-201ENST00000555403 PBRM1Q86U86 1689 aa18.37■□□□□ 0.53
AL359397.2-201ENST00000555403 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
AL359397.2-201ENST00000555403 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
AL359397.2-201ENST00000555403 CHD1O14646 1710 aa18.34■□□□□ 0.53
AL359397.2-201ENST00000555403 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.53
AL359397.2-201ENST00000555403 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.53
AL359397.2-201ENST00000555403 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
AL359397.2-201ENST00000555403 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
AL359397.2-201ENST00000555403 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
AL359397.2-201ENST00000555403 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
AL359397.2-201ENST00000555403 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
AL359397.2-201ENST00000555403 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
AL359397.2-201ENST00000555403 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
AL359397.2-201ENST00000555403 SYNJ2O15056 1496 aa18.14■□□□□ 0.49
AL359397.2-201ENST00000555403 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
AL359397.2-201ENST00000555403 FBLN2P98095 1184 aa18.1■□□□□ 0.49
AL359397.2-201ENST00000555403 CLASP1Q7Z460 1538 aa18.07■□□□□ 0.48
AL359397.2-201ENST00000555403 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
AL359397.2-201ENST00000555403 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
AL359397.2-201ENST00000555403 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
AL359397.2-201ENST00000555403 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
AL359397.2-201ENST00000555403 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
AL359397.2-201ENST00000555403 KIF27Q86VH2 1401 aa18.03■□□□□ 0.48
AL359397.2-201ENST00000555403 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
AL359397.2-201ENST00000555403 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
AL359397.2-201ENST00000555403 CUL7Q14999 1698 aa18.01■□□□□ 0.47
AL359397.2-201ENST00000555403 ARHGEF11O15085 1522 aa18■□□□□ 0.47
AL359397.2-201ENST00000555403 NUP160Q12769 1436 aa17.94■□□□□ 0.46
AL359397.2-201ENST00000555403 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
AL359397.2-201ENST00000555403 IGF1RP08069 1367 aa17.92■□□□□ 0.46
AL359397.2-201ENST00000555403 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
AL359397.2-201ENST00000555403 SHROOM2Q13796 1616 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms