RNA–Protein interactions for RNA: ENST00000555263.1

ATG2B-207, Transcript of autophagy related 2B, humanhuman

TSL 2

Gene ATG2B, Length 492 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-207ENST00000555263 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
ATG2B-207ENST00000555263 CCDC180Q9P1Z9 1646 aa14.16□□□□□ -0.14
ATG2B-207ENST00000555263 ABCC9O60706 1549 aa14.12□□□□□ -0.15
ATG2B-207ENST00000555263 RB1CC1Q8TDY2 1594 aa13.44□□□□□ -0.26
ATG2B-207ENST00000555263 NACADO15069 1562 aa13.38□□□□□ -0.27
ATG2B-207ENST00000555263 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
ATG2B-207ENST00000555263 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
ATG2B-207ENST00000555263 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
ATG2B-207ENST00000555263 ZCCHC6Q5VYS8 1495 aaKnown RBP13.19□□□□□ -0.3
ATG2B-207ENST00000555263 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
ATG2B-207ENST00000555263 UNC13AQ9UPW8 1703 aa13.16□□□□□ -0.3
ATG2B-207ENST00000555263 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
ATG2B-207ENST00000555263 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
ATG2B-207ENST00000555263 SCRIBQ14160 1630 aa12.93□□□□□ -0.34
ATG2B-207ENST00000555263 SHROOM4Q9ULL8 1493 aa12.89□□□□□ -0.35
ATG2B-207ENST00000555263 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
ATG2B-207ENST00000555263 CC2D2AQ9P2K1 1620 aa12.75□□□□□ -0.37
ATG2B-207ENST00000555263 CECR2Q9BXF3 1484 aa12.71□□□□□ -0.38
ATG2B-207ENST00000555263 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.41
ATG2B-207ENST00000555263 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
ATG2B-207ENST00000555263 ATAD2BQ9ULI0 1458 aa12.37□□□□□ -0.43
ATG2B-207ENST00000555263 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
ATG2B-207ENST00000555263 SMARCA2P51531 1590 aa12.29□□□□□ -0.44
ATG2B-207ENST00000555263 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
ATG2B-207ENST00000555263 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
ATG2B-207ENST00000555263 MROH2BQ7Z745 1585 aa12.26□□□□□ -0.45
ATG2B-207ENST00000555263 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
ATG2B-207ENST00000555263 CUX2O14529 1486 aa12.21□□□□□ -0.45
ATG2B-207ENST00000555263 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.45
ATG2B-207ENST00000555263 NESP48681 1621 aa12.19□□□□□ -0.46
ATG2B-207ENST00000555263 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
ATG2B-207ENST00000555263 WIZO95785 1651 aa12.09□□□□□ -0.47
ATG2B-207ENST00000555263 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
ATG2B-207ENST00000555263 RSF1Q96T23 1441 aaPredicted RBP12.05□□□□□ -0.48
ATG2B-207ENST00000555263 AEBP2Q6ZN18 517 aaPredicted RBP12.02□□□□□ -0.49
ATG2B-207ENST00000555263 CADPSQ9ULU8 1353 aa12.02□□□□□ -0.49
ATG2B-207ENST00000555263 THOC2Q8NI27 1593 aaKnown RBP12.01□□□□□ -0.49
ATG2B-207ENST00000555263 KIF21AQ7Z4S6 1674 aa11.98□□□□□ -0.49
ATG2B-207ENST00000555263 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
ATG2B-207ENST00000555263 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
ATG2B-207ENST00000555263 CFTRP13569 1480 aa11.9□□□□□ -0.5
ATG2B-207ENST00000555263 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
ATG2B-207ENST00000555263 WDR62O43379 1518 aa11.87□□□□□ -0.51
ATG2B-207ENST00000555263 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
ATG2B-207ENST00000555263 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
ATG2B-207ENST00000555263 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
ATG2B-207ENST00000555263 URB2Q14146 1524 aaKnown RBP11.8□□□□□ -0.52
ATG2B-207ENST00000555263 CHIC1Q5VXU3 224 aa11.74□□□□□ -0.53
ATG2B-207ENST00000555263 TRIM41Q8WV44 630 aa11.71□□□□□ -0.53
ATG2B-207ENST00000555263 PRDM2Q13029 1718 aa11.7□□□□□ -0.54
ATG2B-207ENST00000555263 TOPBP1Q92547 1522 aa11.65□□□□□ -0.54
ATG2B-207ENST00000555263 ZNF608Q9ULD9 1512 aaPredicted RBP11.64□□□□□ -0.55
ATG2B-207ENST00000555263 IFT140Q96RY7 1462 aa11.62□□□□□ -0.55
ATG2B-207ENST00000555263 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
ATG2B-207ENST00000555263 OSCARQ8IYS5 282 aa11.6□□□□□ -0.55
ATG2B-207ENST00000555263 ABCC8Q09428 1581 aa11.59□□□□□ -0.55
ATG2B-207ENST00000555263 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
ATG2B-207ENST00000555263 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
ATG2B-207ENST00000555263 AQRO60306 1485 aaKnown RBP eCLIP11.53□□□□□ -0.56
ATG2B-207ENST00000555263 SUPT5HO00267 1087 aaKnown RBP11.53□□□□□ -0.56
ATG2B-207ENST00000555263 EIF4G3O43432 1585 aaKnown RBP11.53□□□□□ -0.56
ATG2B-207ENST00000555263 RAD54L2Q9Y4B4 1467 aa11.52□□□□□ -0.56
ATG2B-207ENST00000555263 CUX1P39880 1505 aa11.51□□□□□ -0.57
ATG2B-207ENST00000555263 SOGA1O94964 1423 aa11.49□□□□□ -0.57
ATG2B-207ENST00000555263 TDRD9Q8NDG6 1382 aaKnown RBP11.48□□□□□ -0.57
ATG2B-207ENST00000555263 FGD5Q6ZNL6 1462 aa11.48□□□□□ -0.57
ATG2B-207ENST00000555263 RIMBP3CA6NJZ7 1639 aa11.42□□□□□ -0.58
ATG2B-207ENST00000555263 RIMBP3BA6NNM3 1639 aa11.42□□□□□ -0.58
ATG2B-207ENST00000555263 RIMBP3Q9UFD9 1639 aa11.42□□□□□ -0.58
ATG2B-207ENST00000555263 CHD1O14646 1710 aa11.4□□□□□ -0.58
ATG2B-207ENST00000555263 ARHGEF11O15085 1522 aa11.4□□□□□ -0.58
ATG2B-207ENST00000555263 SNAPC4Q5SXM2 1469 aa11.39□□□□□ -0.59
ATG2B-207ENST00000555263 WDR97A6NE52 1622 aa11.38□□□□□ -0.59
ATG2B-207ENST00000555263 FBLN2P98095 1184 aa11.38□□□□□ -0.59
ATG2B-207ENST00000555263 GRIN2BQ13224 1484 aa11.37□□□□□ -0.59
ATG2B-207ENST00000555263 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
ATG2B-207ENST00000555263 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
ATG2B-207ENST00000555263 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
ATG2B-207ENST00000555263 ABCA5Q8WWZ7 1642 aa11.33□□□□□ -0.6
ATG2B-207ENST00000555263 CLASP1Q7Z460 1538 aa11.33□□□□□ -0.6
ATG2B-207ENST00000555263 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
ATG2B-207ENST00000555263 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
ATG2B-207ENST00000555263 TOP2BQ02880 1626 aa11.32□□□□□ -0.6
ATG2B-207ENST00000555263 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
ATG2B-207ENST00000555263 WRNQ14191 1432 aaPredicted RBP eCLIP11.32□□□□□ -0.6
ATG2B-207ENST00000555263 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
ATG2B-207ENST00000555263 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
ATG2B-207ENST00000555263 CYB5RLQ6IPT4 315 aa11.31□□□□□ -0.6
ATG2B-207ENST00000555263 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
ATG2B-207ENST00000555263 GRIN2AQ12879 1464 aa11.23□□□□□ -0.61
ATG2B-207ENST00000555263 ADAMTS12P58397 1594 aa11.23□□□□□ -0.61
ATG2B-207ENST00000555263 NUP160Q12769 1436 aa11.21□□□□□ -0.61
ATG2B-207ENST00000555263 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.61
ATG2B-207ENST00000555263 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
ATG2B-207ENST00000555263 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
ATG2B-207ENST00000555263 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
ATG2B-207ENST00000555263 ERCC6L2Q5T890 1561 aa11.19□□□□□ -0.62
ATG2B-207ENST00000555263 SHROOM2Q13796 1616 aa11.14□□□□□ -0.63
ATG2B-207ENST00000555263 IGF1RP08069 1367 aa11.14□□□□□ -0.63
ATG2B-207ENST00000555263 KIF27Q86VH2 1401 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms