RNA–Protein interactions for RNA: ENST00000555110.1

PRKCH-212, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-212ENST00000555110 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
PRKCH-212ENST00000555110 ABCC9O60706 1549 aa8.98□□□□□ -0.97
PRKCH-212ENST00000555110 CCDC180Q9P1Z9 1646 aa8.81□□□□□ -1
PRKCH-212ENST00000555110 DNAJC5BQ9UF47 199 aa8.59□□□□□ -1.03
PRKCH-212ENST00000555110 RB1CC1Q8TDY2 1594 aa8.5□□□□□ -1.05
PRKCH-212ENST00000555110 NACADO15069 1562 aa8.41□□□□□ -1.06
PRKCH-212ENST00000555110 CHIC1Q5VXU3 224 aa8.35□□□□□ -1.07
PRKCH-212ENST00000555110 PABPN1Q86U42 306 aaKnown RBP eCLIP8.31□□□□□ -1.08
PRKCH-212ENST00000555110 MYO15BQ96JP2 1530 aa8.29□□□□□ -1.08
PRKCH-212ENST00000555110 SHROOM4Q9ULL8 1493 aa8.24□□□□□ -1.09
PRKCH-212ENST00000555110 BICRAQ9NZM4 1560 aa8.22□□□□□ -1.09
PRKCH-212ENST00000555110 UNC13AQ9UPW8 1703 aa8.19□□□□□ -1.1
PRKCH-212ENST00000555110 DCAF8L2P0C7V8 631 aa8.18□□□□□ -1.1
PRKCH-212ENST00000555110 CECR2Q9BXF3 1484 aa8.16□□□□□ -1.1
PRKCH-212ENST00000555110 DNAJC5Q9H3Z4 198 aa8.11□□□□□ -1.11
PRKCH-212ENST00000555110 CC2D2AQ9P2K1 1620 aa8.11□□□□□ -1.11
PRKCH-212ENST00000555110 EIF4G1Q04637 1599 aaKnown RBP8.07□□□□□ -1.12
PRKCH-212ENST00000555110 DCAF1Q9Y4B6 1507 aa8.07□□□□□ -1.12
PRKCH-212ENST00000555110 ZCCHC6Q5VYS8 1495 aaKnown RBP8.03□□□□□ -1.12
PRKCH-212ENST00000555110 AEBP2Q6ZN18 517 aaPredicted RBP7.98□□□□□ -1.13
PRKCH-212ENST00000555110 SCRIBQ14160 1630 aa7.97□□□□□ -1.13
PRKCH-212ENST00000555110 CUX2O14529 1486 aa7.92□□□□□ -1.14
PRKCH-212ENST00000555110 ERCC6Q03468 1493 aa7.81□□□□□ -1.16
PRKCH-212ENST00000555110 NCAPD3P42695 1498 aa7.77□□□□□ -1.17
PRKCH-212ENST00000555110 SLC24A1O60721 1099 aa7.72□□□□□ -1.17
PRKCH-212ENST00000555110 HMGXB3Q12766 1538 aa7.71□□□□□ -1.18
PRKCH-212ENST00000555110 ATAD2BQ9ULI0 1458 aa7.7□□□□□ -1.18
PRKCH-212ENST00000555110 SMARCA2P51531 1590 aa7.68□□□□□ -1.18
PRKCH-212ENST00000555110 THOC2Q8NI27 1593 aaKnown RBP7.65□□□□□ -1.18
PRKCH-212ENST00000555110 NESP48681 1621 aa7.64□□□□□ -1.19
PRKCH-212ENST00000555110 LAMC3Q9Y6N6 1575 aa7.62□□□□□ -1.19
PRKCH-212ENST00000555110 BAZ1BQ9UIG0 1483 aaKnown RBP7.62□□□□□ -1.19
PRKCH-212ENST00000555110 SMARCA4P51532 1647 aa7.61□□□□□ -1.19
PRKCH-212ENST00000555110 PDS5BQ9NTI5 1447 aa7.61□□□□□ -1.19
PRKCH-212ENST00000555110 TRIM41Q8WV44 630 aa7.6□□□□□ -1.19
PRKCH-212ENST00000555110 EHMT2Q96KQ7 1210 aa7.59□□□□□ -1.19
PRKCH-212ENST00000555110 PEG3Q9GZU2 1588 aa7.59□□□□□ -1.2
PRKCH-212ENST00000555110 BAZ1AQ9NRL2 1556 aaPredicted RBP7.57□□□□□ -1.2
PRKCH-212ENST00000555110 PHF23Q9BUL5 403 aaPredicted RBP7.56□□□□□ -1.2
PRKCH-212ENST00000555110 MRC2Q9UBG0 1479 aa7.54□□□□□ -1.2
PRKCH-212ENST00000555110 WDR62O43379 1518 aa7.52□□□□□ -1.2
PRKCH-212ENST00000555110 CADPSQ9ULU8 1353 aa7.51□□□□□ -1.21
PRKCH-212ENST00000555110 KIF21AQ7Z4S6 1674 aa7.51□□□□□ -1.21
PRKCH-212ENST00000555110 OSCARQ8IYS5 282 aa7.46□□□□□ -1.22
PRKCH-212ENST00000555110 CEP164Q9UPV0 1460 aa7.45□□□□□ -1.22
PRKCH-212ENST00000555110 MROH2BQ7Z745 1585 aa7.45□□□□□ -1.22
PRKCH-212ENST00000555110 FANCD2Q9BXW9 1451 aa7.42□□□□□ -1.22
PRKCH-212ENST00000555110 CFTRP13569 1480 aa7.39□□□□□ -1.23
PRKCH-212ENST00000555110 RIMBP3CA6NJZ7 1639 aa7.36□□□□□ -1.23
PRKCH-212ENST00000555110 RIMBP3BA6NNM3 1639 aa7.36□□□□□ -1.23
PRKCH-212ENST00000555110 RIMBP3Q9UFD9 1639 aa7.36□□□□□ -1.23
PRKCH-212ENST00000555110 ARHGEF11O15085 1522 aa7.36□□□□□ -1.23
PRKCH-212ENST00000555110 URB2Q14146 1524 aaKnown RBP7.36□□□□□ -1.23
PRKCH-212ENST00000555110 IFT140Q96RY7 1462 aa7.33□□□□□ -1.24
PRKCH-212ENST00000555110 PLPPR3Q6T4P5 718 aa7.32□□□□□ -1.24
PRKCH-212ENST00000555110 WIZO95785 1651 aa7.3□□□□□ -1.24
PRKCH-212ENST00000555110 RSF1Q96T23 1441 aaPredicted RBP7.29□□□□□ -1.24
PRKCH-212ENST00000555110 ZNF608Q9ULD9 1512 aaPredicted RBP7.29□□□□□ -1.24
PRKCH-212ENST00000555110 TOP2AP11388 1531 aaKnown RBP7.28□□□□□ -1.24
PRKCH-212ENST00000555110 ARAP1Q96P48 1450 aa7.27□□□□□ -1.25
PRKCH-212ENST00000555110 CYB5RLQ6IPT4 315 aa7.26□□□□□ -1.25
PRKCH-212ENST00000555110 ABCC8Q09428 1581 aa7.25□□□□□ -1.25
PRKCH-212ENST00000555110 TRHP20396 242 aaPredicted RBP7.25□□□□□ -1.25
PRKCH-212ENST00000555110 EIF4G3O43432 1585 aaKnown RBP7.25□□□□□ -1.25
PRKCH-212ENST00000555110 TOPBP1Q92547 1522 aa7.24□□□□□ -1.25
PRKCH-212ENST00000555110 PRDM2Q13029 1718 aa7.21□□□□□ -1.26
PRKCH-212ENST00000555110 DNMBPQ6XZF7 1577 aa7.2□□□□□ -1.26
PRKCH-212ENST00000555110 AQRO60306 1485 aaKnown RBP eCLIP7.18□□□□□ -1.26
PRKCH-212ENST00000555110 RTN4Q9NQC3 1192 aaKnown RBP7.18□□□□□ -1.26
PRKCH-212ENST00000555110 TARBP1Q13395 1621 aaKnown RBP7.18□□□□□ -1.26
PRKCH-212ENST00000555110 CCDC88BA6NC98 1476 aa7.17□□□□□ -1.26
PRKCH-212ENST00000555110 CLASP1Q7Z460 1538 aa7.17□□□□□ -1.26
PRKCH-212ENST00000555110 WDR97A6NE52 1622 aa7.17□□□□□ -1.26
PRKCH-212ENST00000555110 CHD1O14646 1710 aa7.17□□□□□ -1.26
PRKCH-212ENST00000555110 POLA1P09884 1462 aaPredicted RBP7.16□□□□□ -1.26
PRKCH-212ENST00000555110 FBLN2P98095 1184 aa7.15□□□□□ -1.26
PRKCH-212ENST00000555110 CSRNP3Q8WYN3 585 aa7.15□□□□□ -1.26
PRKCH-212ENST00000555110 MAGI1Q96QZ7 1491 aaPredicted RBP7.15□□□□□ -1.27
PRKCH-212ENST00000555110 SYNJ1O43426 1573 aa7.15□□□□□ -1.27
PRKCH-212ENST00000555110 KCNA4P22459 653 aa7.14□□□□□ -1.27
PRKCH-212ENST00000555110 SNAPC4Q5SXM2 1469 aa7.14□□□□□ -1.27
PRKCH-212ENST00000555110 SYNJ2O15056 1496 aa7.11□□□□□ -1.27
PRKCH-212ENST00000555110 GRIN2BQ13224 1484 aa7.11□□□□□ -1.27
PRKCH-212ENST00000555110 GAPVD1Q14C86 1478 aa7.11□□□□□ -1.27
PRKCH-212ENST00000555110 SOGA1O94964 1423 aa7.1□□□□□ -1.27
PRKCH-212ENST00000555110 TDRD9Q8NDG6 1382 aaKnown RBP7.1□□□□□ -1.27
PRKCH-212ENST00000555110 CHMP7Q8WUX9 453 aaPredicted RBP7.1□□□□□ -1.27
PRKCH-212ENST00000555110 RAD54L2Q9Y4B4 1467 aa7.1□□□□□ -1.27
PRKCH-212ENST00000555110 FGD5Q6ZNL6 1462 aa7.07□□□□□ -1.28
PRKCH-212ENST00000555110 CUX1P39880 1505 aa7.03□□□□□ -1.28
PRKCH-212ENST00000555110 NUP160Q12769 1436 aa7.01□□□□□ -1.29
PRKCH-212ENST00000555110 ABCA10Q8WWZ4 1543 aa7.01□□□□□ -1.29
PRKCH-212ENST00000555110 GRIN2AQ12879 1464 aa7□□□□□ -1.29
PRKCH-212ENST00000555110 ABCA5Q8WWZ7 1642 aa7□□□□□ -1.29
PRKCH-212ENST00000555110 CEP170Q5SW79 1584 aa6.99□□□□□ -1.29
PRKCH-212ENST00000555110 PBRM1Q86U86 1689 aa6.98□□□□□ -1.29
PRKCH-212ENST00000555110 ADAMTS12P58397 1594 aa6.98□□□□□ -1.29
PRKCH-212ENST00000555110 ERCC6L2Q5T890 1561 aa6.98□□□□□ -1.29
PRKCH-212ENST00000555110 SHROOM2Q13796 1616 aa6.97□□□□□ -1.29
PRKCH-212ENST00000555110 FHAD1B1AJZ9 1412 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms