RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
PSMC6-207ENST00000554952 AEBP2Q6ZN18 517 aaPredicted RBP28.09■■■□□ 2.09
PSMC6-207ENST00000554952 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
PSMC6-207ENST00000554952 CCDC180Q9P1Z9 1646 aa26.09■■□□□ 1.77
PSMC6-207ENST00000554952 ABCC9O60706 1549 aa26.05■■□□□ 1.76
PSMC6-207ENST00000554952 DCAF8L2P0C7V8 631 aa24.84■■□□□ 1.57
PSMC6-207ENST00000554952 RB1CC1Q8TDY2 1594 aa24.81■■□□□ 1.56
PSMC6-207ENST00000554952 NACADO15069 1562 aa24.68■■□□□ 1.54
PSMC6-207ENST00000554952 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.49
PSMC6-207ENST00000554952 MYO15BQ96JP2 1530 aa24.36■■□□□ 1.49
PSMC6-207ENST00000554952 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
PSMC6-207ENST00000554952 ZCCHC6Q5VYS8 1495 aaKnown RBP24.24■■□□□ 1.47
PSMC6-207ENST00000554952 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.46
PSMC6-207ENST00000554952 DCAF1Q9Y4B6 1507 aa24.12■■□□□ 1.45
PSMC6-207ENST00000554952 BICRAQ9NZM4 1560 aa24.06■■□□□ 1.44
PSMC6-207ENST00000554952 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
PSMC6-207ENST00000554952 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
PSMC6-207ENST00000554952 SHROOM4Q9ULL8 1493 aa23.71■■□□□ 1.39
PSMC6-207ENST00000554952 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
PSMC6-207ENST00000554952 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
PSMC6-207ENST00000554952 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
PSMC6-207ENST00000554952 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
PSMC6-207ENST00000554952 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
PSMC6-207ENST00000554952 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
PSMC6-207ENST00000554952 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
PSMC6-207ENST00000554952 SMARCA2P51531 1590 aa22.69■■□□□ 1.22
PSMC6-207ENST00000554952 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
PSMC6-207ENST00000554952 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
PSMC6-207ENST00000554952 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
PSMC6-207ENST00000554952 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
PSMC6-207ENST00000554952 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
PSMC6-207ENST00000554952 ERCC6Q03468 1493 aa22.48■■□□□ 1.19
PSMC6-207ENST00000554952 FOXD1Q16676 465 aa22.44■■□□□ 1.18
PSMC6-207ENST00000554952 NESP48681 1621 aa22.42■■□□□ 1.18
PSMC6-207ENST00000554952 CUX2O14529 1486 aa22.32■■□□□ 1.16
PSMC6-207ENST00000554952 WIZO95785 1651 aa22.29■■□□□ 1.16
PSMC6-207ENST00000554952 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
PSMC6-207ENST00000554952 DNAJC5Q9H3Z4 198 aa22.21■■□□□ 1.15
PSMC6-207ENST00000554952 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
PSMC6-207ENST00000554952 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
PSMC6-207ENST00000554952 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
PSMC6-207ENST00000554952 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
PSMC6-207ENST00000554952 THOC2Q8NI27 1593 aaKnown RBP22.06■■□□□ 1.12
PSMC6-207ENST00000554952 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
PSMC6-207ENST00000554952 MRC2Q9UBG0 1479 aa21.93■■□□□ 1.1
PSMC6-207ENST00000554952 CFTRP13569 1480 aa21.91■■□□□ 1.1
PSMC6-207ENST00000554952 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
PSMC6-207ENST00000554952 CEP164Q9UPV0 1460 aa21.88■■□□□ 1.09
PSMC6-207ENST00000554952 WDR62O43379 1518 aa21.83■■□□□ 1.09
PSMC6-207ENST00000554952 CCDC88BA6NC98 1476 aa21.8■■□□□ 1.08
PSMC6-207ENST00000554952 URB2Q14146 1524 aaKnown RBP21.68■■□□□ 1.06
PSMC6-207ENST00000554952 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
PSMC6-207ENST00000554952 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
PSMC6-207ENST00000554952 TOPBP1Q92547 1522 aa21.48■■□□□ 1.03
PSMC6-207ENST00000554952 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
PSMC6-207ENST00000554952 ABCC8Q09428 1581 aa21.45■■□□□ 1.02
PSMC6-207ENST00000554952 IFT140Q96RY7 1462 aa21.45■■□□□ 1.02
PSMC6-207ENST00000554952 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
PSMC6-207ENST00000554952 DNMBPQ6XZF7 1577 aa21.39■■□□□ 1.01
PSMC6-207ENST00000554952 POTEDQ86YR6 584 aa21.36■■□□□ 1.01
PSMC6-207ENST00000554952 TRIM41Q8WV44 630 aa21.36■■□□□ 1.01
PSMC6-207ENST00000554952 AQRO60306 1485 aaKnown RBP eCLIP21.27■■□□□ 11e-7■■■■■ 27.9
PSMC6-207ENST00000554952 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
PSMC6-207ENST00000554952 SOGA1O94964 1423 aa21.24■□□□□ 0.99
PSMC6-207ENST00000554952 TARBP1Q13395 1621 aaKnown RBP21.24■□□□□ 0.99
PSMC6-207ENST00000554952 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
PSMC6-207ENST00000554952 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
PSMC6-207ENST00000554952 FBLN2P98095 1184 aa21.2■□□□□ 0.98
PSMC6-207ENST00000554952 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
PSMC6-207ENST00000554952 FGD5Q6ZNL6 1462 aa21.17■□□□□ 0.98
PSMC6-207ENST00000554952 CUX1P39880 1505 aa21.17■□□□□ 0.98
PSMC6-207ENST00000554952 MSH5O43196 834 aa21.15■□□□□ 0.98
PSMC6-207ENST00000554952 CHD1O14646 1710 aa21.05■□□□□ 0.96
PSMC6-207ENST00000554952 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
PSMC6-207ENST00000554952 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
PSMC6-207ENST00000554952 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
PSMC6-207ENST00000554952 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
PSMC6-207ENST00000554952 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
PSMC6-207ENST00000554952 ARHGEF11O15085 1522 aa21■□□□□ 0.95
PSMC6-207ENST00000554952 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
PSMC6-207ENST00000554952 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
PSMC6-207ENST00000554952 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
PSMC6-207ENST00000554952 GAPVD1Q14C86 1478 aa20.95■□□□□ 0.94
PSMC6-207ENST00000554952 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
PSMC6-207ENST00000554952 WRNQ14191 1432 aaPredicted RBP eCLIP20.93■□□□□ 0.94
PSMC6-207ENST00000554952 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
PSMC6-207ENST00000554952 SYNJ2O15056 1496 aa20.89■□□□□ 0.94
PSMC6-207ENST00000554952 PIAS4Q8N2W9 510 aaPredicted RBP20.87■□□□□ 0.93
PSMC6-207ENST00000554952 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
PSMC6-207ENST00000554952 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
PSMC6-207ENST00000554952 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
PSMC6-207ENST00000554952 ABCA5Q8WWZ7 1642 aa20.83■□□□□ 0.93
PSMC6-207ENST00000554952 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
PSMC6-207ENST00000554952 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
PSMC6-207ENST00000554952 CLASP1Q7Z460 1538 aa20.8■□□□□ 0.92
PSMC6-207ENST00000554952 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
PSMC6-207ENST00000554952 GRIN2AQ12879 1464 aa20.7■□□□□ 0.9
PSMC6-207ENST00000554952 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
PSMC6-207ENST00000554952 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
PSMC6-207ENST00000554952 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms