RNA–Protein interactions for RNA: ENST00000554938.1

LIN52-204, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 4

Gene LIN52, Length 566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-204ENST00000554938 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.01
LIN52-204ENST00000554938 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
LIN52-204ENST00000554938 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
LIN52-204ENST00000554938 DCAF8L2P0C7V8 631 aa17.7■□□□□ 0.42
LIN52-204ENST00000554938 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
LIN52-204ENST00000554938 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
LIN52-204ENST00000554938 ABCC9O60706 1549 aa17.45■□□□□ 0.38
LIN52-204ENST00000554938 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
LIN52-204ENST00000554938 NACADO15069 1562 aa17.31■□□□□ 0.36
LIN52-204ENST00000554938 RB1CC1Q8TDY2 1594 aa17.14■□□□□ 0.33
LIN52-204ENST00000554938 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
LIN52-204ENST00000554938 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
LIN52-204ENST00000554938 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
LIN52-204ENST00000554938 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
LIN52-204ENST00000554938 CECR2Q9BXF3 1484 aa16.58■□□□□ 0.24
LIN52-204ENST00000554938 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
LIN52-204ENST00000554938 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
LIN52-204ENST00000554938 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
LIN52-204ENST00000554938 PABPN1Q86U42 306 aaKnown RBP eCLIP16.5■□□□□ 0.23
LIN52-204ENST00000554938 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
LIN52-204ENST00000554938 WIZO95785 1651 aa16.4■□□□□ 0.22
LIN52-204ENST00000554938 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
LIN52-204ENST00000554938 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.2
LIN52-204ENST00000554938 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
LIN52-204ENST00000554938 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
LIN52-204ENST00000554938 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
LIN52-204ENST00000554938 ATAD2BQ9ULI0 1458 aa16.1■□□□□ 0.17
LIN52-204ENST00000554938 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
LIN52-204ENST00000554938 EIF4G1Q04637 1599 aaKnown RBP16.05■□□□□ 0.16
LIN52-204ENST00000554938 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
LIN52-204ENST00000554938 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
LIN52-204ENST00000554938 NCAPD3P42695 1498 aa15.95■□□□□ 0.14
LIN52-204ENST00000554938 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
LIN52-204ENST00000554938 CC2D2AQ9P2K1 1620 aa15.8■□□□□ 0.12
LIN52-204ENST00000554938 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
LIN52-204ENST00000554938 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.11
LIN52-204ENST00000554938 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
LIN52-204ENST00000554938 WRNQ14191 1432 aaPredicted RBP eCLIP15.67■□□□□ 0.1
LIN52-204ENST00000554938 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
LIN52-204ENST00000554938 CFTRP13569 1480 aa15.62■□□□□ 0.09
LIN52-204ENST00000554938 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
LIN52-204ENST00000554938 CADPSQ9ULU8 1353 aa15.57■□□□□ 0.08
LIN52-204ENST00000554938 EEA1Q15075 1411 aa15.57■□□□□ 0.08
LIN52-204ENST00000554938 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
LIN52-204ENST00000554938 TOP2BQ02880 1626 aa15.52■□□□□ 0.08
LIN52-204ENST00000554938 BIVM-ERCC5R4GMW8 1640 aa15.52■□□□□ 0.08
LIN52-204ENST00000554938 SOGA1O94964 1423 aa15.49■□□□□ 0.07
LIN52-204ENST00000554938 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
LIN52-204ENST00000554938 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
LIN52-204ENST00000554938 CUX1P39880 1505 aa15.42■□□□□ 0.06
LIN52-204ENST00000554938 RUSC2Q8N2Y8 1516 aa15.42■□□□□ 0.06
LIN52-204ENST00000554938 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
LIN52-204ENST00000554938 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
LIN52-204ENST00000554938 NESP48681 1621 aa15.34■□□□□ 0.05
LIN52-204ENST00000554938 GOLGA3Q08378 1498 aa15.33■□□□□ 0.05
LIN52-204ENST00000554938 TNIKQ9UKE5 1360 aa15.33■□□□□ 0.04
LIN52-204ENST00000554938 CEP164Q9UPV0 1460 aa15.32■□□□□ 0.04
LIN52-204ENST00000554938 KIF21BO75037 1637 aa15.32■□□□□ 0.04
LIN52-204ENST00000554938 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
LIN52-204ENST00000554938 PDS5BQ9NTI5 1447 aa15.3■□□□□ 0.04
LIN52-204ENST00000554938 KIF27Q86VH2 1401 aa15.28■□□□□ 0.04
LIN52-204ENST00000554938 DNMBPQ6XZF7 1577 aa15.28■□□□□ 0.04
LIN52-204ENST00000554938 FGD5Q6ZNL6 1462 aa15.25■□□□□ 0.03
LIN52-204ENST00000554938 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
LIN52-204ENST00000554938 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
LIN52-204ENST00000554938 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
LIN52-204ENST00000554938 CUX2O14529 1486 aa15.19■□□□□ 0.02
LIN52-204ENST00000554938 ERICH3Q5RHP9 1530 aa15.18■□□□□ 0.02
LIN52-204ENST00000554938 PRXQ9BXM0 1461 aa15.17■□□□□ 0.02
LIN52-204ENST00000554938 RAPGEF2Q9Y4G8 1499 aa15.16■□□□□ 0.02
LIN52-204ENST00000554938 TRIM26Q12899 539 aaPredicted RBP15.16■□□□□ 0.02
LIN52-204ENST00000554938 PCGF6Q9BYE7 350 aa15.15■□□□□ 0.02
LIN52-204ENST00000554938 URB2Q14146 1524 aaKnown RBP15.15■□□□□ 0.02
LIN52-204ENST00000554938 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
LIN52-204ENST00000554938 ABCA10Q8WWZ4 1543 aa15.12■□□□□ 0.01
LIN52-204ENST00000554938 IGF1RP08069 1367 aa15.11■□□□□ 0.01
LIN52-204ENST00000554938 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
LIN52-204ENST00000554938 CLIP1P30622 1438 aa15.09■□□□□ 0.01
LIN52-204ENST00000554938 CARMIL1Q5VZK9 1371 aa15.07■□□□□ 0
LIN52-204ENST00000554938 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
LIN52-204ENST00000554938 WDR97A6NE52 1622 aa15.06■□□□□ 0
LIN52-204ENST00000554938 CUL7Q14999 1698 aa15.01□□□□□ -0.01
LIN52-204ENST00000554938 ERCC6Q03468 1493 aa14.98□□□□□ -0.01
LIN52-204ENST00000554938 RANGAP1P46060 587 aaPredicted RBP14.98□□□□□ -0.01
LIN52-204ENST00000554938 TARBP1Q13395 1621 aaKnown RBP14.98□□□□□ -0.01
LIN52-204ENST00000554938 GAPVD1Q14C86 1478 aa14.97□□□□□ -0.01
LIN52-204ENST00000554938 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
LIN52-204ENST00000554938 VPS8Q8N3P4 1428 aa14.96□□□□□ -0.01
LIN52-204ENST00000554938 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
LIN52-204ENST00000554938 APLP2Q06481 763 aa14.95□□□□□ -0.02
LIN52-204ENST00000554938 PPARGC1BQ86YN6 1023 aaKnown RBP14.95□□□□□ -0.02
LIN52-204ENST00000554938 WDR62O43379 1518 aa14.95□□□□□ -0.02
LIN52-204ENST00000554938 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
LIN52-204ENST00000554938 PBRM1Q86U86 1689 aa14.89□□□□□ -0.03
LIN52-204ENST00000554938 CTTNBP2Q8WZ74 1663 aa14.88□□□□□ -0.03
LIN52-204ENST00000554938 ARAP1Q96P48 1450 aa14.88□□□□□ -0.03
LIN52-204ENST00000554938 THOC2Q8NI27 1593 aaKnown RBP14.86□□□□□ -0.03
LIN52-204ENST00000554938 ARHGAP35Q9NRY4 1499 aa14.86□□□□□ -0.03
LIN52-204ENST00000554938 HRCP23327 699 aa14.84□□□□□ -0.03
LIN52-204ENST00000554938 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms