RNA–Protein interactions for RNA: ENST00000554839.1

NAB2-204, Transcript of NGFI-A binding protein 2, humanhuman

TSL 3

Gene NAB2, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAB2-204ENST00000554839 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
NAB2-204ENST00000554839 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
NAB2-204ENST00000554839 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
NAB2-204ENST00000554839 DCAF1Q9Y4B6 1507 aa25.15■■□□□ 1.62
NAB2-204ENST00000554839 ABCC9O60706 1549 aa25.12■■□□□ 1.61
NAB2-204ENST00000554839 MYO15BQ96JP2 1530 aa25.01■■□□□ 1.59
NAB2-204ENST00000554839 NACADO15069 1562 aa24.84■■□□□ 1.57
NAB2-204ENST00000554839 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
NAB2-204ENST00000554839 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
NAB2-204ENST00000554839 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
NAB2-204ENST00000554839 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
NAB2-204ENST00000554839 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
NAB2-204ENST00000554839 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
NAB2-204ENST00000554839 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
NAB2-204ENST00000554839 BAZ1AQ9NRL2 1556 aaPredicted RBP23.41■■□□□ 1.34
NAB2-204ENST00000554839 CECR2Q9BXF3 1484 aa23.35■■□□□ 1.33
NAB2-204ENST00000554839 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
NAB2-204ENST00000554839 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
NAB2-204ENST00000554839 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
NAB2-204ENST00000554839 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.3
NAB2-204ENST00000554839 PEG3Q9GZU2 1588 aa23.13■■□□□ 1.29
NAB2-204ENST00000554839 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
NAB2-204ENST00000554839 WIZO95785 1651 aa23.04■■□□□ 1.28
NAB2-204ENST00000554839 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
NAB2-204ENST00000554839 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
NAB2-204ENST00000554839 TOP2AP11388 1531 aaKnown RBP22.9■■□□□ 1.26
NAB2-204ENST00000554839 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
NAB2-204ENST00000554839 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
NAB2-204ENST00000554839 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
NAB2-204ENST00000554839 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
NAB2-204ENST00000554839 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
NAB2-204ENST00000554839 DNAJC5BQ9UF47 199 aa22.31■■□□□ 1.16
NAB2-204ENST00000554839 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
NAB2-204ENST00000554839 CFTRP13569 1480 aa22.25■■□□□ 1.15
NAB2-204ENST00000554839 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
NAB2-204ENST00000554839 LAMC3Q9Y6N6 1575 aa22.19■■□□□ 1.14
NAB2-204ENST00000554839 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
NAB2-204ENST00000554839 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
NAB2-204ENST00000554839 NESP48681 1621 aa21.95■■□□□ 1.1
NAB2-204ENST00000554839 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
NAB2-204ENST00000554839 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
NAB2-204ENST00000554839 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
NAB2-204ENST00000554839 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
NAB2-204ENST00000554839 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
NAB2-204ENST00000554839 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
NAB2-204ENST00000554839 TOP2BQ02880 1626 aa21.86■■□□□ 1.09
NAB2-204ENST00000554839 KIF21AQ7Z4S6 1674 aa21.83■■□□□ 1.09
NAB2-204ENST00000554839 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
NAB2-204ENST00000554839 CUX1P39880 1505 aa21.77■■□□□ 1.08
NAB2-204ENST00000554839 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
NAB2-204ENST00000554839 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
NAB2-204ENST00000554839 MRC2Q9UBG0 1479 aa21.67■■□□□ 1.06
NAB2-204ENST00000554839 ERCC6Q03468 1493 aa21.65■■□□□ 1.06
NAB2-204ENST00000554839 URB2Q14146 1524 aaKnown RBP21.65■■□□□ 1.06
NAB2-204ENST00000554839 EEA1Q15075 1411 aa21.61■■□□□ 1.05
NAB2-204ENST00000554839 WDR62O43379 1518 aa21.6■■□□□ 1.05
NAB2-204ENST00000554839 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.04
NAB2-204ENST00000554839 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
NAB2-204ENST00000554839 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
NAB2-204ENST00000554839 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
NAB2-204ENST00000554839 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
NAB2-204ENST00000554839 SOGA1O94964 1423 aa21.45■■□□□ 1.02
NAB2-204ENST00000554839 KIF27Q86VH2 1401 aa21.44■■□□□ 1.02
NAB2-204ENST00000554839 TARBP1Q13395 1621 aaKnown RBP21.42■■□□□ 1.02
NAB2-204ENST00000554839 IFT140Q96RY7 1462 aa21.39■■□□□ 1.02
NAB2-204ENST00000554839 CUX2O14529 1486 aa21.37■■□□□ 1.01
NAB2-204ENST00000554839 RAD54L2Q9Y4B4 1467 aa21.36■■□□□ 1.01
NAB2-204ENST00000554839 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
NAB2-204ENST00000554839 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
NAB2-204ENST00000554839 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
NAB2-204ENST00000554839 KIF21BO75037 1637 aa21.29■■□□□ 1
NAB2-204ENST00000554839 FAM9AQ8IZU1 332 aaPredicted RBP21.27■■□□□ 1
NAB2-204ENST00000554839 ERICH3Q5RHP9 1530 aa21.25■□□□□ 0.99
NAB2-204ENST00000554839 GAPVD1Q14C86 1478 aa21.24■□□□□ 0.99
NAB2-204ENST00000554839 CUL7Q14999 1698 aa21.24■□□□□ 0.99
NAB2-204ENST00000554839 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
NAB2-204ENST00000554839 IGF1RP08069 1367 aa21.21■□□□□ 0.99
NAB2-204ENST00000554839 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
NAB2-204ENST00000554839 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
NAB2-204ENST00000554839 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
NAB2-204ENST00000554839 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
NAB2-204ENST00000554839 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
NAB2-204ENST00000554839 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
NAB2-204ENST00000554839 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
NAB2-204ENST00000554839 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
NAB2-204ENST00000554839 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.977e-7■■■■■ 35.2
NAB2-204ENST00000554839 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
NAB2-204ENST00000554839 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
NAB2-204ENST00000554839 MAGI1Q96QZ7 1491 aaPredicted RBP21.06■□□□□ 0.96
NAB2-204ENST00000554839 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
NAB2-204ENST00000554839 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
NAB2-204ENST00000554839 UBTFP17480 764 aaKnown RBP20.97■□□□□ 0.95
NAB2-204ENST00000554839 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
NAB2-204ENST00000554839 CTTNBP2Q8WZ74 1663 aa20.94■□□□□ 0.94
NAB2-204ENST00000554839 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
NAB2-204ENST00000554839 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
NAB2-204ENST00000554839 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
NAB2-204ENST00000554839 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.93
NAB2-204ENST00000554839 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
NAB2-204ENST00000554839 CHD1O14646 1710 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms