RNA–Protein interactions for RNA: ENST00000554621.1

CFAP54-206, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 724 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-206ENST00000554621 NISCHQ9Y2I1 1504 aa36.5■■■■□ 3.43
CFAP54-206ENST00000554621 ABCC9O60706 1549 aa33.23■■■□□ 2.91
CFAP54-206ENST00000554621 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
CFAP54-206ENST00000554621 RB1CC1Q8TDY2 1594 aa31.55■■■□□ 2.64
CFAP54-206ENST00000554621 DNAJC5BQ9UF47 199 aa31.34■■■□□ 2.61
CFAP54-206ENST00000554621 NACADO15069 1562 aa31.24■■■□□ 2.59
CFAP54-206ENST00000554621 DCAF8L2P0C7V8 631 aa31.17■■■□□ 2.58
CFAP54-206ENST00000554621 PABPN1Q86U42 306 aaKnown RBP eCLIP30.91■■■□□ 2.54
CFAP54-206ENST00000554621 MYO15BQ96JP2 1530 aa30.68■■■□□ 2.5
CFAP54-206ENST00000554621 UNC13AQ9UPW8 1703 aa30.63■■■□□ 2.49
CFAP54-206ENST00000554621 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.47
CFAP54-206ENST00000554621 SHROOM4Q9ULL8 1493 aa30.21■■■□□ 2.43
CFAP54-206ENST00000554621 ZCCHC6Q5VYS8 1495 aaKnown RBP30.15■■■□□ 2.42
CFAP54-206ENST00000554621 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
CFAP54-206ENST00000554621 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
CFAP54-206ENST00000554621 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
CFAP54-206ENST00000554621 SCRIBQ14160 1630 aa29.95■■■□□ 2.38
CFAP54-206ENST00000554621 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
CFAP54-206ENST00000554621 DNAJC5Q9H3Z4 198 aa29.17■■■□□ 2.26
CFAP54-206ENST00000554621 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
CFAP54-206ENST00000554621 CUX2O14529 1486 aa28.84■■■□□ 2.21
CFAP54-206ENST00000554621 NCAPD3P42695 1498 aa28.81■■■□□ 2.2
CFAP54-206ENST00000554621 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
CFAP54-206ENST00000554621 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
CFAP54-206ENST00000554621 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
CFAP54-206ENST00000554621 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
CFAP54-206ENST00000554621 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
CFAP54-206ENST00000554621 BAZ1AQ9NRL2 1556 aaPredicted RBP28.42■■■□□ 2.14
CFAP54-206ENST00000554621 NESP48681 1621 aa28.39■■■□□ 2.13
CFAP54-206ENST00000554621 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
CFAP54-206ENST00000554621 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
CFAP54-206ENST00000554621 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
CFAP54-206ENST00000554621 THOC2Q8NI27 1593 aaKnown RBP28.15■■■□□ 2.1
CFAP54-206ENST00000554621 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
CFAP54-206ENST00000554621 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
CFAP54-206ENST00000554621 CADPSQ9ULU8 1353 aa27.97■■■□□ 2.07
CFAP54-206ENST00000554621 MRC2Q9UBG0 1479 aa27.87■■■□□ 2.05
CFAP54-206ENST00000554621 TRIM41Q8WV44 630 aa27.84■■■□□ 2.05
CFAP54-206ENST00000554621 WDR62O43379 1518 aa27.75■■■□□ 2.03
CFAP54-206ENST00000554621 WIZO95785 1651 aa27.72■■■□□ 2.03
CFAP54-206ENST00000554621 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
CFAP54-206ENST00000554621 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
CFAP54-206ENST00000554621 OSCARQ8IYS5 282 aa27.56■■■□□ 2
CFAP54-206ENST00000554621 CFTRP13569 1480 aa27.52■■■□□ 2
CFAP54-206ENST00000554621 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
CFAP54-206ENST00000554621 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
CFAP54-206ENST00000554621 URB2Q14146 1524 aaKnown RBP27.34■■□□□ 1.97
CFAP54-206ENST00000554621 IFT140Q96RY7 1462 aa27.19■■□□□ 1.94
CFAP54-206ENST00000554621 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
CFAP54-206ENST00000554621 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
CFAP54-206ENST00000554621 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
CFAP54-206ENST00000554621 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
CFAP54-206ENST00000554621 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
CFAP54-206ENST00000554621 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
CFAP54-206ENST00000554621 ZNF608Q9ULD9 1512 aaPredicted RBP27.05■■□□□ 1.92
CFAP54-206ENST00000554621 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
CFAP54-206ENST00000554621 ARHGEF11O15085 1522 aa26.96■■□□□ 1.91
CFAP54-206ENST00000554621 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
CFAP54-206ENST00000554621 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
CFAP54-206ENST00000554621 CYB5RLQ6IPT4 315 aa26.9■■□□□ 1.9
CFAP54-206ENST00000554621 FBLN2P98095 1184 aa26.89■■□□□ 1.9
CFAP54-206ENST00000554621 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.88
CFAP54-206ENST00000554621 TRHP20396 242 aaPredicted RBP26.8■■□□□ 1.88
CFAP54-206ENST00000554621 CHD1O14646 1710 aa26.76■■□□□ 1.87
CFAP54-206ENST00000554621 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
CFAP54-206ENST00000554621 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
CFAP54-206ENST00000554621 SOGA1O94964 1423 aa26.69■■□□□ 1.86
CFAP54-206ENST00000554621 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
CFAP54-206ENST00000554621 TDRD9Q8NDG6 1382 aaKnown RBP26.64■■□□□ 1.86
CFAP54-206ENST00000554621 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.86
CFAP54-206ENST00000554621 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
CFAP54-206ENST00000554621 WDR97A6NE52 1622 aa26.59■■□□□ 1.85
CFAP54-206ENST00000554621 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
CFAP54-206ENST00000554621 FGD5Q6ZNL6 1462 aa26.54■■□□□ 1.84
CFAP54-206ENST00000554621 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
CFAP54-206ENST00000554621 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
CFAP54-206ENST00000554621 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
CFAP54-206ENST00000554621 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
CFAP54-206ENST00000554621 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
CFAP54-206ENST00000554621 CUX1P39880 1505 aa26.4■■□□□ 1.82
CFAP54-206ENST00000554621 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
CFAP54-206ENST00000554621 GAPVD1Q14C86 1478 aa26.34■■□□□ 1.81
CFAP54-206ENST00000554621 PBRM1Q86U86 1689 aa26.27■■□□□ 1.8
CFAP54-206ENST00000554621 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
CFAP54-206ENST00000554621 ABCA5Q8WWZ7 1642 aa26.15■■□□□ 1.78
CFAP54-206ENST00000554621 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.78
CFAP54-206ENST00000554621 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
CFAP54-206ENST00000554621 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
CFAP54-206ENST00000554621 FHAD1B1AJZ9 1412 aa26.01■■□□□ 1.75
CFAP54-206ENST00000554621 ADAMTS12P58397 1594 aa26■■□□□ 1.75
CFAP54-206ENST00000554621 NUP160Q12769 1436 aa25.99■■□□□ 1.75
CFAP54-206ENST00000554621 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
CFAP54-206ENST00000554621 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
CFAP54-206ENST00000554621 ERCC6L2Q5T890 1561 aa25.94■■□□□ 1.74
CFAP54-206ENST00000554621 ERICH3Q5RHP9 1530 aa25.92■■□□□ 1.74
CFAP54-206ENST00000554621 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
CFAP54-206ENST00000554621 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
CFAP54-206ENST00000554621 NPM1P06748 294 aaKnown RBP eCLIP25.87■■□□□ 1.73
CFAP54-206ENST00000554621 JPH4Q96JJ6 628 aa25.85■■□□□ 1.73
CFAP54-206ENST00000554621 PRG4Q92954 1404 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms