RNA–Protein interactions for RNA: ENST00000553893.5

ITGA7-207, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-207ENST00000553893 NISCHQ9Y2I1 1504 aa35.65■■■■□ 3.3
ITGA7-207ENST00000553893 ABCC9O60706 1549 aa32.35■■■□□ 2.77
ITGA7-207ENST00000553893 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
ITGA7-207ENST00000553893 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
ITGA7-207ENST00000553893 DNAJC5BQ9UF47 199 aa30.53■■■□□ 2.48
ITGA7-207ENST00000553893 NACADO15069 1562 aa30.48■■■□□ 2.47
ITGA7-207ENST00000553893 DCAF8L2P0C7V8 631 aa30.39■■■□□ 2.46
ITGA7-207ENST00000553893 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.41
ITGA7-207ENST00000553893 MYO15BQ96JP2 1530 aa29.99■■■□□ 2.39
ITGA7-207ENST00000553893 UNC13AQ9UPW8 1703 aa29.81■■■□□ 2.36
ITGA7-207ENST00000553893 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
ITGA7-207ENST00000553893 SHROOM4Q9ULL8 1493 aa29.48■■■□□ 2.31
ITGA7-207ENST00000553893 DCAF1Q9Y4B6 1507 aa29.48■■■□□ 2.31
ITGA7-207ENST00000553893 ZCCHC6Q5VYS8 1495 aaKnown RBP29.45■■■□□ 2.31
ITGA7-207ENST00000553893 CECR2Q9BXF3 1484 aa29.23■■■□□ 2.27
ITGA7-207ENST00000553893 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
ITGA7-207ENST00000553893 SCRIBQ14160 1630 aa29.17■■■□□ 2.26
ITGA7-207ENST00000553893 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
ITGA7-207ENST00000553893 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.14
ITGA7-207ENST00000553893 NCAPD3P42695 1498 aa28.15■■■□□ 2.1
ITGA7-207ENST00000553893 CUX2O14529 1486 aa28.08■■■□□ 2.09
ITGA7-207ENST00000553893 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
ITGA7-207ENST00000553893 ATAD2BQ9ULI0 1458 aa27.97■■■□□ 2.07
ITGA7-207ENST00000553893 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
ITGA7-207ENST00000553893 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
ITGA7-207ENST00000553893 SMARCA4P51532 1647 aa27.82■■■□□ 2.04
ITGA7-207ENST00000553893 BAZ1AQ9NRL2 1556 aaPredicted RBP27.74■■■□□ 2.03
ITGA7-207ENST00000553893 BAZ1BQ9UIG0 1483 aaKnown RBP27.73■■■□□ 2.03
ITGA7-207ENST00000553893 NESP48681 1621 aa27.65■■■□□ 2.02
ITGA7-207ENST00000553893 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
ITGA7-207ENST00000553893 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
ITGA7-207ENST00000553893 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
ITGA7-207ENST00000553893 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
ITGA7-207ENST00000553893 THOC2Q8NI27 1593 aaKnown RBP27.4■■□□□ 1.98
ITGA7-207ENST00000553893 CADPSQ9ULU8 1353 aa27.31■■□□□ 1.96
ITGA7-207ENST00000553893 KIF21AQ7Z4S6 1674 aa27.24■■□□□ 1.95
ITGA7-207ENST00000553893 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
ITGA7-207ENST00000553893 WDR62O43379 1518 aa27.05■■□□□ 1.92
ITGA7-207ENST00000553893 TRIM41Q8WV44 630 aa27.04■■□□□ 1.92
ITGA7-207ENST00000553893 WIZO95785 1651 aa27.04■■□□□ 1.92
ITGA7-207ENST00000553893 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
ITGA7-207ENST00000553893 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
ITGA7-207ENST00000553893 CFTRP13569 1480 aa26.88■■□□□ 1.89
ITGA7-207ENST00000553893 OSCARQ8IYS5 282 aa26.87■■□□□ 1.89
ITGA7-207ENST00000553893 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
ITGA7-207ENST00000553893 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
ITGA7-207ENST00000553893 URB2Q14146 1524 aaKnown RBP26.66■■□□□ 1.86
ITGA7-207ENST00000553893 IFT140Q96RY7 1462 aa26.51■■□□□ 1.83
ITGA7-207ENST00000553893 PRDM2Q13029 1718 aa26.47■■□□□ 1.83
ITGA7-207ENST00000553893 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
ITGA7-207ENST00000553893 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
ITGA7-207ENST00000553893 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
ITGA7-207ENST00000553893 TOPBP1Q92547 1522 aa26.37■■□□□ 1.81
ITGA7-207ENST00000553893 ZNF608Q9ULD9 1512 aaPredicted RBP26.37■■□□□ 1.81
ITGA7-207ENST00000553893 RIMBP3CA6NJZ7 1639 aa26.31■■□□□ 1.8
ITGA7-207ENST00000553893 RIMBP3BA6NNM3 1639 aa26.31■■□□□ 1.8
ITGA7-207ENST00000553893 RIMBP3Q9UFD9 1639 aa26.31■■□□□ 1.8
ITGA7-207ENST00000553893 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
ITGA7-207ENST00000553893 ARHGEF11O15085 1522 aa26.24■■□□□ 1.79
ITGA7-207ENST00000553893 CYB5RLQ6IPT4 315 aa26.2■■□□□ 1.78
ITGA7-207ENST00000553893 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.78
ITGA7-207ENST00000553893 FBLN2P98095 1184 aa26.19■■□□□ 1.78
ITGA7-207ENST00000553893 AQRO60306 1485 aaKnown RBP eCLIP26.17■■□□□ 1.78
ITGA7-207ENST00000553893 TARBP1Q13395 1621 aaKnown RBP26.09■■□□□ 1.77
ITGA7-207ENST00000553893 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
ITGA7-207ENST00000553893 SOGA1O94964 1423 aa26.05■■□□□ 1.76
ITGA7-207ENST00000553893 TRHP20396 242 aaPredicted RBP26.05■■□□□ 1.76
ITGA7-207ENST00000553893 CHD1O14646 1710 aa26.02■■□□□ 1.76
ITGA7-207ENST00000553893 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
ITGA7-207ENST00000553893 CHMP7Q8WUX9 453 aaPredicted RBP25.98■■□□□ 1.75
ITGA7-207ENST00000553893 RAD54L2Q9Y4B4 1467 aa25.97■■□□□ 1.75
ITGA7-207ENST00000553893 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
ITGA7-207ENST00000553893 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
ITGA7-207ENST00000553893 FGD5Q6ZNL6 1462 aa25.88■■□□□ 1.73
ITGA7-207ENST00000553893 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
ITGA7-207ENST00000553893 MAGI1Q96QZ7 1491 aaPredicted RBP25.86■■□□□ 1.73
ITGA7-207ENST00000553893 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
ITGA7-207ENST00000553893 SYNJ1O43426 1573 aa25.83■■□□□ 1.73
ITGA7-207ENST00000553893 SYNJ2O15056 1496 aa25.77■■□□□ 1.72
ITGA7-207ENST00000553893 CUX1P39880 1505 aa25.77■■□□□ 1.72
ITGA7-207ENST00000553893 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
ITGA7-207ENST00000553893 GAPVD1Q14C86 1478 aa25.71■■□□□ 1.71
ITGA7-207ENST00000553893 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
ITGA7-207ENST00000553893 AEBP2Q6ZN18 517 aaPredicted RBP25.57■■□□□ 1.68
ITGA7-207ENST00000553893 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
ITGA7-207ENST00000553893 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
ITGA7-207ENST00000553893 ABCA5Q8WWZ7 1642 aa25.5■■□□□ 1.67
ITGA7-207ENST00000553893 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
ITGA7-207ENST00000553893 FHAD1B1AJZ9 1412 aa25.39■■□□□ 1.66
ITGA7-207ENST00000553893 NUP160Q12769 1436 aa25.38■■□□□ 1.65
ITGA7-207ENST00000553893 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
ITGA7-207ENST00000553893 TOP2BQ02880 1626 aa25.33■■□□□ 1.65
ITGA7-207ENST00000553893 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
ITGA7-207ENST00000553893 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
ITGA7-207ENST00000553893 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
ITGA7-207ENST00000553893 ERCC6L2Q5T890 1561 aa25.27■■□□□ 1.64
ITGA7-207ENST00000553893 JPH4Q96JJ6 628 aa25.24■■□□□ 1.63
ITGA7-207ENST00000553893 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
ITGA7-207ENST00000553893 NPM1P06748 294 aaKnown RBP eCLIP25.22■■□□□ 1.63
ITGA7-207ENST00000553893 PRG4Q92954 1404 aaPredicted RBP25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 314.5 ms