RNA–Protein interactions for RNA: ENST00000553680.1

KLC1-215, Transcript of kinesin light chain 1, humanhuman

TSL 2

Gene KLC1, Length 519 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-215ENST00000553680 NISCHQ9Y2I1 1504 aa20.46■□□□□ 0.87
KLC1-215ENST00000553680 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
KLC1-215ENST00000553680 ABCC9O60706 1549 aa17.16■□□□□ 0.34
KLC1-215ENST00000553680 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
KLC1-215ENST00000553680 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
KLC1-215ENST00000553680 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
KLC1-215ENST00000553680 NACADO15069 1562 aa16.86■□□□□ 0.29
KLC1-215ENST00000553680 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
KLC1-215ENST00000553680 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.27
KLC1-215ENST00000553680 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
KLC1-215ENST00000553680 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
KLC1-215ENST00000553680 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
KLC1-215ENST00000553680 BICRAQ9NZM4 1560 aa16.25■□□□□ 0.19
KLC1-215ENST00000553680 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
KLC1-215ENST00000553680 CECR2Q9BXF3 1484 aa15.85■□□□□ 0.13
KLC1-215ENST00000553680 BAZ1AQ9NRL2 1556 aaPredicted RBP15.83■□□□□ 0.12
KLC1-215ENST00000553680 SMARCA4P51532 1647 aa15.78■□□□□ 0.12
KLC1-215ENST00000553680 EIF4G1Q04637 1599 aaKnown RBP15.76■□□□□ 0.11
KLC1-215ENST00000553680 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
KLC1-215ENST00000553680 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
KLC1-215ENST00000553680 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
KLC1-215ENST00000553680 WIZO95785 1651 aa15.62■□□□□ 0.09
KLC1-215ENST00000553680 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
KLC1-215ENST00000553680 CC2D2AQ9P2K1 1620 aa15.6■□□□□ 0.09
KLC1-215ENST00000553680 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
KLC1-215ENST00000553680 SUPT5HO00267 1087 aaKnown RBP15.57■□□□□ 0.08
KLC1-215ENST00000553680 NCAPD3P42695 1498 aa15.55■□□□□ 0.08
KLC1-215ENST00000553680 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
KLC1-215ENST00000553680 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
KLC1-215ENST00000553680 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.06
KLC1-215ENST00000553680 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
KLC1-215ENST00000553680 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
KLC1-215ENST00000553680 CFTRP13569 1480 aa15.1■□□□□ 0.01
KLC1-215ENST00000553680 CADPSQ9ULU8 1353 aa15.1■□□□□ 0.01
KLC1-215ENST00000553680 LAMC3Q9Y6N6 1575 aa15.08■□□□□ 0
KLC1-215ENST00000553680 PRDM2Q13029 1718 aa15.08■□□□□ 0
KLC1-215ENST00000553680 NESP48681 1621 aa14.99□□□□□ -0.01
KLC1-215ENST00000553680 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
KLC1-215ENST00000553680 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
KLC1-215ENST00000553680 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
KLC1-215ENST00000553680 CEP164Q9UPV0 1460 aa14.83□□□□□ -0.03
KLC1-215ENST00000553680 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
KLC1-215ENST00000553680 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
KLC1-215ENST00000553680 WRNQ14191 1432 aaPredicted RBP eCLIP14.8□□□□□ -0.04
KLC1-215ENST00000553680 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.04
KLC1-215ENST00000553680 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
KLC1-215ENST00000553680 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
KLC1-215ENST00000553680 CUX1P39880 1505 aa14.75□□□□□ -0.05
KLC1-215ENST00000553680 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
KLC1-215ENST00000553680 MRC2Q9UBG0 1479 aa14.74□□□□□ -0.05
KLC1-215ENST00000553680 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
KLC1-215ENST00000553680 URB2Q14146 1524 aaKnown RBP14.73□□□□□ -0.05
KLC1-215ENST00000553680 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
KLC1-215ENST00000553680 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
KLC1-215ENST00000553680 THOC2Q8NI27 1593 aaKnown RBP14.7□□□□□ -0.06
KLC1-215ENST00000553680 WDR62O43379 1518 aa14.69□□□□□ -0.06
KLC1-215ENST00000553680 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
KLC1-215ENST00000553680 POLA1P09884 1462 aaPredicted RBP14.61□□□□□ -0.07
KLC1-215ENST00000553680 SOGA1O94964 1423 aa14.58□□□□□ -0.08
KLC1-215ENST00000553680 CUX2O14529 1486 aa14.56□□□□□ -0.08
KLC1-215ENST00000553680 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
KLC1-215ENST00000553680 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
KLC1-215ENST00000553680 WDR97A6NE52 1622 aa14.54□□□□□ -0.08
KLC1-215ENST00000553680 IFT140Q96RY7 1462 aa14.53□□□□□ -0.08
KLC1-215ENST00000553680 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
KLC1-215ENST00000553680 EEA1Q15075 1411 aa14.49□□□□□ -0.09
KLC1-215ENST00000553680 KIF27Q86VH2 1401 aa14.47□□□□□ -0.09
KLC1-215ENST00000553680 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
KLC1-215ENST00000553680 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
KLC1-215ENST00000553680 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
KLC1-215ENST00000553680 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
KLC1-215ENST00000553680 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
KLC1-215ENST00000553680 ZNF608Q9ULD9 1512 aaPredicted RBP14.4□□□□□ -0.1
KLC1-215ENST00000553680 IGF1RP08069 1367 aa14.38□□□□□ -0.11
KLC1-215ENST00000553680 ERICH3Q5RHP9 1530 aa14.38□□□□□ -0.11
KLC1-215ENST00000553680 PBRM1Q86U86 1689 aa14.38□□□□□ -0.11
KLC1-215ENST00000553680 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
KLC1-215ENST00000553680 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
KLC1-215ENST00000553680 FAM9AQ8IZU1 332 aaPredicted RBP14.35□□□□□ -0.11
KLC1-215ENST00000553680 GRIN2BQ13224 1484 aa14.35□□□□□ -0.11
KLC1-215ENST00000553680 CUL7Q14999 1698 aa14.33□□□□□ -0.11
KLC1-215ENST00000553680 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
KLC1-215ENST00000553680 KIF21BO75037 1637 aa14.3□□□□□ -0.12
KLC1-215ENST00000553680 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
KLC1-215ENST00000553680 MAGI1Q96QZ7 1491 aaPredicted RBP14.28□□□□□ -0.12
KLC1-215ENST00000553680 FHAD1B1AJZ9 1412 aa14.26□□□□□ -0.13
KLC1-215ENST00000553680 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
KLC1-215ENST00000553680 ADAMTS12P58397 1594 aa14.25□□□□□ -0.13
KLC1-215ENST00000553680 SNAPC4Q5SXM2 1469 aa14.25□□□□□ -0.13
KLC1-215ENST00000553680 SYNJ2O15056 1496 aa14.21□□□□□ -0.13
KLC1-215ENST00000553680 GOLGA3Q08378 1498 aa14.21□□□□□ -0.13
KLC1-215ENST00000553680 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
KLC1-215ENST00000553680 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
KLC1-215ENST00000553680 GRIN2AQ12879 1464 aa14.16□□□□□ -0.14
KLC1-215ENST00000553680 TNIKQ9UKE5 1360 aa14.15□□□□□ -0.14
KLC1-215ENST00000553680 CHD1O14646 1710 aa14.15□□□□□ -0.14
KLC1-215ENST00000553680 UBTFP17480 764 aaKnown RBP14.13□□□□□ -0.15
KLC1-215ENST00000553680 CTTNBP2Q8WZ74 1663 aa14.13□□□□□ -0.15
KLC1-215ENST00000553680 NUP160Q12769 1436 aa14.09□□□□□ -0.15
KLC1-215ENST00000553680 FBLN2P98095 1184 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms