RNA–Protein interactions for RNA: ENST00000553638.1

AL355102.4-201, humanhuman

TSL 2 BASIC

Gene AL355102.4, Length 738 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355102.4-201ENST00000553638 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
AL355102.4-201ENST00000553638 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
AL355102.4-201ENST00000553638 NISCHQ9Y2I1 1504 aa18.75■□□□□ 0.59
AL355102.4-201ENST00000553638 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
AL355102.4-201ENST00000553638 PHF23Q9BUL5 403 aaPredicted RBP17.35■□□□□ 0.37
AL355102.4-201ENST00000553638 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
AL355102.4-201ENST00000553638 ABCC9O60706 1549 aa16.86■□□□□ 0.29
AL355102.4-201ENST00000553638 FOXD1Q16676 465 aa16.6■□□□□ 0.25
AL355102.4-201ENST00000553638 POTEDQ86YR6 584 aa16.5■□□□□ 0.23
AL355102.4-201ENST00000553638 RB1CC1Q8TDY2 1594 aa16.01■□□□□ 0.15
AL355102.4-201ENST00000553638 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
AL355102.4-201ENST00000553638 NACADO15069 1562 aa15.9■□□□□ 0.14
AL355102.4-201ENST00000553638 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
AL355102.4-201ENST00000553638 BICRAQ9NZM4 1560 aa15.7■□□□□ 0.1
AL355102.4-201ENST00000553638 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
AL355102.4-201ENST00000553638 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
AL355102.4-201ENST00000553638 MSH5O43196 834 aa15.62■□□□□ 0.09
AL355102.4-201ENST00000553638 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
AL355102.4-201ENST00000553638 ZCCHC6Q5VYS8 1495 aaKnown RBP15.56■□□□□ 0.08
AL355102.4-201ENST00000553638 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
AL355102.4-201ENST00000553638 SCRIBQ14160 1630 aa15.36■□□□□ 0.05
AL355102.4-201ENST00000553638 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
AL355102.4-201ENST00000553638 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
AL355102.4-201ENST00000553638 CC2D2AQ9P2K1 1620 aa15.28■□□□□ 0.04
AL355102.4-201ENST00000553638 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
AL355102.4-201ENST00000553638 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
AL355102.4-201ENST00000553638 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
AL355102.4-201ENST00000553638 ADRA2BP18089 450 aa15□□□□□ -0.01
AL355102.4-201ENST00000553638 PLPPR3Q6T4P5 718 aa14.75□□□□□ -0.05
AL355102.4-201ENST00000553638 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
AL355102.4-201ENST00000553638 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
AL355102.4-201ENST00000553638 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
AL355102.4-201ENST00000553638 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
AL355102.4-201ENST00000553638 SMARCA2P51531 1590 aa14.56□□□□□ -0.08
AL355102.4-201ENST00000553638 DNAJC5Q9H3Z4 198 aa14.56□□□□□ -0.08
AL355102.4-201ENST00000553638 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
AL355102.4-201ENST00000553638 NESP48681 1621 aa14.54□□□□□ -0.08
AL355102.4-201ENST00000553638 CUX2O14529 1486 aa14.53□□□□□ -0.08
AL355102.4-201ENST00000553638 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
AL355102.4-201ENST00000553638 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
AL355102.4-201ENST00000553638 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
AL355102.4-201ENST00000553638 BAZ1BQ9UIG0 1483 aaKnown RBP14.45□□□□□ -0.1
AL355102.4-201ENST00000553638 THOC2Q8NI27 1593 aaKnown RBP14.44□□□□□ -0.1
AL355102.4-201ENST00000553638 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
AL355102.4-201ENST00000553638 LAMC3Q9Y6N6 1575 aa14.36□□□□□ -0.11
AL355102.4-201ENST00000553638 WIZO95785 1651 aa14.33□□□□□ -0.12
AL355102.4-201ENST00000553638 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
AL355102.4-201ENST00000553638 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
AL355102.4-201ENST00000553638 WDR62O43379 1518 aa14.17□□□□□ -0.14
AL355102.4-201ENST00000553638 MRC2Q9UBG0 1479 aa14.14□□□□□ -0.15
AL355102.4-201ENST00000553638 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
AL355102.4-201ENST00000553638 TOP2AP11388 1531 aaKnown RBP14.09□□□□□ -0.15
AL355102.4-201ENST00000553638 CFTRP13569 1480 aa14.07□□□□□ -0.16
AL355102.4-201ENST00000553638 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
AL355102.4-201ENST00000553638 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
AL355102.4-201ENST00000553638 PRDM2Q13029 1718 aa14.02□□□□□ -0.16
AL355102.4-201ENST00000553638 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
AL355102.4-201ENST00000553638 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
AL355102.4-201ENST00000553638 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
AL355102.4-201ENST00000553638 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
AL355102.4-201ENST00000553638 DMRT2Q9Y5R5 561 aa13.87□□□□□ -0.19
AL355102.4-201ENST00000553638 ZNF608Q9ULD9 1512 aaPredicted RBP13.86□□□□□ -0.19
AL355102.4-201ENST00000553638 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
AL355102.4-201ENST00000553638 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
AL355102.4-201ENST00000553638 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
AL355102.4-201ENST00000553638 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
AL355102.4-201ENST00000553638 TARBP1Q13395 1621 aaKnown RBP13.78□□□□□ -0.2
AL355102.4-201ENST00000553638 RIMBP3CA6NJZ7 1639 aa13.77□□□□□ -0.21
AL355102.4-201ENST00000553638 RIMBP3BA6NNM3 1639 aa13.77□□□□□ -0.21
AL355102.4-201ENST00000553638 RIMBP3Q9UFD9 1639 aa13.77□□□□□ -0.21
AL355102.4-201ENST00000553638 DNMBPQ6XZF7 1577 aa13.76□□□□□ -0.21
AL355102.4-201ENST00000553638 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
AL355102.4-201ENST00000553638 CHD1O14646 1710 aa13.72□□□□□ -0.21
AL355102.4-201ENST00000553638 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
AL355102.4-201ENST00000553638 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
AL355102.4-201ENST00000553638 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
AL355102.4-201ENST00000553638 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
AL355102.4-201ENST00000553638 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
AL355102.4-201ENST00000553638 CUX1P39880 1505 aa13.61□□□□□ -0.23
AL355102.4-201ENST00000553638 WDR97A6NE52 1622 aa13.61□□□□□ -0.23
AL355102.4-201ENST00000553638 FGD5Q6ZNL6 1462 aa13.58□□□□□ -0.24
AL355102.4-201ENST00000553638 ARAP1Q96P48 1450 aa13.57□□□□□ -0.24
AL355102.4-201ENST00000553638 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
AL355102.4-201ENST00000553638 TDRD9Q8NDG6 1382 aaKnown RBP13.54□□□□□ -0.24
AL355102.4-201ENST00000553638 SOGA1O94964 1423 aa13.54□□□□□ -0.24
AL355102.4-201ENST00000553638 SNAPC4Q5SXM2 1469 aa13.53□□□□□ -0.24
AL355102.4-201ENST00000553638 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
AL355102.4-201ENST00000553638 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
AL355102.4-201ENST00000553638 SCAF1Q9H7N4 1312 aaKnown RBP13.47□□□□□ -0.25
AL355102.4-201ENST00000553638 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
AL355102.4-201ENST00000553638 CYB5RLQ6IPT4 315 aa13.46□□□□□ -0.25
AL355102.4-201ENST00000553638 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
AL355102.4-201ENST00000553638 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
AL355102.4-201ENST00000553638 FBLN2P98095 1184 aa13.43□□□□□ -0.26
AL355102.4-201ENST00000553638 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
AL355102.4-201ENST00000553638 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
AL355102.4-201ENST00000553638 ABCA10Q8WWZ4 1543 aa13.41□□□□□ -0.26
AL355102.4-201ENST00000553638 BIVM-ERCC5R4GMW8 1640 aa13.39□□□□□ -0.27
AL355102.4-201ENST00000553638 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
AL355102.4-201ENST00000553638 ERCC6L2Q5T890 1561 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms