RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 NISCHQ9Y2I1 1504 aa28.65■■■□□ 2.18
CCNK-202ENST00000553636 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
CCNK-202ENST00000553636 ABCC9O60706 1549 aa25.3■■□□□ 1.64
CCNK-202ENST00000553636 RB1CC1Q8TDY2 1594 aa24.21■■□□□ 1.47
CCNK-202ENST00000553636 NACADO15069 1562 aa24.11■■□□□ 1.45
CCNK-202ENST00000553636 DCAF8L2P0C7V8 631 aa24.04■■□□□ 1.44
CCNK-202ENST00000553636 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
CCNK-202ENST00000553636 MYO15BQ96JP2 1530 aa23.84■■□□□ 1.41
CCNK-202ENST00000553636 ZCCHC6Q5VYS8 1495 aaKnown RBP23.83■■□□□ 1.41
CCNK-202ENST00000553636 UNC13AQ9UPW8 1703 aa23.73■■□□□ 1.39
CCNK-202ENST00000553636 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
CCNK-202ENST00000553636 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
CCNK-202ENST00000553636 BICRAQ9NZM4 1560 aa23.49■■□□□ 1.35
CCNK-202ENST00000553636 SCRIBQ14160 1630 aa23.39■■□□□ 1.33
CCNK-202ENST00000553636 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
CCNK-202ENST00000553636 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
CCNK-202ENST00000553636 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
CCNK-202ENST00000553636 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.26
CCNK-202ENST00000553636 CC2D2AQ9P2K1 1620 aa22.87■■□□□ 1.25
CCNK-202ENST00000553636 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
CCNK-202ENST00000553636 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
CCNK-202ENST00000553636 BAZ1AQ9NRL2 1556 aaPredicted RBP22.23■■□□□ 1.15
CCNK-202ENST00000553636 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
CCNK-202ENST00000553636 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
CCNK-202ENST00000553636 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
CCNK-202ENST00000553636 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
CCNK-202ENST00000553636 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
CCNK-202ENST00000553636 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
CCNK-202ENST00000553636 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
CCNK-202ENST00000553636 WIZO95785 1651 aa21.88■■□□□ 1.09
CCNK-202ENST00000553636 NESP48681 1621 aa21.82■■□□□ 1.08
CCNK-202ENST00000553636 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
CCNK-202ENST00000553636 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
CCNK-202ENST00000553636 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
CCNK-202ENST00000553636 CUX2O14529 1486 aa21.64■■□□□ 1.05
CCNK-202ENST00000553636 TOP2AP11388 1531 aaKnown RBP21.61■■□□□ 1.05
CCNK-202ENST00000553636 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
CCNK-202ENST00000553636 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
CCNK-202ENST00000553636 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
CCNK-202ENST00000553636 PDS5BQ9NTI5 1447 aa21.54■■□□□ 1.04
CCNK-202ENST00000553636 CFTRP13569 1480 aa21.39■■□□□ 1.02
CCNK-202ENST00000553636 MRC2Q9UBG0 1479 aa21.37■■□□□ 1.01
CCNK-202ENST00000553636 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
CCNK-202ENST00000553636 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
CCNK-202ENST00000553636 CCDC88BA6NC98 1476 aa21.33■■□□□ 1.01
CCNK-202ENST00000553636 WDR62O43379 1518 aa21.31■■□□□ 1
CCNK-202ENST00000553636 PRDM2Q13029 1718 aa21.31■■□□□ 1
CCNK-202ENST00000553636 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
CCNK-202ENST00000553636 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
CCNK-202ENST00000553636 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
CCNK-202ENST00000553636 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
CCNK-202ENST00000553636 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
CCNK-202ENST00000553636 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
CCNK-202ENST00000553636 IFT140Q96RY7 1462 aa20.89■□□□□ 0.94
CCNK-202ENST00000553636 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
CCNK-202ENST00000553636 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
CCNK-202ENST00000553636 TARBP1Q13395 1621 aaKnown RBP20.79■□□□□ 0.92
CCNK-202ENST00000553636 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
CCNK-202ENST00000553636 CUX1P39880 1505 aa20.75■□□□□ 0.91
CCNK-202ENST00000553636 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
CCNK-202ENST00000553636 RAD54L2Q9Y4B4 1467 aa20.71■□□□□ 0.91
CCNK-202ENST00000553636 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.93e-6■■■■□ 24.7
CCNK-202ENST00000553636 SOGA1O94964 1423 aa20.68■□□□□ 0.9
CCNK-202ENST00000553636 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
CCNK-202ENST00000553636 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
CCNK-202ENST00000553636 CHD1O14646 1710 aa20.6■□□□□ 0.89
CCNK-202ENST00000553636 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
CCNK-202ENST00000553636 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
CCNK-202ENST00000553636 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
CCNK-202ENST00000553636 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
CCNK-202ENST00000553636 TOP2BQ02880 1626 aa20.5■□□□□ 0.87
CCNK-202ENST00000553636 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
CCNK-202ENST00000553636 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
CCNK-202ENST00000553636 FBLN2P98095 1184 aa20.49■□□□□ 0.87
CCNK-202ENST00000553636 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
CCNK-202ENST00000553636 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
CCNK-202ENST00000553636 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
CCNK-202ENST00000553636 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
CCNK-202ENST00000553636 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
CCNK-202ENST00000553636 MAGI1Q96QZ7 1491 aaPredicted RBP20.45■□□□□ 0.86
CCNK-202ENST00000553636 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.86
CCNK-202ENST00000553636 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.86
CCNK-202ENST00000553636 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.86
CCNK-202ENST00000553636 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
CCNK-202ENST00000553636 ARHGEF11O15085 1522 aa20.4■□□□□ 0.86
CCNK-202ENST00000553636 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
CCNK-202ENST00000553636 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
CCNK-202ENST00000553636 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
CCNK-202ENST00000553636 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
CCNK-202ENST00000553636 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
CCNK-202ENST00000553636 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
CCNK-202ENST00000553636 GRIN2AQ12879 1464 aa20.23■□□□□ 0.83
CCNK-202ENST00000553636 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
CCNK-202ENST00000553636 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
CCNK-202ENST00000553636 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
CCNK-202ENST00000553636 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
CCNK-202ENST00000553636 NUP160Q12769 1436 aa20.12■□□□□ 0.81
CCNK-202ENST00000553636 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
CCNK-202ENST00000553636 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
CCNK-202ENST00000553636 CUL7Q14999 1698 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms