RNA–Protein interactions for RNA: ENST00000553539.1

EIF2B2-203, Transcript of eukaryotic translation initiation factor 2B subunit beta, humanhuman

TSL 2

Gene EIF2B2, Length 1,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF2B2-203ENST00000553539 NISCHQ9Y2I1 1504 aa31.33■■■□□ 2.61
EIF2B2-203ENST00000553539 ABCC9O60706 1549 aa28.14■■■□□ 2.1
EIF2B2-203ENST00000553539 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
EIF2B2-203ENST00000553539 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
EIF2B2-203ENST00000553539 NACADO15069 1562 aa26.63■■□□□ 1.85
EIF2B2-203ENST00000553539 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
EIF2B2-203ENST00000553539 DNAJC5BQ9UF47 199 aa26.46■■□□□ 1.83
EIF2B2-203ENST00000553539 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
EIF2B2-203ENST00000553539 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
EIF2B2-203ENST00000553539 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
EIF2B2-203ENST00000553539 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
EIF2B2-203ENST00000553539 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
EIF2B2-203ENST00000553539 DCAF1Q9Y4B6 1507 aa25.9■■□□□ 1.74
EIF2B2-203ENST00000553539 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
EIF2B2-203ENST00000553539 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
EIF2B2-203ENST00000553539 CC2D2AQ9P2K1 1620 aa25.41■■□□□ 1.66
EIF2B2-203ENST00000553539 CECR2Q9BXF3 1484 aa25.38■■□□□ 1.65
EIF2B2-203ENST00000553539 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
EIF2B2-203ENST00000553539 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
EIF2B2-203ENST00000553539 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
EIF2B2-203ENST00000553539 SMARCA2P51531 1590 aa24.43■■□□□ 1.5
EIF2B2-203ENST00000553539 SMARCA4P51532 1647 aa24.41■■□□□ 1.5
EIF2B2-203ENST00000553539 DNAJC5Q9H3Z4 198 aa24.4■■□□□ 1.5
EIF2B2-203ENST00000553539 HMGXB3Q12766 1538 aa24.36■■□□□ 1.49
EIF2B2-203ENST00000553539 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.49
EIF2B2-203ENST00000553539 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
EIF2B2-203ENST00000553539 CUX2O14529 1486 aa24.32■■□□□ 1.48
EIF2B2-203ENST00000553539 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
EIF2B2-203ENST00000553539 PEG3Q9GZU2 1588 aa24.21■■□□□ 1.47
EIF2B2-203ENST00000553539 NESP48681 1621 aa24.13■■□□□ 1.45
EIF2B2-203ENST00000553539 MROH2BQ7Z745 1585 aa24.11■■□□□ 1.45
EIF2B2-203ENST00000553539 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
EIF2B2-203ENST00000553539 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
EIF2B2-203ENST00000553539 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
EIF2B2-203ENST00000553539 CADPSQ9ULU8 1353 aa23.86■■□□□ 1.41
EIF2B2-203ENST00000553539 KIF21AQ7Z4S6 1674 aa23.81■■□□□ 1.4
EIF2B2-203ENST00000553539 WIZO95785 1651 aa23.79■■□□□ 1.4
EIF2B2-203ENST00000553539 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
EIF2B2-203ENST00000553539 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
EIF2B2-203ENST00000553539 WDR62O43379 1518 aa23.59■■□□□ 1.37
EIF2B2-203ENST00000553539 CEP164Q9UPV0 1460 aa23.57■■□□□ 1.36
EIF2B2-203ENST00000553539 CFTRP13569 1480 aa23.56■■□□□ 1.36
EIF2B2-203ENST00000553539 FANCD2Q9BXW9 1451 aa23.55■■□□□ 1.36
EIF2B2-203ENST00000553539 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
EIF2B2-203ENST00000553539 URB2Q14146 1524 aaKnown RBP23.32■■□□□ 1.32
EIF2B2-203ENST00000553539 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
EIF2B2-203ENST00000553539 CCDC88BA6NC98 1476 aa23.29■■□□□ 1.32
EIF2B2-203ENST00000553539 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
EIF2B2-203ENST00000553539 PRDM2Q13029 1718 aa23.25■■□□□ 1.31
EIF2B2-203ENST00000553539 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
EIF2B2-203ENST00000553539 ABCC8Q09428 1581 aa23.13■■□□□ 1.29
EIF2B2-203ENST00000553539 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
EIF2B2-203ENST00000553539 TOPBP1Q92547 1522 aa23.08■■□□□ 1.29
EIF2B2-203ENST00000553539 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
EIF2B2-203ENST00000553539 DNMBPQ6XZF7 1577 aa22.99■■□□□ 1.27
EIF2B2-203ENST00000553539 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
EIF2B2-203ENST00000553539 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
EIF2B2-203ENST00000553539 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
EIF2B2-203ENST00000553539 RIMBP3CA6NJZ7 1639 aa22.84■■□□□ 1.25
EIF2B2-203ENST00000553539 RIMBP3BA6NNM3 1639 aa22.84■■□□□ 1.25
EIF2B2-203ENST00000553539 RIMBP3Q9UFD9 1639 aa22.84■■□□□ 1.25
EIF2B2-203ENST00000553539 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
EIF2B2-203ENST00000553539 SOGA1O94964 1423 aa22.8■■□□□ 1.24
EIF2B2-203ENST00000553539 ARHGEF11O15085 1522 aa22.78■■□□□ 1.24
EIF2B2-203ENST00000553539 FBLN2P98095 1184 aa22.78■■□□□ 1.24
EIF2B2-203ENST00000553539 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
EIF2B2-203ENST00000553539 TDRD9Q8NDG6 1382 aaKnown RBP22.74■■□□□ 1.23
EIF2B2-203ENST00000553539 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
EIF2B2-203ENST00000553539 CHD1O14646 1710 aa22.71■■□□□ 1.23
EIF2B2-203ENST00000553539 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
EIF2B2-203ENST00000553539 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
EIF2B2-203ENST00000553539 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
EIF2B2-203ENST00000553539 CUX1P39880 1505 aa22.64■■□□□ 1.21
EIF2B2-203ENST00000553539 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
EIF2B2-203ENST00000553539 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
EIF2B2-203ENST00000553539 SNAPC4Q5SXM2 1469 aa22.59■■□□□ 1.21
EIF2B2-203ENST00000553539 GRIN2BQ13224 1484 aa22.58■■□□□ 1.2
EIF2B2-203ENST00000553539 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.2
EIF2B2-203ENST00000553539 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
EIF2B2-203ENST00000553539 SYNJ2O15056 1496 aa22.51■■□□□ 1.19
EIF2B2-203ENST00000553539 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
EIF2B2-203ENST00000553539 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
EIF2B2-203ENST00000553539 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
EIF2B2-203ENST00000553539 CLASP1Q7Z460 1538 aa22.47■■□□□ 1.19
EIF2B2-203ENST00000553539 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
EIF2B2-203ENST00000553539 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
EIF2B2-203ENST00000553539 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
EIF2B2-203ENST00000553539 ABCA5Q8WWZ7 1642 aa22.37■■□□□ 1.17
EIF2B2-203ENST00000553539 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
EIF2B2-203ENST00000553539 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
EIF2B2-203ENST00000553539 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
EIF2B2-203ENST00000553539 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
EIF2B2-203ENST00000553539 NUP160Q12769 1436 aa22.2■■□□□ 1.14
EIF2B2-203ENST00000553539 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
EIF2B2-203ENST00000553539 ERICH3Q5RHP9 1530 aa22.18■■□□□ 1.14
EIF2B2-203ENST00000553539 CEP170Q5SW79 1584 aa22.13■■□□□ 1.13
EIF2B2-203ENST00000553539 ERCC6L2Q5T890 1561 aa22.08■■□□□ 1.13
EIF2B2-203ENST00000553539 SHROOM2Q13796 1616 aa22.07■■□□□ 1.12
EIF2B2-203ENST00000553539 JPH4Q96JJ6 628 aa22.05■■□□□ 1.12
EIF2B2-203ENST00000553539 PRG4Q92954 1404 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms