RNA–Protein interactions for RNA: ENST00000553518.1

VASH1-202, Transcript of vasohibin 1, humanhuman

TSL 3

Gene VASH1, Length 484 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASH1-202ENST00000553518 NISCHQ9Y2I1 1504 aa18.5■□□□□ 0.55
VASH1-202ENST00000553518 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
VASH1-202ENST00000553518 ABCC9O60706 1549 aa16.34■□□□□ 0.21
VASH1-202ENST00000553518 RB1CC1Q8TDY2 1594 aa15.64■□□□□ 0.09
VASH1-202ENST00000553518 NACADO15069 1562 aa15.53■□□□□ 0.08
VASH1-202ENST00000553518 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.08
VASH1-202ENST00000553518 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.05
VASH1-202ENST00000553518 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
VASH1-202ENST00000553518 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
VASH1-202ENST00000553518 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
VASH1-202ENST00000553518 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.03
VASH1-202ENST00000553518 PABPN1Q86U42 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
VASH1-202ENST00000553518 BICRAQ9NZM4 1560 aa15.13■□□□□ 0.01
VASH1-202ENST00000553518 SHROOM4Q9ULL8 1493 aa15.07■□□□□ 0
VASH1-202ENST00000553518 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
VASH1-202ENST00000553518 CC2D2AQ9P2K1 1620 aa14.82□□□□□ -0.04
VASH1-202ENST00000553518 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
VASH1-202ENST00000553518 CECR2Q9BXF3 1484 aa14.77□□□□□ -0.04
VASH1-202ENST00000553518 NCAPD3P42695 1498 aa14.3□□□□□ -0.12
VASH1-202ENST00000553518 MROH2BQ7Z745 1585 aa14.29□□□□□ -0.12
VASH1-202ENST00000553518 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
VASH1-202ENST00000553518 BAZ1AQ9NRL2 1556 aaPredicted RBP14.28□□□□□ -0.12
VASH1-202ENST00000553518 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
VASH1-202ENST00000553518 SUPT5HO00267 1087 aaKnown RBP14.24□□□□□ -0.13
VASH1-202ENST00000553518 DNAJC5Q9H3Z4 198 aa14.24□□□□□ -0.13
VASH1-202ENST00000553518 CUX2O14529 1486 aa14.24□□□□□ -0.13
VASH1-202ENST00000553518 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
VASH1-202ENST00000553518 HMGXB3Q12766 1538 aa14.22□□□□□ -0.13
VASH1-202ENST00000553518 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
VASH1-202ENST00000553518 WIZO95785 1651 aa14.17□□□□□ -0.14
VASH1-202ENST00000553518 ERCC6Q03468 1493 aa14.16□□□□□ -0.14
VASH1-202ENST00000553518 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
VASH1-202ENST00000553518 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
VASH1-202ENST00000553518 LAMC3Q9Y6N6 1575 aa14.03□□□□□ -0.16
VASH1-202ENST00000553518 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
VASH1-202ENST00000553518 NESP48681 1621 aa14□□□□□ -0.17
VASH1-202ENST00000553518 THOC2Q8NI27 1593 aaKnown RBP13.97□□□□□ -0.17
VASH1-202ENST00000553518 PDS5BQ9NTI5 1447 aa13.91□□□□□ -0.18
VASH1-202ENST00000553518 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
VASH1-202ENST00000553518 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
VASH1-202ENST00000553518 CADPSQ9ULU8 1353 aa13.83□□□□□ -0.2
VASH1-202ENST00000553518 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
VASH1-202ENST00000553518 WDR62O43379 1518 aa13.77□□□□□ -0.21
VASH1-202ENST00000553518 CEP164Q9UPV0 1460 aa13.71□□□□□ -0.21
VASH1-202ENST00000553518 CFTRP13569 1480 aa13.67□□□□□ -0.22
VASH1-202ENST00000553518 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
VASH1-202ENST00000553518 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
VASH1-202ENST00000553518 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
VASH1-202ENST00000553518 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
VASH1-202ENST00000553518 ABCC8Q09428 1581 aa13.52□□□□□ -0.25
VASH1-202ENST00000553518 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
VASH1-202ENST00000553518 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
VASH1-202ENST00000553518 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
VASH1-202ENST00000553518 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
VASH1-202ENST00000553518 WRNQ14191 1432 aaPredicted RBP eCLIP13.42□□□□□ -0.26
VASH1-202ENST00000553518 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
VASH1-202ENST00000553518 BIVM-ERCC5R4GMW8 1640 aa13.39□□□□□ -0.27
VASH1-202ENST00000553518 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
VASH1-202ENST00000553518 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
VASH1-202ENST00000553518 CUX1P39880 1505 aa13.38□□□□□ -0.27
VASH1-202ENST00000553518 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
VASH1-202ENST00000553518 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
VASH1-202ENST00000553518 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
VASH1-202ENST00000553518 ZNF608Q9ULD9 1512 aaPredicted RBP13.35□□□□□ -0.27
VASH1-202ENST00000553518 EIF4G3O43432 1585 aaKnown RBP13.35□□□□□ -0.27
VASH1-202ENST00000553518 TARBP1Q13395 1621 aaKnown RBP13.31□□□□□ -0.28
VASH1-202ENST00000553518 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
VASH1-202ENST00000553518 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
VASH1-202ENST00000553518 CHD1O14646 1710 aa13.28□□□□□ -0.28
VASH1-202ENST00000553518 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
VASH1-202ENST00000553518 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
VASH1-202ENST00000553518 AQRO60306 1485 aaKnown RBP eCLIP13.22□□□□□ -0.29
VASH1-202ENST00000553518 SOGA1O94964 1423 aa13.22□□□□□ -0.29
VASH1-202ENST00000553518 RUSC2Q8N2Y8 1516 aa13.2□□□□□ -0.3
VASH1-202ENST00000553518 EEA1Q15075 1411 aa13.16□□□□□ -0.3
VASH1-202ENST00000553518 MAGI1Q96QZ7 1491 aaPredicted RBP13.15□□□□□ -0.3
VASH1-202ENST00000553518 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
VASH1-202ENST00000553518 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
VASH1-202ENST00000553518 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
VASH1-202ENST00000553518 CYB5RLQ6IPT4 315 aa13.13□□□□□ -0.31
VASH1-202ENST00000553518 FBLN2P98095 1184 aa13.12□□□□□ -0.31
VASH1-202ENST00000553518 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
VASH1-202ENST00000553518 ABCA10Q8WWZ4 1543 aa13.12□□□□□ -0.31
VASH1-202ENST00000553518 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
VASH1-202ENST00000553518 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
VASH1-202ENST00000553518 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
VASH1-202ENST00000553518 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
VASH1-202ENST00000553518 SYNJ2O15056 1496 aa13.09□□□□□ -0.31
VASH1-202ENST00000553518 KIF27Q86VH2 1401 aa13.08□□□□□ -0.32
VASH1-202ENST00000553518 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
VASH1-202ENST00000553518 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
VASH1-202ENST00000553518 CHMP7Q8WUX9 453 aaPredicted RBP13.06□□□□□ -0.32
VASH1-202ENST00000553518 ABCA5Q8WWZ7 1642 aa13.06□□□□□ -0.32
VASH1-202ENST00000553518 KIF21BO75037 1637 aa13.04□□□□□ -0.32
VASH1-202ENST00000553518 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
VASH1-202ENST00000553518 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
VASH1-202ENST00000553518 IGF1RP08069 1367 aa13.01□□□□□ -0.33
VASH1-202ENST00000553518 PRXQ9BXM0 1461 aa13.01□□□□□ -0.33
VASH1-202ENST00000553518 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
VASH1-202ENST00000553518 GOLGA3Q08378 1498 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms