RNA–Protein interactions for RNA: ENST00000553463.1

LINC01588-206, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 3

Gene LINC01588, Length 357 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-206ENST00000553463 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
LINC01588-206ENST00000553463 ABCC9O60706 1549 aa16.21■□□□□ 0.19
LINC01588-206ENST00000553463 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
LINC01588-206ENST00000553463 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
LINC01588-206ENST00000553463 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
LINC01588-206ENST00000553463 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
LINC01588-206ENST00000553463 NACADO15069 1562 aa14.9□□□□□ -0.02
LINC01588-206ENST00000553463 DNAJC5Q9H3Z4 198 aa14.89□□□□□ -0.03
LINC01588-206ENST00000553463 DCAF8L2P0C7V8 631 aa14.82□□□□□ -0.04
LINC01588-206ENST00000553463 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
LINC01588-206ENST00000553463 BICRAQ9NZM4 1560 aa14.76□□□□□ -0.05
LINC01588-206ENST00000553463 CECR2Q9BXF3 1484 aa14.65□□□□□ -0.06
LINC01588-206ENST00000553463 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
LINC01588-206ENST00000553463 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
LINC01588-206ENST00000553463 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
LINC01588-206ENST00000553463 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
LINC01588-206ENST00000553463 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
LINC01588-206ENST00000553463 CUX2O14529 1486 aa14.17□□□□□ -0.14
LINC01588-206ENST00000553463 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
LINC01588-206ENST00000553463 ZCCHC6Q5VYS8 1495 aaKnown RBP14.08□□□□□ -0.16
LINC01588-206ENST00000553463 ERCC6Q03468 1493 aa14□□□□□ -0.17
LINC01588-206ENST00000553463 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
LINC01588-206ENST00000553463 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
LINC01588-206ENST00000553463 NESP48681 1621 aa13.78□□□□□ -0.2
LINC01588-206ENST00000553463 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
LINC01588-206ENST00000553463 ATAD2BQ9ULI0 1458 aa13.68□□□□□ -0.22
LINC01588-206ENST00000553463 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
LINC01588-206ENST00000553463 SMARCA2P51531 1590 aa13.58□□□□□ -0.24
LINC01588-206ENST00000553463 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
LINC01588-206ENST00000553463 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
LINC01588-206ENST00000553463 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
LINC01588-206ENST00000553463 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
LINC01588-206ENST00000553463 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
LINC01588-206ENST00000553463 BAZ1BQ9UIG0 1483 aaKnown RBP13.48□□□□□ -0.25
LINC01588-206ENST00000553463 BAZ1AQ9NRL2 1556 aaPredicted RBP13.45□□□□□ -0.26
LINC01588-206ENST00000553463 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
LINC01588-206ENST00000553463 WDR62O43379 1518 aa13.39□□□□□ -0.27
LINC01588-206ENST00000553463 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
LINC01588-206ENST00000553463 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
LINC01588-206ENST00000553463 RIMBP3CA6NJZ7 1639 aa13.32□□□□□ -0.28
LINC01588-206ENST00000553463 RIMBP3BA6NNM3 1639 aa13.32□□□□□ -0.28
LINC01588-206ENST00000553463 RIMBP3Q9UFD9 1639 aa13.32□□□□□ -0.28
LINC01588-206ENST00000553463 AEBP2Q6ZN18 517 aaPredicted RBP13.27□□□□□ -0.29
LINC01588-206ENST00000553463 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
LINC01588-206ENST00000553463 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
LINC01588-206ENST00000553463 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
LINC01588-206ENST00000553463 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
LINC01588-206ENST00000553463 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
LINC01588-206ENST00000553463 FANCD2Q9BXW9 1451 aa13.19□□□□□ -0.3
LINC01588-206ENST00000553463 URB2Q14146 1524 aaKnown RBP13.13□□□□□ -0.31
LINC01588-206ENST00000553463 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
LINC01588-206ENST00000553463 CFTRP13569 1480 aa13.08□□□□□ -0.32
LINC01588-206ENST00000553463 ARAP1Q96P48 1450 aa13.07□□□□□ -0.32
LINC01588-206ENST00000553463 ZNF608Q9ULD9 1512 aaPredicted RBP13.07□□□□□ -0.32
LINC01588-206ENST00000553463 WIZO95785 1651 aa13.04□□□□□ -0.32
LINC01588-206ENST00000553463 IFT140Q96RY7 1462 aa13□□□□□ -0.33
LINC01588-206ENST00000553463 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
LINC01588-206ENST00000553463 FBLN2P98095 1184 aa12.94□□□□□ -0.34
LINC01588-206ENST00000553463 CHD1O14646 1710 aa12.92□□□□□ -0.34
LINC01588-206ENST00000553463 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.34
LINC01588-206ENST00000553463 AQRO60306 1485 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC01588-206ENST00000553463 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
LINC01588-206ENST00000553463 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
LINC01588-206ENST00000553463 ILDR1Q86SU0 546 aaPredicted RBP12.81□□□□□ -0.36
LINC01588-206ENST00000553463 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
LINC01588-206ENST00000553463 ABCC8Q09428 1581 aa12.8□□□□□ -0.36
LINC01588-206ENST00000553463 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
LINC01588-206ENST00000553463 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
LINC01588-206ENST00000553463 DNMBPQ6XZF7 1577 aa12.75□□□□□ -0.37
LINC01588-206ENST00000553463 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
LINC01588-206ENST00000553463 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
LINC01588-206ENST00000553463 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
LINC01588-206ENST00000553463 POLA1P09884 1462 aaPredicted RBP12.71□□□□□ -0.38
LINC01588-206ENST00000553463 GAPVD1Q14C86 1478 aa12.71□□□□□ -0.38
LINC01588-206ENST00000553463 SNAPC4Q5SXM2 1469 aa12.71□□□□□ -0.38
LINC01588-206ENST00000553463 RAD54L2Q9Y4B4 1467 aa12.71□□□□□ -0.38
LINC01588-206ENST00000553463 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
LINC01588-206ENST00000553463 SOGA1O94964 1423 aa12.67□□□□□ -0.38
LINC01588-206ENST00000553463 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
LINC01588-206ENST00000553463 MAGI1Q96QZ7 1491 aaPredicted RBP12.63□□□□□ -0.39
LINC01588-206ENST00000553463 SYNJ2O15056 1496 aa12.61□□□□□ -0.39
LINC01588-206ENST00000553463 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
LINC01588-206ENST00000553463 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
LINC01588-206ENST00000553463 ERCC6L2Q5T890 1561 aa12.57□□□□□ -0.4
LINC01588-206ENST00000553463 KIF13AQ9H1H9 1805 aa12.56□□□□□ -0.4
LINC01588-206ENST00000553463 FGD5Q6ZNL6 1462 aa12.54□□□□□ -0.4
LINC01588-206ENST00000553463 FAM69CQ0P6D2 419 aa12.5□□□□□ -0.41
LINC01588-206ENST00000553463 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
LINC01588-206ENST00000553463 PBRM1Q86U86 1689 aa12.46□□□□□ -0.41
LINC01588-206ENST00000553463 CUX1P39880 1505 aa12.46□□□□□ -0.42
LINC01588-206ENST00000553463 ABCC10Q5T3U5 1492 aa12.44□□□□□ -0.42
LINC01588-206ENST00000553463 GRIN2AQ12879 1464 aa12.43□□□□□ -0.42
LINC01588-206ENST00000553463 NUP160Q12769 1436 aa12.42□□□□□ -0.42
LINC01588-206ENST00000553463 KDM6BO15054 1643 aa12.4□□□□□ -0.42
LINC01588-206ENST00000553463 SHROOM2Q13796 1616 aa12.4□□□□□ -0.42
LINC01588-206ENST00000553463 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC01588-206ENST00000553463 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
LINC01588-206ENST00000553463 ABCA10Q8WWZ4 1543 aa12.37□□□□□ -0.43
LINC01588-206ENST00000553463 DIP2BQ9P265 1576 aa12.36□□□□□ -0.43
LINC01588-206ENST00000553463 PRG4Q92954 1404 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms