RNA–Protein interactions for RNA: ENST00000553439.5

NGDN-204, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 2,763 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-204ENST00000553439 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
NGDN-204ENST00000553439 ABCC9O60706 1549 aa13.55□□□□□ -0.24
NGDN-204ENST00000553439 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
NGDN-204ENST00000553439 CCDC180Q9P1Z9 1646 aa13.39□□□□□ -0.27
NGDN-204ENST00000553439 AEBP2Q6ZN18 517 aaPredicted RBP13.38□□□□□ -0.27
NGDN-204ENST00000553439 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
NGDN-204ENST00000553439 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
NGDN-204ENST00000553439 RB1CC1Q8TDY2 1594 aa12.95□□□□□ -0.34
NGDN-204ENST00000553439 NACADO15069 1562 aa12.74□□□□□ -0.37
NGDN-204ENST00000553439 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
NGDN-204ENST00000553439 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
NGDN-204ENST00000553439 MYO15BQ96JP2 1530 aa12.5□□□□□ -0.41
NGDN-204ENST00000553439 BICRAQ9NZM4 1560 aa12.5□□□□□ -0.41
NGDN-204ENST00000553439 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
NGDN-204ENST00000553439 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
NGDN-204ENST00000553439 CUX2O14529 1486 aa12.37□□□□□ -0.43
NGDN-204ENST00000553439 PABPN1Q86U42 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
NGDN-204ENST00000553439 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
NGDN-204ENST00000553439 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
NGDN-204ENST00000553439 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
NGDN-204ENST00000553439 ERCC6Q03468 1493 aa11.85□□□□□ -0.51
NGDN-204ENST00000553439 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
NGDN-204ENST00000553439 SCRIBQ14160 1630 aa11.75□□□□□ -0.53
NGDN-204ENST00000553439 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
NGDN-204ENST00000553439 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
NGDN-204ENST00000553439 NCAPD3P42695 1498 aa11.69□□□□□ -0.54
NGDN-204ENST00000553439 ZCCHC6Q5VYS8 1495 aaKnown RBP11.69□□□□□ -0.54
NGDN-204ENST00000553439 HMGXB3Q12766 1538 aa11.62□□□□□ -0.55
NGDN-204ENST00000553439 LAMC3Q9Y6N6 1575 aa11.6□□□□□ -0.55
NGDN-204ENST00000553439 BAZ1AQ9NRL2 1556 aaPredicted RBP11.55□□□□□ -0.56
NGDN-204ENST00000553439 SMARCA2P51531 1590 aa11.51□□□□□ -0.57
NGDN-204ENST00000553439 WDR62O43379 1518 aa11.45□□□□□ -0.58
NGDN-204ENST00000553439 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
NGDN-204ENST00000553439 PDS5BQ9NTI5 1447 aa11.45□□□□□ -0.58
NGDN-204ENST00000553439 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
NGDN-204ENST00000553439 RIMBP3CA6NJZ7 1639 aa11.44□□□□□ -0.58
NGDN-204ENST00000553439 RIMBP3BA6NNM3 1639 aa11.44□□□□□ -0.58
NGDN-204ENST00000553439 RIMBP3Q9UFD9 1639 aa11.44□□□□□ -0.58
NGDN-204ENST00000553439 NESP48681 1621 aa11.42□□□□□ -0.58
NGDN-204ENST00000553439 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
NGDN-204ENST00000553439 MRC2Q9UBG0 1479 aa11.39□□□□□ -0.59
NGDN-204ENST00000553439 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
NGDN-204ENST00000553439 SMARCA4P51532 1647 aa11.29□□□□□ -0.6
NGDN-204ENST00000553439 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
NGDN-204ENST00000553439 BAZ1BQ9UIG0 1483 aaKnown RBP11.26□□□□□ -0.61
NGDN-204ENST00000553439 PLPPR3Q6T4P5 718 aa11.2□□□□□ -0.62
NGDN-204ENST00000553439 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
NGDN-204ENST00000553439 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
NGDN-204ENST00000553439 CEP164Q9UPV0 1460 aa11.15□□□□□ -0.62
NGDN-204ENST00000553439 ARAP1Q96P48 1450 aa11.1□□□□□ -0.63
NGDN-204ENST00000553439 EHMT2Q96KQ7 1210 aa11.07□□□□□ -0.64
NGDN-204ENST00000553439 TRHP20396 242 aaPredicted RBP11.06□□□□□ -0.64
NGDN-204ENST00000553439 IFT140Q96RY7 1462 aa11.03□□□□□ -0.64
NGDN-204ENST00000553439 FANCD2Q9BXW9 1451 aa11.03□□□□□ -0.64
NGDN-204ENST00000553439 PRDM2Q13029 1718 aa11.02□□□□□ -0.65
NGDN-204ENST00000553439 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
NGDN-204ENST00000553439 CYB5RLQ6IPT4 315 aa10.98□□□□□ -0.65
NGDN-204ENST00000553439 CHD1O14646 1710 aa10.97□□□□□ -0.65
NGDN-204ENST00000553439 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
NGDN-204ENST00000553439 CFTRP13569 1480 aa10.96□□□□□ -0.65
NGDN-204ENST00000553439 WDR97A6NE52 1622 aa10.95□□□□□ -0.66
NGDN-204ENST00000553439 CLASP1Q7Z460 1538 aa10.92□□□□□ -0.66
NGDN-204ENST00000553439 ABCC8Q09428 1581 aa10.92□□□□□ -0.66
NGDN-204ENST00000553439 EIF4G3O43432 1585 aaKnown RBP10.91□□□□□ -0.66
NGDN-204ENST00000553439 SENP3Q9H4L4 574 aaPredicted RBP10.91□□□□□ -0.66
NGDN-204ENST00000553439 ERCC6L2Q5T890 1561 aa10.89□□□□□ -0.67
NGDN-204ENST00000553439 ADRA2BP18089 450 aa10.85□□□□□ -0.67
NGDN-204ENST00000553439 SYNJ1O43426 1573 aa10.84□□□□□ -0.67
NGDN-204ENST00000553439 ZNF608Q9ULD9 1512 aaPredicted RBP10.84□□□□□ -0.67
NGDN-204ENST00000553439 MROH2BQ7Z745 1585 aa10.83□□□□□ -0.68
NGDN-204ENST00000553439 KCNA4P22459 653 aa10.82□□□□□ -0.68
NGDN-204ENST00000553439 TARBP1Q13395 1621 aaKnown RBP10.8□□□□□ -0.68
NGDN-204ENST00000553439 KIF13AQ9H1H9 1805 aa10.78□□□□□ -0.68
NGDN-204ENST00000553439 DNMBPQ6XZF7 1577 aa10.76□□□□□ -0.69
NGDN-204ENST00000553439 TOPBP1Q92547 1522 aa10.76□□□□□ -0.69
NGDN-204ENST00000553439 MAGI1Q96QZ7 1491 aaPredicted RBP10.73□□□□□ -0.69
NGDN-204ENST00000553439 GAPVD1Q14C86 1478 aa10.72□□□□□ -0.69
NGDN-204ENST00000553439 FBXO41Q8TF61 875 aa10.68□□□□□ -0.7
NGDN-204ENST00000553439 WIZO95785 1651 aa10.66□□□□□ -0.7
NGDN-204ENST00000553439 TOP2AP11388 1531 aaKnown RBP10.66□□□□□ -0.7
NGDN-204ENST00000553439 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
NGDN-204ENST00000553439 SYNJ2O15056 1496 aa10.64□□□□□ -0.71
NGDN-204ENST00000553439 AQRO60306 1485 aaKnown RBP eCLIP10.62□□□□□ -0.713e-7■■■■■ 36
NGDN-204ENST00000553439 KDM6BO15054 1643 aa10.61□□□□□ -0.71
NGDN-204ENST00000553439 HECW2Q9P2P5 1572 aa10.61□□□□□ -0.71
NGDN-204ENST00000553439 MAPKBP1O60336 1514 aa10.61□□□□□ -0.71
NGDN-204ENST00000553439 SHROOM2Q13796 1616 aa10.6□□□□□ -0.71
NGDN-204ENST00000553439 SNAPC4Q5SXM2 1469 aa10.6□□□□□ -0.71
NGDN-204ENST00000553439 ABCC10Q5T3U5 1492 aa10.6□□□□□ -0.71
NGDN-204ENST00000553439 PPP6R1Q9UPN7 881 aa10.59□□□□□ -0.71
NGDN-204ENST00000553439 GRIN2BQ13224 1484 aa10.58□□□□□ -0.72
NGDN-204ENST00000553439 POLA1P09884 1462 aaPredicted RBP10.56□□□□□ -0.72
NGDN-204ENST00000553439 DIP2BQ9P265 1576 aa10.56□□□□□ -0.72
NGDN-204ENST00000553439 PBRM1Q86U86 1689 aa10.53□□□□□ -0.72
NGDN-204ENST00000553439 LMTK3Q96Q04 1460 aa10.52□□□□□ -0.72
NGDN-204ENST00000553439 SOCS7O14512 581 aa10.52□□□□□ -0.73
NGDN-204ENST00000553439 CHMP7Q8WUX9 453 aaPredicted RBP10.51□□□□□ -0.73
NGDN-204ENST00000553439 CEP170Q5SW79 1584 aa10.5□□□□□ -0.73
NGDN-204ENST00000553439 FBLN2P98095 1184 aa10.5□□□□□ -0.73
NGDN-204ENST00000553439 TOP2BQ02880 1626 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms