RNA–Protein interactions for RNA: ENST00000553404.5

LIN52-201, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN52, Length 2,339 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-201ENST00000553404 NISCHQ9Y2I1 1504 aa22.16■■□□□ 1.14
LIN52-201ENST00000553404 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
LIN52-201ENST00000553404 ABCC9O60706 1549 aa19.65■□□□□ 0.74
LIN52-201ENST00000553404 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
LIN52-201ENST00000553404 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
LIN52-201ENST00000553404 NACADO15069 1562 aa18.61■□□□□ 0.57
LIN52-201ENST00000553404 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
LIN52-201ENST00000553404 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.53
LIN52-201ENST00000553404 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
LIN52-201ENST00000553404 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
LIN52-201ENST00000553404 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
LIN52-201ENST00000553404 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
LIN52-201ENST00000553404 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
LIN52-201ENST00000553404 SCRIBQ14160 1630 aa18.08■□□□□ 0.49
LIN52-201ENST00000553404 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
LIN52-201ENST00000553404 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
LIN52-201ENST00000553404 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
LIN52-201ENST00000553404 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
LIN52-201ENST00000553404 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
LIN52-201ENST00000553404 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
LIN52-201ENST00000553404 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
LIN52-201ENST00000553404 BAZ1AQ9NRL2 1556 aaPredicted RBP17.16■□□□□ 0.34
LIN52-201ENST00000553404 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
LIN52-201ENST00000553404 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
LIN52-201ENST00000553404 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
LIN52-201ENST00000553404 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
LIN52-201ENST00000553404 PEG3Q9GZU2 1588 aa17.01■□□□□ 0.31
LIN52-201ENST00000553404 NESP48681 1621 aa16.95■□□□□ 0.3
LIN52-201ENST00000553404 WIZO95785 1651 aa16.93■□□□□ 0.3
LIN52-201ENST00000553404 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
LIN52-201ENST00000553404 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
LIN52-201ENST00000553404 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
LIN52-201ENST00000553404 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
LIN52-201ENST00000553404 CUX2O14529 1486 aa16.72■□□□□ 0.27
LIN52-201ENST00000553404 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
LIN52-201ENST00000553404 KIF21AQ7Z4S6 1674 aa16.67■□□□□ 0.26
LIN52-201ENST00000553404 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
LIN52-201ENST00000553404 THOC2Q8NI27 1593 aaKnown RBP16.63■□□□□ 0.25
LIN52-201ENST00000553404 CFTRP13569 1480 aa16.56■□□□□ 0.24
LIN52-201ENST00000553404 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
LIN52-201ENST00000553404 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
LIN52-201ENST00000553404 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
LIN52-201ENST00000553404 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.24
LIN52-201ENST00000553404 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
LIN52-201ENST00000553404 WDR62O43379 1518 aa16.45■□□□□ 0.22
LIN52-201ENST00000553404 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
LIN52-201ENST00000553404 PELP1Q8IZL8 1130 aaKnown RBP16.4■□□□□ 0.22
LIN52-201ENST00000553404 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
LIN52-201ENST00000553404 HRCP23327 699 aa16.36■□□□□ 0.21
LIN52-201ENST00000553404 PRDM2Q13029 1718 aa16.33■□□□□ 0.21
LIN52-201ENST00000553404 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
LIN52-201ENST00000553404 MYT1Q01538 1121 aa16.22■□□□□ 0.19
LIN52-201ENST00000553404 CHIC1Q5VXU3 224 aa16.2■□□□□ 0.18
LIN52-201ENST00000553404 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
LIN52-201ENST00000553404 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
LIN52-201ENST00000553404 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
LIN52-201ENST00000553404 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
LIN52-201ENST00000553404 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
LIN52-201ENST00000553404 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
LIN52-201ENST00000553404 RAD54L2Q9Y4B4 1467 aa16.09■□□□□ 0.17
LIN52-201ENST00000553404 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.17
LIN52-201ENST00000553404 CUX1P39880 1505 aa16.06■□□□□ 0.16
LIN52-201ENST00000553404 SOGA1O94964 1423 aa16.06■□□□□ 0.16
LIN52-201ENST00000553404 TARBP1Q13395 1621 aaKnown RBP16.06■□□□□ 0.16
LIN52-201ENST00000553404 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
LIN52-201ENST00000553404 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
LIN52-201ENST00000553404 TDRD9Q8NDG6 1382 aaKnown RBP16.04■□□□□ 0.16
LIN52-201ENST00000553404 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
LIN52-201ENST00000553404 TRIM41Q8WV44 630 aa16.02■□□□□ 0.15
LIN52-201ENST00000553404 FBLN2P98095 1184 aa16■□□□□ 0.15
LIN52-201ENST00000553404 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.15
LIN52-201ENST00000553404 PCGF6Q9BYE7 350 aa15.93■□□□□ 0.14
LIN52-201ENST00000553404 CHD1O14646 1710 aa15.89■□□□□ 0.13
LIN52-201ENST00000553404 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
LIN52-201ENST00000553404 SNAPC4Q5SXM2 1469 aa15.88■□□□□ 0.13
LIN52-201ENST00000553404 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
LIN52-201ENST00000553404 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
LIN52-201ENST00000553404 GRIN2BQ13224 1484 aa15.85■□□□□ 0.13
LIN52-201ENST00000553404 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
LIN52-201ENST00000553404 WDR97A6NE52 1622 aa15.83■□□□□ 0.13
LIN52-201ENST00000553404 ABCA10Q8WWZ4 1543 aa15.83■□□□□ 0.12
LIN52-201ENST00000553404 RIMBP3CA6NJZ7 1639 aa15.82■□□□□ 0.12
LIN52-201ENST00000553404 RIMBP3BA6NNM3 1639 aa15.82■□□□□ 0.12
LIN52-201ENST00000553404 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
LIN52-201ENST00000553404 RIMBP3Q9UFD9 1639 aa15.82■□□□□ 0.12
LIN52-201ENST00000553404 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
LIN52-201ENST00000553404 ARHGEF11O15085 1522 aa15.79■□□□□ 0.12
LIN52-201ENST00000553404 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
LIN52-201ENST00000553404 CYB5RLQ6IPT4 315 aa15.78■□□□□ 0.12
LIN52-201ENST00000553404 PBRM1Q86U86 1689 aa15.77■□□□□ 0.12
LIN52-201ENST00000553404 ABCA5Q8WWZ7 1642 aa15.77■□□□□ 0.11
LIN52-201ENST00000553404 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
LIN52-201ENST00000553404 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
LIN52-201ENST00000553404 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
LIN52-201ENST00000553404 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
LIN52-201ENST00000553404 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
LIN52-201ENST00000553404 ADAMTS12P58397 1594 aa15.64■□□□□ 0.09
LIN52-201ENST00000553404 FHAD1B1AJZ9 1412 aa15.63■□□□□ 0.09
LIN52-201ENST00000553404 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
LIN52-201ENST00000553404 CEP170Q5SW79 1584 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms