RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 NISCHQ9Y2I1 1504 aa25.01■■□□□ 1.59
LINC00517-201ENST00000553396 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
LINC00517-201ENST00000553396 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
LINC00517-201ENST00000553396 ABCC9O60706 1549 aa21.96■■□□□ 1.11
LINC00517-201ENST00000553396 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
LINC00517-201ENST00000553396 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
LINC00517-201ENST00000553396 DCAF8L2P0C7V8 631 aa20.97■□□□□ 0.95
LINC00517-201ENST00000553396 NACADO15069 1562 aa20.97■□□□□ 0.95
LINC00517-201ENST00000553396 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
LINC00517-201ENST00000553396 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
LINC00517-201ENST00000553396 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
LINC00517-201ENST00000553396 UNC13AQ9UPW8 1703 aa20.64■□□□□ 0.89
LINC00517-201ENST00000553396 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
LINC00517-201ENST00000553396 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
LINC00517-201ENST00000553396 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
LINC00517-201ENST00000553396 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
LINC00517-201ENST00000553396 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
LINC00517-201ENST00000553396 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
LINC00517-201ENST00000553396 CC2D2AQ9P2K1 1620 aa19.86■□□□□ 0.77
LINC00517-201ENST00000553396 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
LINC00517-201ENST00000553396 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
LINC00517-201ENST00000553396 SMARCA4P51532 1647 aa19.46■□□□□ 0.71
LINC00517-201ENST00000553396 BAZ1AQ9NRL2 1556 aaPredicted RBP19.4■□□□□ 0.7
LINC00517-201ENST00000553396 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
LINC00517-201ENST00000553396 NCAPD3P42695 1498 aa19.33■□□□□ 0.68
LINC00517-201ENST00000553396 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
LINC00517-201ENST00000553396 PHF23Q9BUL5 403 aaPredicted RBP19.3■□□□□ 0.68
LINC00517-201ENST00000553396 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
LINC00517-201ENST00000553396 HMGXB3Q12766 1538 aa19.25■□□□□ 0.67
LINC00517-201ENST00000553396 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
LINC00517-201ENST00000553396 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
LINC00517-201ENST00000553396 WIZO95785 1651 aa19.11■□□□□ 0.65
LINC00517-201ENST00000553396 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
LINC00517-201ENST00000553396 NESP48681 1621 aa18.97■□□□□ 0.63
LINC00517-201ENST00000553396 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
LINC00517-201ENST00000553396 TOP2AP11388 1531 aaKnown RBP18.87■□□□□ 0.61
LINC00517-201ENST00000553396 LAMC3Q9Y6N6 1575 aa18.87■□□□□ 0.61
LINC00517-201ENST00000553396 KIF21AQ7Z4S6 1674 aa18.78■□□□□ 0.6
LINC00517-201ENST00000553396 CADPSQ9ULU8 1353 aa18.77■□□□□ 0.6
LINC00517-201ENST00000553396 CUX2O14529 1486 aa18.72■□□□□ 0.59
LINC00517-201ENST00000553396 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
LINC00517-201ENST00000553396 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
LINC00517-201ENST00000553396 CFTRP13569 1480 aa18.64■□□□□ 0.57
LINC00517-201ENST00000553396 CCDC88BA6NC98 1476 aa18.63■□□□□ 0.57
LINC00517-201ENST00000553396 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.57
LINC00517-201ENST00000553396 CEP164Q9UPV0 1460 aa18.58■□□□□ 0.56
LINC00517-201ENST00000553396 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
LINC00517-201ENST00000553396 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
LINC00517-201ENST00000553396 WDR62O43379 1518 aa18.52■□□□□ 0.56
LINC00517-201ENST00000553396 SUPT5HO00267 1087 aaKnown RBP18.48■□□□□ 0.55
LINC00517-201ENST00000553396 URB2Q14146 1524 aaKnown RBP18.41■□□□□ 0.54
LINC00517-201ENST00000553396 FOXD1Q16676 465 aa18.31■□□□□ 0.52
LINC00517-201ENST00000553396 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
LINC00517-201ENST00000553396 DNAJC5Q9H3Z4 198 aa18.26■□□□□ 0.51
LINC00517-201ENST00000553396 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
LINC00517-201ENST00000553396 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
LINC00517-201ENST00000553396 IFT140Q96RY7 1462 aa18.17■□□□□ 0.5
LINC00517-201ENST00000553396 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
LINC00517-201ENST00000553396 POLA1P09884 1462 aaPredicted RBP18.12■□□□□ 0.49
LINC00517-201ENST00000553396 CUX1P39880 1505 aa18.11■□□□□ 0.49
LINC00517-201ENST00000553396 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
LINC00517-201ENST00000553396 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.49
LINC00517-201ENST00000553396 FGD5Q6ZNL6 1462 aa18.07■□□□□ 0.48
LINC00517-201ENST00000553396 RAD54L2Q9Y4B4 1467 aa18.06■□□□□ 0.48
LINC00517-201ENST00000553396 SOGA1O94964 1423 aa18.01■□□□□ 0.47
LINC00517-201ENST00000553396 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.47
LINC00517-201ENST00000553396 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
LINC00517-201ENST00000553396 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
LINC00517-201ENST00000553396 SYNJ1O43426 1573 aa17.93■□□□□ 0.46
LINC00517-201ENST00000553396 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
LINC00517-201ENST00000553396 BIVM-ERCC5R4GMW8 1640 aa17.92■□□□□ 0.46
LINC00517-201ENST00000553396 TOP2BQ02880 1626 aa17.91■□□□□ 0.46
LINC00517-201ENST00000553396 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
LINC00517-201ENST00000553396 CHD1O14646 1710 aa17.9■□□□□ 0.46
LINC00517-201ENST00000553396 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
LINC00517-201ENST00000553396 PBRM1Q86U86 1689 aa17.86■□□□□ 0.45
LINC00517-201ENST00000553396 SNAPC4Q5SXM2 1469 aa17.85■□□□□ 0.45
LINC00517-201ENST00000553396 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.45
LINC00517-201ENST00000553396 FBLN2P98095 1184 aa17.83■□□□□ 0.44
LINC00517-201ENST00000553396 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
LINC00517-201ENST00000553396 GAPVD1Q14C86 1478 aa17.82■□□□□ 0.44
LINC00517-201ENST00000553396 MAGI1Q96QZ7 1491 aaPredicted RBP17.79■□□□□ 0.44
LINC00517-201ENST00000553396 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
LINC00517-201ENST00000553396 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
LINC00517-201ENST00000553396 RIMBP3CA6NJZ7 1639 aa17.71■□□□□ 0.43
LINC00517-201ENST00000553396 RIMBP3BA6NNM3 1639 aa17.71■□□□□ 0.43
LINC00517-201ENST00000553396 RIMBP3Q9UFD9 1639 aa17.71■□□□□ 0.43
LINC00517-201ENST00000553396 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
LINC00517-201ENST00000553396 ARHGEF11O15085 1522 aa17.68■□□□□ 0.42
LINC00517-201ENST00000553396 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
LINC00517-201ENST00000553396 ERICH3Q5RHP9 1530 aa17.64■□□□□ 0.41
LINC00517-201ENST00000553396 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
LINC00517-201ENST00000553396 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
LINC00517-201ENST00000553396 FHAD1B1AJZ9 1412 aa17.59■□□□□ 0.41
LINC00517-201ENST00000553396 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
LINC00517-201ENST00000553396 CEP170Q5SW79 1584 aa17.55■□□□□ 0.4
LINC00517-201ENST00000553396 ARAP1Q96P48 1450 aa17.53■□□□□ 0.4
LINC00517-201ENST00000553396 NUP160Q12769 1436 aa17.52■□□□□ 0.4
LINC00517-201ENST00000553396 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
LINC00517-201ENST00000553396 CUL7Q14999 1698 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms