RNA–Protein interactions for RNA: ENST00000553297.1

NID2-202, Transcript of nidogen 2, humanhuman

TSL 2

Gene NID2, Length 798 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-202ENST00000553297 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
NID2-202ENST00000553297 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
NID2-202ENST00000553297 CCDC180Q9P1Z9 1646 aa20.68■□□□□ 0.9
NID2-202ENST00000553297 ABCC9O60706 1549 aa20.53■□□□□ 0.88
NID2-202ENST00000553297 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
NID2-202ENST00000553297 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
NID2-202ENST00000553297 NACADO15069 1562 aa19.5■□□□□ 0.71
NID2-202ENST00000553297 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
NID2-202ENST00000553297 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
NID2-202ENST00000553297 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
NID2-202ENST00000553297 PABPN1Q86U42 306 aaKnown RBP eCLIP19.09■□□□□ 0.65
NID2-202ENST00000553297 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
NID2-202ENST00000553297 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
NID2-202ENST00000553297 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
NID2-202ENST00000553297 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
NID2-202ENST00000553297 SCRIBQ14160 1630 aa18.83■□□□□ 0.61
NID2-202ENST00000553297 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
NID2-202ENST00000553297 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
NID2-202ENST00000553297 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
NID2-202ENST00000553297 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
NID2-202ENST00000553297 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
NID2-202ENST00000553297 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
NID2-202ENST00000553297 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
NID2-202ENST00000553297 NCAPD3P42695 1498 aa17.94■□□□□ 0.46
NID2-202ENST00000553297 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
NID2-202ENST00000553297 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
NID2-202ENST00000553297 HMGXB3Q12766 1538 aa17.87■□□□□ 0.45
NID2-202ENST00000553297 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
NID2-202ENST00000553297 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
NID2-202ENST00000553297 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
NID2-202ENST00000553297 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
NID2-202ENST00000553297 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
NID2-202ENST00000553297 CUX2O14529 1486 aa17.69■□□□□ 0.42
NID2-202ENST00000553297 NESP48681 1621 aa17.61■□□□□ 0.41
NID2-202ENST00000553297 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
NID2-202ENST00000553297 WIZO95785 1651 aa17.54■□□□□ 0.4
NID2-202ENST00000553297 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
NID2-202ENST00000553297 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
NID2-202ENST00000553297 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
NID2-202ENST00000553297 THOC2Q8NI27 1593 aaKnown RBP17.45■□□□□ 0.38
NID2-202ENST00000553297 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
NID2-202ENST00000553297 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
NID2-202ENST00000553297 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
NID2-202ENST00000553297 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
NID2-202ENST00000553297 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
NID2-202ENST00000553297 WDR62O43379 1518 aa17.25■□□□□ 0.35
NID2-202ENST00000553297 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
NID2-202ENST00000553297 CFTRP13569 1480 aa17.22■□□□□ 0.35
NID2-202ENST00000553297 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
NID2-202ENST00000553297 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
NID2-202ENST00000553297 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
NID2-202ENST00000553297 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
NID2-202ENST00000553297 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
NID2-202ENST00000553297 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
NID2-202ENST00000553297 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
NID2-202ENST00000553297 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.3
NID2-202ENST00000553297 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
NID2-202ENST00000553297 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
NID2-202ENST00000553297 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
NID2-202ENST00000553297 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
NID2-202ENST00000553297 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
NID2-202ENST00000553297 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
NID2-202ENST00000553297 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.26
NID2-202ENST00000553297 SOGA1O94964 1423 aa16.7■□□□□ 0.26
NID2-202ENST00000553297 CHD1O14646 1710 aa16.69■□□□□ 0.26
NID2-202ENST00000553297 FBLN2P98095 1184 aa16.68■□□□□ 0.26
NID2-202ENST00000553297 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
NID2-202ENST00000553297 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
NID2-202ENST00000553297 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
NID2-202ENST00000553297 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
NID2-202ENST00000553297 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
NID2-202ENST00000553297 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
NID2-202ENST00000553297 RAD54L2Q9Y4B4 1467 aa16.66■□□□□ 0.26
NID2-202ENST00000553297 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
NID2-202ENST00000553297 CUX1P39880 1505 aa16.63■□□□□ 0.25
NID2-202ENST00000553297 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
NID2-202ENST00000553297 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
NID2-202ENST00000553297 SNAPC4Q5SXM2 1469 aa16.56■□□□□ 0.24
NID2-202ENST00000553297 GRIN2BQ13224 1484 aa16.55■□□□□ 0.24
NID2-202ENST00000553297 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
NID2-202ENST00000553297 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
NID2-202ENST00000553297 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
NID2-202ENST00000553297 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
NID2-202ENST00000553297 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
NID2-202ENST00000553297 CYB5RLQ6IPT4 315 aa16.49■□□□□ 0.23
NID2-202ENST00000553297 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
NID2-202ENST00000553297 WRNQ14191 1432 aaPredicted RBP eCLIP16.47■□□□□ 0.23
NID2-202ENST00000553297 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
NID2-202ENST00000553297 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
NID2-202ENST00000553297 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
NID2-202ENST00000553297 TOP2BQ02880 1626 aa16.44■□□□□ 0.22
NID2-202ENST00000553297 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
NID2-202ENST00000553297 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
NID2-202ENST00000553297 FOXD1Q16676 465 aa16.4■□□□□ 0.22
NID2-202ENST00000553297 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
NID2-202ENST00000553297 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
NID2-202ENST00000553297 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
NID2-202ENST00000553297 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
NID2-202ENST00000553297 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
NID2-202ENST00000553297 CEP170Q5SW79 1584 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms