RNA–Protein interactions for RNA: ENST00000553228.5

AL928654.4-203, humanhuman

APPRIS ALT2 TSL 2

Gene AL928654.4, Length 337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL928654.4-203ENST00000553228 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
AL928654.4-203ENST00000553228 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
AL928654.4-203ENST00000553228 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
AL928654.4-203ENST00000553228 ABCC9O60706 1549 aa25■■□□□ 1.59
AL928654.4-203ENST00000553228 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
AL928654.4-203ENST00000553228 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
AL928654.4-203ENST00000553228 DCAF8L2P0C7V8 631 aa24.62■■□□□ 1.53
AL928654.4-203ENST00000553228 NACADO15069 1562 aa24.62■■□□□ 1.53
AL928654.4-203ENST00000553228 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
AL928654.4-203ENST00000553228 SCRIBQ14160 1630 aa24.07■■□□□ 1.44
AL928654.4-203ENST00000553228 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
AL928654.4-203ENST00000553228 UNC13AQ9UPW8 1703 aa23.93■■□□□ 1.42
AL928654.4-203ENST00000553228 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
AL928654.4-203ENST00000553228 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
AL928654.4-203ENST00000553228 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
AL928654.4-203ENST00000553228 CECR2Q9BXF3 1484 aa23.21■■□□□ 1.31
AL928654.4-203ENST00000553228 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
AL928654.4-203ENST00000553228 MROH2BQ7Z745 1585 aa23.09■■□□□ 1.29
AL928654.4-203ENST00000553228 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.29
AL928654.4-203ENST00000553228 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
AL928654.4-203ENST00000553228 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
AL928654.4-203ENST00000553228 PEG3Q9GZU2 1588 aa22.92■■□□□ 1.26
AL928654.4-203ENST00000553228 WIZO95785 1651 aa22.9■■□□□ 1.26
AL928654.4-203ENST00000553228 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
AL928654.4-203ENST00000553228 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
AL928654.4-203ENST00000553228 TOP2AP11388 1531 aaKnown RBP22.73■■□□□ 1.23
AL928654.4-203ENST00000553228 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
AL928654.4-203ENST00000553228 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
AL928654.4-203ENST00000553228 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
AL928654.4-203ENST00000553228 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
AL928654.4-203ENST00000553228 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
AL928654.4-203ENST00000553228 DNAJC5BQ9UF47 199 aa22.2■■□□□ 1.14
AL928654.4-203ENST00000553228 CFTRP13569 1480 aa22.08■■□□□ 1.12
AL928654.4-203ENST00000553228 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
AL928654.4-203ENST00000553228 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
AL928654.4-203ENST00000553228 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
AL928654.4-203ENST00000553228 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
AL928654.4-203ENST00000553228 NESP48681 1621 aa21.85■■□□□ 1.09
AL928654.4-203ENST00000553228 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
AL928654.4-203ENST00000553228 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
AL928654.4-203ENST00000553228 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
AL928654.4-203ENST00000553228 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
AL928654.4-203ENST00000553228 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
AL928654.4-203ENST00000553228 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
AL928654.4-203ENST00000553228 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
AL928654.4-203ENST00000553228 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
AL928654.4-203ENST00000553228 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
AL928654.4-203ENST00000553228 TOP2BQ02880 1626 aa21.68■■□□□ 1.06
AL928654.4-203ENST00000553228 CUX1P39880 1505 aa21.63■■□□□ 1.05
AL928654.4-203ENST00000553228 DNMBPQ6XZF7 1577 aa21.6■■□□□ 1.05
AL928654.4-203ENST00000553228 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
AL928654.4-203ENST00000553228 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
AL928654.4-203ENST00000553228 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
AL928654.4-203ENST00000553228 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
AL928654.4-203ENST00000553228 WDR62O43379 1518 aa21.45■■□□□ 1.02
AL928654.4-203ENST00000553228 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
AL928654.4-203ENST00000553228 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
AL928654.4-203ENST00000553228 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
AL928654.4-203ENST00000553228 EEA1Q15075 1411 aa21.38■■□□□ 1.01
AL928654.4-203ENST00000553228 SOGA1O94964 1423 aa21.31■■□□□ 1
AL928654.4-203ENST00000553228 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
AL928654.4-203ENST00000553228 WDR97A6NE52 1622 aa21.29■■□□□ 1
AL928654.4-203ENST00000553228 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
AL928654.4-203ENST00000553228 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
AL928654.4-203ENST00000553228 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
AL928654.4-203ENST00000553228 CUX2O14529 1486 aa21.23■□□□□ 0.99
AL928654.4-203ENST00000553228 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
AL928654.4-203ENST00000553228 IFT140Q96RY7 1462 aa21.22■□□□□ 0.99
AL928654.4-203ENST00000553228 FAM9AQ8IZU1 332 aaPredicted RBP21.18■□□□□ 0.98
AL928654.4-203ENST00000553228 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
AL928654.4-203ENST00000553228 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
AL928654.4-203ENST00000553228 KIF21BO75037 1637 aa21.11■□□□□ 0.97
AL928654.4-203ENST00000553228 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
AL928654.4-203ENST00000553228 ERICH3Q5RHP9 1530 aa21.07■□□□□ 0.96
AL928654.4-203ENST00000553228 CUL7Q14999 1698 aa21.05■□□□□ 0.96
AL928654.4-203ENST00000553228 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
AL928654.4-203ENST00000553228 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
AL928654.4-203ENST00000553228 IGF1RP08069 1367 aa21.04■□□□□ 0.96
AL928654.4-203ENST00000553228 PRXQ9BXM0 1461 aa21.04■□□□□ 0.96
AL928654.4-203ENST00000553228 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
AL928654.4-203ENST00000553228 GOLGA3Q08378 1498 aa21.01■□□□□ 0.95
AL928654.4-203ENST00000553228 ZNF608Q9ULD9 1512 aaPredicted RBP21.01■□□□□ 0.95
AL928654.4-203ENST00000553228 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
AL928654.4-203ENST00000553228 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.95
AL928654.4-203ENST00000553228 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
AL928654.4-203ENST00000553228 CARMIL1Q5VZK9 1371 aa20.95■□□□□ 0.94
AL928654.4-203ENST00000553228 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
AL928654.4-203ENST00000553228 ADAMTS12P58397 1594 aa20.91■□□□□ 0.94
AL928654.4-203ENST00000553228 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
AL928654.4-203ENST00000553228 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
AL928654.4-203ENST00000553228 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
AL928654.4-203ENST00000553228 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
AL928654.4-203ENST00000553228 UBTFP17480 764 aaKnown RBP20.81■□□□□ 0.92
AL928654.4-203ENST00000553228 EHMT2Q96KQ7 1210 aa20.81■□□□□ 0.92
AL928654.4-203ENST00000553228 SYNJ2O15056 1496 aa20.77■□□□□ 0.92
AL928654.4-203ENST00000553228 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
AL928654.4-203ENST00000553228 GRIN2AQ12879 1464 aa20.72■□□□□ 0.91
AL928654.4-203ENST00000553228 CEP162Q5TB80 1403 aa20.71■□□□□ 0.91
AL928654.4-203ENST00000553228 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
AL928654.4-203ENST00000553228 CHD1O14646 1710 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms