RNA–Protein interactions for RNA: ENST00000553160.1

RDH5-210, Transcript of retinol dehydrogenase 5, humanhuman

TSL 4

Gene RDH5, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH5-210ENST00000553160 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
RDH5-210ENST00000553160 ABCC9O60706 1549 aa15.66■□□□□ 0.1
RDH5-210ENST00000553160 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
RDH5-210ENST00000553160 DCAF8L2P0C7V8 631 aa14.83□□□□□ -0.04
RDH5-210ENST00000553160 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
RDH5-210ENST00000553160 NACADO15069 1562 aa14.73□□□□□ -0.05
RDH5-210ENST00000553160 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
RDH5-210ENST00000553160 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
RDH5-210ENST00000553160 ZCCHC6Q5VYS8 1495 aaKnown RBP14.6□□□□□ -0.07
RDH5-210ENST00000553160 UNC13AQ9UPW8 1703 aa14.59□□□□□ -0.07
RDH5-210ENST00000553160 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
RDH5-210ENST00000553160 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.08
RDH5-210ENST00000553160 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
RDH5-210ENST00000553160 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
RDH5-210ENST00000553160 SCRIBQ14160 1630 aa14.4□□□□□ -0.1
RDH5-210ENST00000553160 CC2D2AQ9P2K1 1620 aa14.1□□□□□ -0.15
RDH5-210ENST00000553160 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
RDH5-210ENST00000553160 SHROOM4Q9ULL8 1493 aa14.08□□□□□ -0.16
RDH5-210ENST00000553160 CECR2Q9BXF3 1484 aa14.03□□□□□ -0.16
RDH5-210ENST00000553160 SLC24A1O60721 1099 aa13.93□□□□□ -0.18
RDH5-210ENST00000553160 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
RDH5-210ENST00000553160 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
RDH5-210ENST00000553160 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
RDH5-210ENST00000553160 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
RDH5-210ENST00000553160 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
RDH5-210ENST00000553160 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
RDH5-210ENST00000553160 NESP48681 1621 aa13.54□□□□□ -0.24
RDH5-210ENST00000553160 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
RDH5-210ENST00000553160 HMGXB3Q12766 1538 aa13.53□□□□□ -0.24
RDH5-210ENST00000553160 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
RDH5-210ENST00000553160 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
RDH5-210ENST00000553160 WIZO95785 1651 aa13.46□□□□□ -0.26
RDH5-210ENST00000553160 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
RDH5-210ENST00000553160 ERCC6Q03468 1493 aa13.41□□□□□ -0.26
RDH5-210ENST00000553160 RSF1Q96T23 1441 aaPredicted RBP13.35□□□□□ -0.27
RDH5-210ENST00000553160 THOC2Q8NI27 1593 aaKnown RBP13.29□□□□□ -0.28
RDH5-210ENST00000553160 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
RDH5-210ENST00000553160 CUX2O14529 1486 aa13.29□□□□□ -0.28
RDH5-210ENST00000553160 LAMC3Q9Y6N6 1575 aa13.27□□□□□ -0.29
RDH5-210ENST00000553160 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
RDH5-210ENST00000553160 TOP2AP11388 1531 aaKnown RBP13.22□□□□□ -0.29
RDH5-210ENST00000553160 DNAJC5Q9H3Z4 198 aa13.2□□□□□ -0.3
RDH5-210ENST00000553160 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
RDH5-210ENST00000553160 CCDC88BA6NC98 1476 aa13.12□□□□□ -0.31
RDH5-210ENST00000553160 CFTRP13569 1480 aa13.12□□□□□ -0.31
RDH5-210ENST00000553160 FANCD2Q9BXW9 1451 aa13.12□□□□□ -0.31
RDH5-210ENST00000553160 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
RDH5-210ENST00000553160 WDR62O43379 1518 aa13.09□□□□□ -0.31
RDH5-210ENST00000553160 CEP164Q9UPV0 1460 aa13.09□□□□□ -0.31
RDH5-210ENST00000553160 URB2Q14146 1524 aaKnown RBP13.06□□□□□ -0.32
RDH5-210ENST00000553160 PRDM2Q13029 1718 aa12.94□□□□□ -0.34
RDH5-210ENST00000553160 PHF23Q9BUL5 403 aaPredicted RBP12.94□□□□□ -0.34
RDH5-210ENST00000553160 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
RDH5-210ENST00000553160 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
RDH5-210ENST00000553160 TOPBP1Q92547 1522 aa12.9□□□□□ -0.34
RDH5-210ENST00000553160 DNMBPQ6XZF7 1577 aa12.82□□□□□ -0.36
RDH5-210ENST00000553160 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
RDH5-210ENST00000553160 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
RDH5-210ENST00000553160 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.36
RDH5-210ENST00000553160 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
RDH5-210ENST00000553160 TARBP1Q13395 1621 aaKnown RBP12.78□□□□□ -0.36
RDH5-210ENST00000553160 CUX1P39880 1505 aa12.78□□□□□ -0.36
RDH5-210ENST00000553160 EIF4G3O43432 1585 aaKnown RBP12.77□□□□□ -0.36
RDH5-210ENST00000553160 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
RDH5-210ENST00000553160 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
RDH5-210ENST00000553160 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
RDH5-210ENST00000553160 PLPPR3Q6T4P5 718 aa12.73□□□□□ -0.37
RDH5-210ENST00000553160 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
RDH5-210ENST00000553160 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
RDH5-210ENST00000553160 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
RDH5-210ENST00000553160 SOGA1O94964 1423 aa12.71□□□□□ -0.38
RDH5-210ENST00000553160 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
RDH5-210ENST00000553160 CHD1O14646 1710 aa12.66□□□□□ -0.38
RDH5-210ENST00000553160 FBLN2P98095 1184 aa12.63□□□□□ -0.39
RDH5-210ENST00000553160 SNAPC4Q5SXM2 1469 aa12.63□□□□□ -0.39
RDH5-210ENST00000553160 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
RDH5-210ENST00000553160 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
RDH5-210ENST00000553160 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
RDH5-210ENST00000553160 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
RDH5-210ENST00000553160 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
RDH5-210ENST00000553160 ARHGEF11O15085 1522 aa12.59□□□□□ -0.39
RDH5-210ENST00000553160 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
RDH5-210ENST00000553160 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
RDH5-210ENST00000553160 GRIN2BQ13224 1484 aa12.54□□□□□ -0.4
RDH5-210ENST00000553160 ABCA10Q8WWZ4 1543 aa12.54□□□□□ -0.4
RDH5-210ENST00000553160 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
RDH5-210ENST00000553160 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
RDH5-210ENST00000553160 BIVM-ERCC5R4GMW8 1640 aa12.53□□□□□ -0.4
RDH5-210ENST00000553160 TOP2BQ02880 1626 aa12.52□□□□□ -0.4
RDH5-210ENST00000553160 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
RDH5-210ENST00000553160 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
RDH5-210ENST00000553160 CLASP1Q7Z460 1538 aa12.52□□□□□ -0.41
RDH5-210ENST00000553160 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
RDH5-210ENST00000553160 CYB5RLQ6IPT4 315 aa12.5□□□□□ -0.41
RDH5-210ENST00000553160 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
RDH5-210ENST00000553160 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
RDH5-210ENST00000553160 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
RDH5-210ENST00000553160 KCNA4P22459 653 aa12.46□□□□□ -0.41
RDH5-210ENST00000553160 ERCC6L2Q5T890 1561 aa12.45□□□□□ -0.42
RDH5-210ENST00000553160 ADAMTS12P58397 1594 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms