RNA–Protein interactions for RNA: ENST00000552925.5

TMTC1-208, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best)

Gene TMTC1, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-208ENST00000552925 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
TMTC1-208ENST00000552925 ABCC9O60706 1549 aa21.3■■□□□ 1
TMTC1-208ENST00000552925 CCDC180Q9P1Z9 1646 aa21.02■□□□□ 0.96
TMTC1-208ENST00000552925 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
TMTC1-208ENST00000552925 RB1CC1Q8TDY2 1594 aa20.16■□□□□ 0.82
TMTC1-208ENST00000552925 NACADO15069 1562 aa19.97■□□□□ 0.79
TMTC1-208ENST00000552925 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
TMTC1-208ENST00000552925 DCAF8L2P0C7V8 631 aa19.73■□□□□ 0.75
TMTC1-208ENST00000552925 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
TMTC1-208ENST00000552925 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
TMTC1-208ENST00000552925 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
TMTC1-208ENST00000552925 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
TMTC1-208ENST00000552925 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
TMTC1-208ENST00000552925 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
TMTC1-208ENST00000552925 CECR2Q9BXF3 1484 aa19.24■□□□□ 0.67
TMTC1-208ENST00000552925 CC2D2AQ9P2K1 1620 aa19.23■□□□□ 0.67
TMTC1-208ENST00000552925 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
TMTC1-208ENST00000552925 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
TMTC1-208ENST00000552925 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
TMTC1-208ENST00000552925 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
TMTC1-208ENST00000552925 CUX2O14529 1486 aa18.53■□□□□ 0.56
TMTC1-208ENST00000552925 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
TMTC1-208ENST00000552925 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
TMTC1-208ENST00000552925 ATAD2BQ9ULI0 1458 aa18.34■□□□□ 0.53
TMTC1-208ENST00000552925 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
TMTC1-208ENST00000552925 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
TMTC1-208ENST00000552925 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
TMTC1-208ENST00000552925 NESP48681 1621 aa18.21■□□□□ 0.51
TMTC1-208ENST00000552925 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
TMTC1-208ENST00000552925 THOC2Q8NI27 1593 aaKnown RBP18.1■□□□□ 0.49
TMTC1-208ENST00000552925 BAZ1AQ9NRL2 1556 aaPredicted RBP18.09■□□□□ 0.49
TMTC1-208ENST00000552925 PEG3Q9GZU2 1588 aa18.08■□□□□ 0.48
TMTC1-208ENST00000552925 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
TMTC1-208ENST00000552925 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
TMTC1-208ENST00000552925 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
TMTC1-208ENST00000552925 KIF21AQ7Z4S6 1674 aa17.94■□□□□ 0.46
TMTC1-208ENST00000552925 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
TMTC1-208ENST00000552925 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
TMTC1-208ENST00000552925 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
TMTC1-208ENST00000552925 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.45
TMTC1-208ENST00000552925 WDR62O43379 1518 aa17.8■□□□□ 0.44
TMTC1-208ENST00000552925 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
TMTC1-208ENST00000552925 WIZO95785 1651 aa17.67■□□□□ 0.42
TMTC1-208ENST00000552925 FANCD2Q9BXW9 1451 aa17.65■□□□□ 0.42
TMTC1-208ENST00000552925 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
TMTC1-208ENST00000552925 CFTRP13569 1480 aa17.6■□□□□ 0.41
TMTC1-208ENST00000552925 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
TMTC1-208ENST00000552925 RSF1Q96T23 1441 aaPredicted RBP17.46■□□□□ 0.39
TMTC1-208ENST00000552925 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
TMTC1-208ENST00000552925 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
TMTC1-208ENST00000552925 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
TMTC1-208ENST00000552925 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
TMTC1-208ENST00000552925 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
TMTC1-208ENST00000552925 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
TMTC1-208ENST00000552925 PRDM2Q13029 1718 aa17.33■□□□□ 0.36
TMTC1-208ENST00000552925 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
TMTC1-208ENST00000552925 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
TMTC1-208ENST00000552925 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
TMTC1-208ENST00000552925 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
TMTC1-208ENST00000552925 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
TMTC1-208ENST00000552925 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
TMTC1-208ENST00000552925 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
TMTC1-208ENST00000552925 AQRO60306 1485 aaKnown RBP eCLIP17.15■□□□□ 0.34
TMTC1-208ENST00000552925 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
TMTC1-208ENST00000552925 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
TMTC1-208ENST00000552925 CHD1O14646 1710 aa17.12■□□□□ 0.33
TMTC1-208ENST00000552925 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
TMTC1-208ENST00000552925 POLA1P09884 1462 aaPredicted RBP17.08■□□□□ 0.33
TMTC1-208ENST00000552925 FBLN2P98095 1184 aa17.07■□□□□ 0.32
TMTC1-208ENST00000552925 SOGA1O94964 1423 aa17.01■□□□□ 0.31
TMTC1-208ENST00000552925 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
TMTC1-208ENST00000552925 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
TMTC1-208ENST00000552925 CLASP1Q7Z460 1538 aa16.98■□□□□ 0.31
TMTC1-208ENST00000552925 WDR97A6NE52 1622 aa16.98■□□□□ 0.31
TMTC1-208ENST00000552925 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
TMTC1-208ENST00000552925 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
TMTC1-208ENST00000552925 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
TMTC1-208ENST00000552925 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
TMTC1-208ENST00000552925 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
TMTC1-208ENST00000552925 GRIN2BQ13224 1484 aa16.9■□□□□ 0.3
TMTC1-208ENST00000552925 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
TMTC1-208ENST00000552925 CUX1P39880 1505 aa16.86■□□□□ 0.29
TMTC1-208ENST00000552925 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
TMTC1-208ENST00000552925 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
TMTC1-208ENST00000552925 ABCA10Q8WWZ4 1543 aa16.74■□□□□ 0.27
TMTC1-208ENST00000552925 ABCA5Q8WWZ7 1642 aa16.72■□□□□ 0.27
TMTC1-208ENST00000552925 GRIN2AQ12879 1464 aa16.67■□□□□ 0.26
TMTC1-208ENST00000552925 POTEDQ86YR6 584 aa16.67■□□□□ 0.26
TMTC1-208ENST00000552925 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
TMTC1-208ENST00000552925 SENP3Q9H4L4 574 aaPredicted RBP16.65■□□□□ 0.26
TMTC1-208ENST00000552925 NUP160Q12769 1436 aa16.65■□□□□ 0.26
TMTC1-208ENST00000552925 CEP170Q5SW79 1584 aa16.62■□□□□ 0.25
TMTC1-208ENST00000552925 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
TMTC1-208ENST00000552925 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
TMTC1-208ENST00000552925 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
TMTC1-208ENST00000552925 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
TMTC1-208ENST00000552925 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.23
TMTC1-208ENST00000552925 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
TMTC1-208ENST00000552925 BIVM-ERCC5R4GMW8 1640 aa16.51■□□□□ 0.23
TMTC1-208ENST00000552925 KIF13AQ9H1H9 1805 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms