RNA–Protein interactions for RNA: ENST00000552792.5

PFKM-228, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-228ENST00000552792 NISCHQ9Y2I1 1504 aa39.7■■■■□ 3.95
PFKM-228ENST00000552792 ABCC9O60706 1549 aa37.39■■■■□ 3.58
PFKM-228ENST00000552792 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.39
PFKM-228ENST00000552792 DNAJC5BQ9UF47 199 aa35.96■■■■□ 3.35
PFKM-228ENST00000552792 RB1CC1Q8TDY2 1594 aa35.1■■■■□ 3.21
PFKM-228ENST00000552792 PABPN1Q86U42 306 aaKnown RBP eCLIP34.58■■■■□ 3.13
PFKM-228ENST00000552792 NACADO15069 1562 aa34.52■■■■□ 3.12
PFKM-228ENST00000552792 UNC13AQ9UPW8 1703 aa34.3■■■■□ 3.08
PFKM-228ENST00000552792 DCAF8L2P0C7V8 631 aa34.17■■■■□ 3.06
PFKM-228ENST00000552792 BICRAQ9NZM4 1560 aa33.99■■■■□ 3.03
PFKM-228ENST00000552792 DNAJC5Q9H3Z4 198 aa33.99■■■■□ 3.03
PFKM-228ENST00000552792 CECR2Q9BXF3 1484 aa33.81■■■■□ 3
PFKM-228ENST00000552792 CC2D2AQ9P2K1 1620 aa33.72■■■□□ 2.99
PFKM-228ENST00000552792 MYO15BQ96JP2 1530 aa33.56■■■□□ 2.96
PFKM-228ENST00000552792 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
PFKM-228ENST00000552792 EIF4G1Q04637 1599 aaKnown RBP33.34■■■□□ 2.93
PFKM-228ENST00000552792 SCRIBQ14160 1630 aa32.97■■■□□ 2.87
PFKM-228ENST00000552792 CUX2O14529 1486 aa32.73■■■□□ 2.83
PFKM-228ENST00000552792 DCAF1Q9Y4B6 1507 aa32.7■■■□□ 2.83
PFKM-228ENST00000552792 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
PFKM-228ENST00000552792 ERCC6Q03468 1493 aa32.47■■■□□ 2.79
PFKM-228ENST00000552792 TRIM41Q8WV44 630 aa32.16■■■□□ 2.74
PFKM-228ENST00000552792 NCAPD3P42695 1498 aa31.8■■■□□ 2.68
PFKM-228ENST00000552792 NESP48681 1621 aa31.73■■■□□ 2.67
PFKM-228ENST00000552792 THOC2Q8NI27 1593 aaKnown RBP31.69■■■□□ 2.66
PFKM-228ENST00000552792 ATAD2BQ9ULI0 1458 aa31.56■■■□□ 2.64
PFKM-228ENST00000552792 HMGXB3Q12766 1538 aa31.53■■■□□ 2.64
PFKM-228ENST00000552792 SMARCA2P51531 1590 aa31.51■■■□□ 2.63
PFKM-228ENST00000552792 LAMC3Q9Y6N6 1575 aa31.39■■■□□ 2.61
PFKM-228ENST00000552792 KIF21AQ7Z4S6 1674 aa31.38■■■□□ 2.61
PFKM-228ENST00000552792 SMARCA4P51532 1647 aa31.29■■■□□ 2.6
PFKM-228ENST00000552792 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
PFKM-228ENST00000552792 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
PFKM-228ENST00000552792 BAZ1AQ9NRL2 1556 aaPredicted RBP31.18■■■□□ 2.58
PFKM-228ENST00000552792 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
PFKM-228ENST00000552792 OSCARQ8IYS5 282 aa31.02■■■□□ 2.56
PFKM-228ENST00000552792 WDR62O43379 1518 aa30.98■■■□□ 2.55
PFKM-228ENST00000552792 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
PFKM-228ENST00000552792 CADPSQ9ULU8 1353 aa30.8■■■□□ 2.52
PFKM-228ENST00000552792 RIMBP3CA6NJZ7 1639 aa30.78■■■□□ 2.52
PFKM-228ENST00000552792 RIMBP3BA6NNM3 1639 aa30.78■■■□□ 2.52
PFKM-228ENST00000552792 RIMBP3Q9UFD9 1639 aa30.78■■■□□ 2.52
PFKM-228ENST00000552792 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.51
PFKM-228ENST00000552792 AEBP2Q6ZN18 517 aaPredicted RBP30.6■■■□□ 2.49
PFKM-228ENST00000552792 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
PFKM-228ENST00000552792 TRHP20396 242 aaPredicted RBP30.55■■■□□ 2.48
PFKM-228ENST00000552792 ARHGEF11O15085 1522 aa30.53■■■□□ 2.48
PFKM-228ENST00000552792 FANCD2Q9BXW9 1451 aa30.51■■■□□ 2.48
PFKM-228ENST00000552792 CYB5RLQ6IPT4 315 aa30.39■■■□□ 2.46
PFKM-228ENST00000552792 URB2Q14146 1524 aaKnown RBP30.29■■■□□ 2.44
PFKM-228ENST00000552792 WIZO95785 1651 aa30.2■■■□□ 2.43
PFKM-228ENST00000552792 CFTRP13569 1480 aa30.19■■■□□ 2.42
PFKM-228ENST00000552792 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
PFKM-228ENST00000552792 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
PFKM-228ENST00000552792 IFT140Q96RY7 1462 aa30.09■■■□□ 2.41
PFKM-228ENST00000552792 CHD1O14646 1710 aa30.02■■■□□ 2.4
PFKM-228ENST00000552792 EIF4G3O43432 1585 aaKnown RBP29.98■■■□□ 2.39
PFKM-228ENST00000552792 PRDM2Q13029 1718 aa29.97■■■□□ 2.39
PFKM-228ENST00000552792 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.38
PFKM-228ENST00000552792 FBLN2P98095 1184 aa29.87■■■□□ 2.37
PFKM-228ENST00000552792 TOPBP1Q92547 1522 aa29.78■■■□□ 2.36
PFKM-228ENST00000552792 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
PFKM-228ENST00000552792 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.351e-6■■■■■ 33.8
PFKM-228ENST00000552792 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
PFKM-228ENST00000552792 DNMBPQ6XZF7 1577 aa29.6■■■□□ 2.33
PFKM-228ENST00000552792 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
PFKM-228ENST00000552792 CLASP1Q7Z460 1538 aa29.54■■■□□ 2.32
PFKM-228ENST00000552792 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
PFKM-228ENST00000552792 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
PFKM-228ENST00000552792 CHMP7Q8WUX9 453 aaPredicted RBP29.41■■■□□ 2.3
PFKM-228ENST00000552792 POLA1P09884 1462 aaPredicted RBP29.4■■■□□ 2.3
PFKM-228ENST00000552792 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
PFKM-228ENST00000552792 CCDC88BA6NC98 1476 aa29.36■■■□□ 2.29
PFKM-228ENST00000552792 TDRD9Q8NDG6 1382 aaKnown RBP29.34■■■□□ 2.29
PFKM-228ENST00000552792 RAD54L2Q9Y4B4 1467 aa29.3■■■□□ 2.28
PFKM-228ENST00000552792 ILDR1Q86SU0 546 aaPredicted RBP29.3■■■□□ 2.28
PFKM-228ENST00000552792 MAGI1Q96QZ7 1491 aaPredicted RBP29.29■■■□□ 2.28
PFKM-228ENST00000552792 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
PFKM-228ENST00000552792 SOGA1O94964 1423 aa29.25■■■□□ 2.27
PFKM-228ENST00000552792 SYNJ2O15056 1496 aa29.2■■■□□ 2.26
PFKM-228ENST00000552792 GRIN2BQ13224 1484 aa29.16■■■□□ 2.26
PFKM-228ENST00000552792 KIF13AQ9H1H9 1805 aa29.08■■■□□ 2.25
PFKM-228ENST00000552792 FGD5Q6ZNL6 1462 aa29.06■■■□□ 2.24
PFKM-228ENST00000552792 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
PFKM-228ENST00000552792 ERCC6L2Q5T890 1561 aa28.97■■■□□ 2.23
PFKM-228ENST00000552792 CEP170Q5SW79 1584 aa28.87■■■□□ 2.21
PFKM-228ENST00000552792 KDM4FA0A1W2PPD8 638 aa28.86■■■□□ 2.21
PFKM-228ENST00000552792 CUX1P39880 1505 aa28.81■■■□□ 2.2
PFKM-228ENST00000552792 KDM6BO15054 1643 aa28.78■■■□□ 2.2
PFKM-228ENST00000552792 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
PFKM-228ENST00000552792 FAM69CQ0P6D2 419 aa28.77■■■□□ 2.2
PFKM-228ENST00000552792 ABCA5Q8WWZ7 1642 aa28.73■■■□□ 2.19
PFKM-228ENST00000552792 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
PFKM-228ENST00000552792 ABCC10Q5T3U5 1492 aa28.7■■■□□ 2.18
PFKM-228ENST00000552792 NUP160Q12769 1436 aa28.67■■■□□ 2.18
PFKM-228ENST00000552792 NPM1P06748 294 aaKnown RBP eCLIP28.66■■■□□ 2.18
PFKM-228ENST00000552792 DIP2BQ9P265 1576 aa28.63■■■□□ 2.17
PFKM-228ENST00000552792 ABCA10Q8WWZ4 1543 aa28.63■■■□□ 2.17
PFKM-228ENST00000552792 ADAMTS12P58397 1594 aa28.62■■■□□ 2.17
PFKM-228ENST00000552792 TSPOAP1O95153 1857 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms