RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
ATF1-204ENST00000552487 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
ATF1-204ENST00000552487 ABCC9O60706 1549 aa24.16■■□□□ 1.46
ATF1-204ENST00000552487 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
ATF1-204ENST00000552487 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
ATF1-204ENST00000552487 NACADO15069 1562 aa22.93■■□□□ 1.26
ATF1-204ENST00000552487 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
ATF1-204ENST00000552487 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
ATF1-204ENST00000552487 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
ATF1-204ENST00000552487 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
ATF1-204ENST00000552487 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
ATF1-204ENST00000552487 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
ATF1-204ENST00000552487 BICRAQ9NZM4 1560 aa22.19■■□□□ 1.14
ATF1-204ENST00000552487 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
ATF1-204ENST00000552487 SCRIBQ14160 1630 aa22.12■■□□□ 1.13
ATF1-204ENST00000552487 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
ATF1-204ENST00000552487 EIF4G1Q04637 1599 aaKnown RBP21.76■■□□□ 1.07
ATF1-204ENST00000552487 CC2D2AQ9P2K1 1620 aa21.76■■□□□ 1.07
ATF1-204ENST00000552487 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
ATF1-204ENST00000552487 SMARCA2P51531 1590 aa21.12■□□□□ 0.97
ATF1-204ENST00000552487 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.97
ATF1-204ENST00000552487 BAZ1AQ9NRL2 1556 aaPredicted RBP21.07■□□□□ 0.96
ATF1-204ENST00000552487 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
ATF1-204ENST00000552487 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
ATF1-204ENST00000552487 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
ATF1-204ENST00000552487 BAZ1BQ9UIG0 1483 aaKnown RBP20.99■□□□□ 0.95
ATF1-204ENST00000552487 CUX2O14529 1486 aa20.81■□□□□ 0.92
ATF1-204ENST00000552487 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
ATF1-204ENST00000552487 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
ATF1-204ENST00000552487 NESP48681 1621 aa20.71■□□□□ 0.91
ATF1-204ENST00000552487 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
ATF1-204ENST00000552487 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
ATF1-204ENST00000552487 DNAJC5Q9H3Z4 198 aa20.61■□□□□ 0.89
ATF1-204ENST00000552487 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
ATF1-204ENST00000552487 WIZO95785 1651 aa20.54■□□□□ 0.88
ATF1-204ENST00000552487 RSF1Q96T23 1441 aaPredicted RBP20.47■□□□□ 0.87
ATF1-204ENST00000552487 THOC2Q8NI27 1593 aaKnown RBP20.44■□□□□ 0.86
ATF1-204ENST00000552487 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
ATF1-204ENST00000552487 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
ATF1-204ENST00000552487 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
ATF1-204ENST00000552487 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
ATF1-204ENST00000552487 FANCD2Q9BXW9 1451 aa20.33■□□□□ 0.85
ATF1-204ENST00000552487 CFTRP13569 1480 aa20.3■□□□□ 0.84
ATF1-204ENST00000552487 WDR62O43379 1518 aa20.26■□□□□ 0.83
ATF1-204ENST00000552487 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
ATF1-204ENST00000552487 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
ATF1-204ENST00000552487 PRDM2Q13029 1718 aa20■□□□□ 0.79
ATF1-204ENST00000552487 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
ATF1-204ENST00000552487 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
ATF1-204ENST00000552487 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
ATF1-204ENST00000552487 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
ATF1-204ENST00000552487 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
ATF1-204ENST00000552487 DNMBPQ6XZF7 1577 aa19.87■□□□□ 0.77
ATF1-204ENST00000552487 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
ATF1-204ENST00000552487 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
ATF1-204ENST00000552487 FBLN2P98095 1184 aa19.74■□□□□ 0.75
ATF1-204ENST00000552487 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
ATF1-204ENST00000552487 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
ATF1-204ENST00000552487 SOGA1O94964 1423 aa19.7■□□□□ 0.74
ATF1-204ENST00000552487 AQRO60306 1485 aaKnown RBP eCLIP19.68■□□□□ 0.74
ATF1-204ENST00000552487 TARBP1Q13395 1621 aaKnown RBP19.63■□□□□ 0.73
ATF1-204ENST00000552487 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
ATF1-204ENST00000552487 RAD54L2Q9Y4B4 1467 aa19.62■□□□□ 0.73
ATF1-204ENST00000552487 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
ATF1-204ENST00000552487 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.72
ATF1-204ENST00000552487 CUX1P39880 1505 aa19.57■□□□□ 0.72
ATF1-204ENST00000552487 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
ATF1-204ENST00000552487 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
ATF1-204ENST00000552487 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
ATF1-204ENST00000552487 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
ATF1-204ENST00000552487 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
ATF1-204ENST00000552487 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
ATF1-204ENST00000552487 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
ATF1-204ENST00000552487 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
ATF1-204ENST00000552487 CHD1O14646 1710 aa19.48■□□□□ 0.71
ATF1-204ENST00000552487 CYB5RLQ6IPT4 315 aa19.47■□□□□ 0.71
ATF1-204ENST00000552487 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
ATF1-204ENST00000552487 GAPVD1Q14C86 1478 aa19.46■□□□□ 0.71
ATF1-204ENST00000552487 SYNJ1O43426 1573 aa19.43■□□□□ 0.7
ATF1-204ENST00000552487 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
ATF1-204ENST00000552487 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
ATF1-204ENST00000552487 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
ATF1-204ENST00000552487 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
ATF1-204ENST00000552487 TOP2BQ02880 1626 aa19.31■□□□□ 0.68
ATF1-204ENST00000552487 ABCA5Q8WWZ7 1642 aa19.29■□□□□ 0.68
ATF1-204ENST00000552487 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
ATF1-204ENST00000552487 CLASP1Q7Z460 1538 aa19.28■□□□□ 0.68
ATF1-204ENST00000552487 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.68
ATF1-204ENST00000552487 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
ATF1-204ENST00000552487 GRIN2AQ12879 1464 aa19.22■□□□□ 0.67
ATF1-204ENST00000552487 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
ATF1-204ENST00000552487 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
ATF1-204ENST00000552487 NUP160Q12769 1436 aa19.11■□□□□ 0.65
ATF1-204ENST00000552487 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
ATF1-204ENST00000552487 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
ATF1-204ENST00000552487 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
ATF1-204ENST00000552487 PRG4Q92954 1404 aaPredicted RBP19■□□□□ 0.63
ATF1-204ENST00000552487 NPM1P06748 294 aaKnown RBP eCLIP18.98■□□□□ 0.63
ATF1-204ENST00000552487 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
ATF1-204ENST00000552487 IGF1RP08069 1367 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms