RNA–Protein interactions for RNA: ENST00000552200.1

PRICKLE1-208, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 4

Gene PRICKLE1, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-208ENST00000552200 NISCHQ9Y2I1 1504 aa38.84■■■■□ 3.81
PRICKLE1-208ENST00000552200 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
PRICKLE1-208ENST00000552200 ABCC9O60706 1549 aa33.63■■■□□ 2.97
PRICKLE1-208ENST00000552200 ZCCHC6Q5VYS8 1495 aaKnown RBP32.39■■■□□ 2.78
PRICKLE1-208ENST00000552200 NACADO15069 1562 aa32.37■■■□□ 2.77
PRICKLE1-208ENST00000552200 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
PRICKLE1-208ENST00000552200 MYO15BQ96JP2 1530 aa32.26■■■□□ 2.76
PRICKLE1-208ENST00000552200 DCAF8L2P0C7V8 631 aa32.18■■■□□ 2.74
PRICKLE1-208ENST00000552200 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
PRICKLE1-208ENST00000552200 UNC13AQ9UPW8 1703 aa31.78■■■□□ 2.68
PRICKLE1-208ENST00000552200 BICRAQ9NZM4 1560 aa31.55■■■□□ 2.64
PRICKLE1-208ENST00000552200 SCRIBQ14160 1630 aa31.44■■■□□ 2.62
PRICKLE1-208ENST00000552200 PABPN1Q86U42 306 aaKnown RBP eCLIP31.42■■■□□ 2.62
PRICKLE1-208ENST00000552200 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
PRICKLE1-208ENST00000552200 DNAJC5BQ9UF47 199 aa30.94■■■□□ 2.54
PRICKLE1-208ENST00000552200 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
PRICKLE1-208ENST00000552200 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
PRICKLE1-208ENST00000552200 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
PRICKLE1-208ENST00000552200 SMARCA4P51532 1647 aa30.12■■■□□ 2.41
PRICKLE1-208ENST00000552200 BAZ1AQ9NRL2 1556 aaPredicted RBP30.04■■■□□ 2.4
PRICKLE1-208ENST00000552200 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
PRICKLE1-208ENST00000552200 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
PRICKLE1-208ENST00000552200 NCAPD3P42695 1498 aa29.92■■■□□ 2.38
PRICKLE1-208ENST00000552200 PEG3Q9GZU2 1588 aa29.87■■■□□ 2.37
PRICKLE1-208ENST00000552200 SMARCA2P51531 1590 aa29.83■■■□□ 2.37
PRICKLE1-208ENST00000552200 HMGXB3Q12766 1538 aa29.76■■■□□ 2.36
PRICKLE1-208ENST00000552200 WIZO95785 1651 aa29.63■■■□□ 2.33
PRICKLE1-208ENST00000552200 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
PRICKLE1-208ENST00000552200 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
PRICKLE1-208ENST00000552200 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
PRICKLE1-208ENST00000552200 NESP48681 1621 aa29.19■■■□□ 2.26
PRICKLE1-208ENST00000552200 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
PRICKLE1-208ENST00000552200 CADPSQ9ULU8 1353 aa29■■■□□ 2.23
PRICKLE1-208ENST00000552200 CCDC88BA6NC98 1476 aa28.96■■■□□ 2.23
PRICKLE1-208ENST00000552200 CFTRP13569 1480 aa28.88■■■□□ 2.21
PRICKLE1-208ENST00000552200 ERCC6Q03468 1493 aa28.87■■■□□ 2.21
PRICKLE1-208ENST00000552200 KIF21AQ7Z4S6 1674 aa28.84■■■□□ 2.21
PRICKLE1-208ENST00000552200 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
PRICKLE1-208ENST00000552200 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.19
PRICKLE1-208ENST00000552200 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
PRICKLE1-208ENST00000552200 PRDM2Q13029 1718 aa28.67■■■□□ 2.18
PRICKLE1-208ENST00000552200 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
PRICKLE1-208ENST00000552200 CUX2O14529 1486 aa28.64■■■□□ 2.17
PRICKLE1-208ENST00000552200 CEP164Q9UPV0 1460 aa28.58■■■□□ 2.17
PRICKLE1-208ENST00000552200 MRC2Q9UBG0 1479 aa28.56■■■□□ 2.16
PRICKLE1-208ENST00000552200 WDR62O43379 1518 aa28.52■■■□□ 2.16
PRICKLE1-208ENST00000552200 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
PRICKLE1-208ENST00000552200 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
PRICKLE1-208ENST00000552200 DNMBPQ6XZF7 1577 aa28.2■■■□□ 2.11
PRICKLE1-208ENST00000552200 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
PRICKLE1-208ENST00000552200 DNAJC5Q9H3Z4 198 aa28.15■■■□□ 2.1
PRICKLE1-208ENST00000552200 CUX1P39880 1505 aa28.09■■■□□ 2.09
PRICKLE1-208ENST00000552200 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
PRICKLE1-208ENST00000552200 IFT140Q96RY7 1462 aa28■■■□□ 2.07
PRICKLE1-208ENST00000552200 TARBP1Q13395 1621 aaKnown RBP27.99■■■□□ 2.07
PRICKLE1-208ENST00000552200 ZNF608Q9ULD9 1512 aaPredicted RBP27.94■■■□□ 2.06
PRICKLE1-208ENST00000552200 FGD5Q6ZNL6 1462 aa27.94■■■□□ 2.06
PRICKLE1-208ENST00000552200 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.06
PRICKLE1-208ENST00000552200 SYNJ1O43426 1573 aa27.87■■■□□ 2.05
PRICKLE1-208ENST00000552200 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
PRICKLE1-208ENST00000552200 WRNQ14191 1432 aaPredicted RBP eCLIP27.85■■■□□ 2.05
PRICKLE1-208ENST00000552200 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
PRICKLE1-208ENST00000552200 SOGA1O94964 1423 aa27.84■■■□□ 2.05
PRICKLE1-208ENST00000552200 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
PRICKLE1-208ENST00000552200 WDR97A6NE52 1622 aa27.79■■■□□ 2.04
PRICKLE1-208ENST00000552200 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.03
PRICKLE1-208ENST00000552200 ABCA10Q8WWZ4 1543 aa27.69■■■□□ 2.02
PRICKLE1-208ENST00000552200 TDRD9Q8NDG6 1382 aaKnown RBP27.69■■■□□ 2.02
PRICKLE1-208ENST00000552200 ABCA5Q8WWZ7 1642 aa27.6■■■□□ 2.01
PRICKLE1-208ENST00000552200 GAPVD1Q14C86 1478 aa27.52■■■□□ 2
PRICKLE1-208ENST00000552200 PBRM1Q86U86 1689 aa27.51■■□□□ 1.99
PRICKLE1-208ENST00000552200 GRIN2BQ13224 1484 aa27.51■■□□□ 1.99
PRICKLE1-208ENST00000552200 SNAPC4Q5SXM2 1469 aa27.48■■□□□ 1.99
PRICKLE1-208ENST00000552200 CHD1O14646 1710 aa27.46■■□□□ 1.99
PRICKLE1-208ENST00000552200 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
PRICKLE1-208ENST00000552200 OSCARQ8IYS5 282 aa27.39■■□□□ 1.98
PRICKLE1-208ENST00000552200 SYNJ2O15056 1496 aa27.33■■□□□ 1.97
PRICKLE1-208ENST00000552200 ERICH3Q5RHP9 1530 aa27.33■■□□□ 1.97
PRICKLE1-208ENST00000552200 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
PRICKLE1-208ENST00000552200 FBLN2P98095 1184 aa27.24■■□□□ 1.95
PRICKLE1-208ENST00000552200 KIF27Q86VH2 1401 aa27.22■■□□□ 1.95
PRICKLE1-208ENST00000552200 CHMP7Q8WUX9 453 aaPredicted RBP27.21■■□□□ 1.95
PRICKLE1-208ENST00000552200 FHAD1B1AJZ9 1412 aa27.21■■□□□ 1.95
PRICKLE1-208ENST00000552200 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
PRICKLE1-208ENST00000552200 IGF1RP08069 1367 aa27.2■■□□□ 1.94
PRICKLE1-208ENST00000552200 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
PRICKLE1-208ENST00000552200 RUSC2Q8N2Y8 1516 aa27.15■■□□□ 1.94
PRICKLE1-208ENST00000552200 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
PRICKLE1-208ENST00000552200 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
PRICKLE1-208ENST00000552200 NUP160Q12769 1436 aa27.1■■□□□ 1.93
PRICKLE1-208ENST00000552200 RIMBP3CA6NJZ7 1639 aa27.07■■□□□ 1.92
PRICKLE1-208ENST00000552200 RIMBP3BA6NNM3 1639 aa27.07■■□□□ 1.92
PRICKLE1-208ENST00000552200 RIMBP3Q9UFD9 1639 aa27.07■■□□□ 1.92
PRICKLE1-208ENST00000552200 CUL7Q14999 1698 aa27.07■■□□□ 1.92
PRICKLE1-208ENST00000552200 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
PRICKLE1-208ENST00000552200 CHIC1Q5VXU3 224 aa26.98■■□□□ 1.91
PRICKLE1-208ENST00000552200 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
PRICKLE1-208ENST00000552200 SHROOM2Q13796 1616 aa26.93■■□□□ 1.9
PRICKLE1-208ENST00000552200 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
PRICKLE1-208ENST00000552200 ERCC6L2Q5T890 1561 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms