RNA–Protein interactions for RNA: ENST00000552132.5

ERGIC2-210, Transcript of ERGIC and golgi 2, humanhuman

TSL 3

Gene ERGIC2, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-210ENST00000552132 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
ERGIC2-210ENST00000552132 AEBP2Q6ZN18 517 aaPredicted RBP26.26■■□□□ 1.79
ERGIC2-210ENST00000552132 ABCC9O60706 1549 aa25.82■■□□□ 1.72
ERGIC2-210ENST00000552132 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
ERGIC2-210ENST00000552132 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
ERGIC2-210ENST00000552132 RB1CC1Q8TDY2 1594 aa24.49■■□□□ 1.51
ERGIC2-210ENST00000552132 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
ERGIC2-210ENST00000552132 NACADO15069 1562 aa24.28■■□□□ 1.48
ERGIC2-210ENST00000552132 DCAF8L2P0C7V8 631 aa24.25■■□□□ 1.47
ERGIC2-210ENST00000552132 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
ERGIC2-210ENST00000552132 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
ERGIC2-210ENST00000552132 UNC13AQ9UPW8 1703 aa23.75■■□□□ 1.39
ERGIC2-210ENST00000552132 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
ERGIC2-210ENST00000552132 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
ERGIC2-210ENST00000552132 SHROOM4Q9ULL8 1493 aa23.47■■□□□ 1.35
ERGIC2-210ENST00000552132 DCAF1Q9Y4B6 1507 aa23.47■■□□□ 1.35
ERGIC2-210ENST00000552132 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
ERGIC2-210ENST00000552132 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
ERGIC2-210ENST00000552132 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
ERGIC2-210ENST00000552132 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
ERGIC2-210ENST00000552132 DNAJC5Q9H3Z4 198 aa22.65■■□□□ 1.22
ERGIC2-210ENST00000552132 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
ERGIC2-210ENST00000552132 NCAPD3P42695 1498 aa22.42■■□□□ 1.18
ERGIC2-210ENST00000552132 ERCC6Q03468 1493 aa22.38■■□□□ 1.17
ERGIC2-210ENST00000552132 CUX2O14529 1486 aa22.37■■□□□ 1.17
ERGIC2-210ENST00000552132 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
ERGIC2-210ENST00000552132 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
ERGIC2-210ENST00000552132 HMGXB3Q12766 1538 aa22.19■■□□□ 1.14
ERGIC2-210ENST00000552132 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
ERGIC2-210ENST00000552132 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
ERGIC2-210ENST00000552132 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
ERGIC2-210ENST00000552132 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
ERGIC2-210ENST00000552132 NESP48681 1621 aa22.07■■□□□ 1.12
ERGIC2-210ENST00000552132 PEG3Q9GZU2 1588 aa21.97■■□□□ 1.11
ERGIC2-210ENST00000552132 LAMC3Q9Y6N6 1575 aa21.93■■□□□ 1.1
ERGIC2-210ENST00000552132 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
ERGIC2-210ENST00000552132 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
ERGIC2-210ENST00000552132 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
ERGIC2-210ENST00000552132 CADPSQ9ULU8 1353 aa21.76■■□□□ 1.07
ERGIC2-210ENST00000552132 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
ERGIC2-210ENST00000552132 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
ERGIC2-210ENST00000552132 TRIM41Q8WV44 630 aa21.59■■□□□ 1.05
ERGIC2-210ENST00000552132 WDR62O43379 1518 aa21.56■■□□□ 1.04
ERGIC2-210ENST00000552132 WIZO95785 1651 aa21.55■■□□□ 1.04
ERGIC2-210ENST00000552132 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
ERGIC2-210ENST00000552132 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
ERGIC2-210ENST00000552132 CFTRP13569 1480 aa21.43■■□□□ 1.02
ERGIC2-210ENST00000552132 OSCARQ8IYS5 282 aa21.41■■□□□ 1.02
ERGIC2-210ENST00000552132 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
ERGIC2-210ENST00000552132 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
ERGIC2-210ENST00000552132 URB2Q14146 1524 aaKnown RBP21.27■■□□□ 1
ERGIC2-210ENST00000552132 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
ERGIC2-210ENST00000552132 CCDC88BA6NC98 1476 aa21.1■□□□□ 0.97
ERGIC2-210ENST00000552132 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
ERGIC2-210ENST00000552132 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
ERGIC2-210ENST00000552132 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
ERGIC2-210ENST00000552132 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
ERGIC2-210ENST00000552132 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
ERGIC2-210ENST00000552132 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
ERGIC2-210ENST00000552132 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
ERGIC2-210ENST00000552132 FOXD1Q16676 465 aa20.94■□□□□ 0.94
ERGIC2-210ENST00000552132 ARHGEF11O15085 1522 aa20.94■□□□□ 0.94
ERGIC2-210ENST00000552132 DNMBPQ6XZF7 1577 aa20.92■□□□□ 0.94
ERGIC2-210ENST00000552132 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
ERGIC2-210ENST00000552132 FBLN2P98095 1184 aa20.89■□□□□ 0.93
ERGIC2-210ENST00000552132 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
ERGIC2-210ENST00000552132 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.931e-6■■■□□ 18.1
ERGIC2-210ENST00000552132 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
ERGIC2-210ENST00000552132 POLA1P09884 1462 aaPredicted RBP20.8■□□□□ 0.92
ERGIC2-210ENST00000552132 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
ERGIC2-210ENST00000552132 SOGA1O94964 1423 aa20.77■□□□□ 0.91
ERGIC2-210ENST00000552132 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
ERGIC2-210ENST00000552132 CHD1O14646 1710 aa20.73■□□□□ 0.91
ERGIC2-210ENST00000552132 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
ERGIC2-210ENST00000552132 CHMP7Q8WUX9 453 aaPredicted RBP20.71■□□□□ 0.91
ERGIC2-210ENST00000552132 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
ERGIC2-210ENST00000552132 WDR97A6NE52 1622 aa20.64■□□□□ 0.9
ERGIC2-210ENST00000552132 SNAPC4Q5SXM2 1469 aa20.63■□□□□ 0.89
ERGIC2-210ENST00000552132 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
ERGIC2-210ENST00000552132 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
ERGIC2-210ENST00000552132 GRIN2BQ13224 1484 aa20.6■□□□□ 0.89
ERGIC2-210ENST00000552132 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
ERGIC2-210ENST00000552132 CUX1P39880 1505 aa20.55■□□□□ 0.88
ERGIC2-210ENST00000552132 CLASP1Q7Z460 1538 aa20.54■□□□□ 0.88
ERGIC2-210ENST00000552132 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
ERGIC2-210ENST00000552132 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
ERGIC2-210ENST00000552132 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
ERGIC2-210ENST00000552132 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
ERGIC2-210ENST00000552132 PBRM1Q86U86 1689 aa20.37■□□□□ 0.85
ERGIC2-210ENST00000552132 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
ERGIC2-210ENST00000552132 ABCA5Q8WWZ7 1642 aa20.32■□□□□ 0.84
ERGIC2-210ENST00000552132 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
ERGIC2-210ENST00000552132 FHAD1B1AJZ9 1412 aa20.24■□□□□ 0.83
ERGIC2-210ENST00000552132 NUP160Q12769 1436 aa20.23■□□□□ 0.83
ERGIC2-210ENST00000552132 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
ERGIC2-210ENST00000552132 CEP170Q5SW79 1584 aa20.18■□□□□ 0.82
ERGIC2-210ENST00000552132 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
ERGIC2-210ENST00000552132 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
ERGIC2-210ENST00000552132 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
ERGIC2-210ENST00000552132 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms