RNA–Protein interactions for RNA: ENST00000552001.1

SLC4A8-216, Transcript of solute carrier family 4 member 8, humanhuman

TSL 3

Gene SLC4A8, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A8-216ENST00000552001 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.07
SLC4A8-216ENST00000552001 CCDC180Q9P1Z9 1646 aa30.64■■■□□ 2.5
SLC4A8-216ENST00000552001 ABCC9O60706 1549 aa29.57■■■□□ 2.32
SLC4A8-216ENST00000552001 RB1CC1Q8TDY2 1594 aa28.66■■■□□ 2.18
SLC4A8-216ENST00000552001 NACADO15069 1562 aa28.63■■■□□ 2.17
SLC4A8-216ENST00000552001 ZCCHC6Q5VYS8 1495 aaKnown RBP28.53■■■□□ 2.16
SLC4A8-216ENST00000552001 MYO15BQ96JP2 1530 aa28.51■■■□□ 2.15
SLC4A8-216ENST00000552001 DCAF1Q9Y4B6 1507 aa28.4■■■□□ 2.14
SLC4A8-216ENST00000552001 UNC13AQ9UPW8 1703 aa28.27■■■□□ 2.12
SLC4A8-216ENST00000552001 DCAF8L2P0C7V8 631 aa28.21■■■□□ 2.11
SLC4A8-216ENST00000552001 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
SLC4A8-216ENST00000552001 SCRIBQ14160 1630 aa27.75■■■□□ 2.03
SLC4A8-216ENST00000552001 SHROOM4Q9ULL8 1493 aa27.56■■■□□ 2
SLC4A8-216ENST00000552001 PABPN1Q86U42 306 aaKnown RBP eCLIP27.48■■□□□ 1.99
SLC4A8-216ENST00000552001 EIF4G1Q04637 1599 aaKnown RBP27.02■■□□□ 1.92
SLC4A8-216ENST00000552001 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
SLC4A8-216ENST00000552001 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
SLC4A8-216ENST00000552001 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
SLC4A8-216ENST00000552001 CECR2Q9BXF3 1484 aa26.59■■□□□ 1.85
SLC4A8-216ENST00000552001 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
SLC4A8-216ENST00000552001 SMARCA2P51531 1590 aa26.4■■□□□ 1.82
SLC4A8-216ENST00000552001 PEG3Q9GZU2 1588 aa26.4■■□□□ 1.82
SLC4A8-216ENST00000552001 ATAD2BQ9ULI0 1458 aa26.33■■□□□ 1.81
SLC4A8-216ENST00000552001 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.8
SLC4A8-216ENST00000552001 NCAPD3P42695 1498 aa26.32■■□□□ 1.8
SLC4A8-216ENST00000552001 HMGXB3Q12766 1538 aa26.32■■□□□ 1.8
SLC4A8-216ENST00000552001 WIZO95785 1651 aa26.15■■□□□ 1.78
SLC4A8-216ENST00000552001 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
SLC4A8-216ENST00000552001 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
SLC4A8-216ENST00000552001 TOP2AP11388 1531 aaKnown RBP25.85■■□□□ 1.73
SLC4A8-216ENST00000552001 LAMC3Q9Y6N6 1575 aa25.75■■□□□ 1.71
SLC4A8-216ENST00000552001 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
SLC4A8-216ENST00000552001 NESP48681 1621 aa25.63■■□□□ 1.69
SLC4A8-216ENST00000552001 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
SLC4A8-216ENST00000552001 ERCC6Q03468 1493 aa25.5■■□□□ 1.67
SLC4A8-216ENST00000552001 CADPSQ9ULU8 1353 aa25.48■■□□□ 1.67
SLC4A8-216ENST00000552001 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
SLC4A8-216ENST00000552001 CCDC88BA6NC98 1476 aa25.43■■□□□ 1.66
SLC4A8-216ENST00000552001 CFTRP13569 1480 aa25.41■■□□□ 1.66
SLC4A8-216ENST00000552001 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
SLC4A8-216ENST00000552001 CUX2O14529 1486 aa25.32■■□□□ 1.64
SLC4A8-216ENST00000552001 FANCD2Q9BXW9 1451 aa25.24■■□□□ 1.63
SLC4A8-216ENST00000552001 CEP164Q9UPV0 1460 aa25.24■■□□□ 1.63
SLC4A8-216ENST00000552001 MRC2Q9UBG0 1479 aa25.19■■□□□ 1.62
SLC4A8-216ENST00000552001 WDR62O43379 1518 aa25.18■■□□□ 1.62
SLC4A8-216ENST00000552001 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
SLC4A8-216ENST00000552001 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
SLC4A8-216ENST00000552001 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
SLC4A8-216ENST00000552001 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
SLC4A8-216ENST00000552001 TOPBP1Q92547 1522 aa24.88■■□□□ 1.57
SLC4A8-216ENST00000552001 CUX1P39880 1505 aa24.72■■□□□ 1.55
SLC4A8-216ENST00000552001 TARBP1Q13395 1621 aaKnown RBP24.72■■□□□ 1.55
SLC4A8-216ENST00000552001 IFT140Q96RY7 1462 aa24.7■■□□□ 1.54
SLC4A8-216ENST00000552001 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
SLC4A8-216ENST00000552001 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
SLC4A8-216ENST00000552001 WDR97A6NE52 1622 aa24.65■■□□□ 1.54
SLC4A8-216ENST00000552001 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
SLC4A8-216ENST00000552001 TOP2BQ02880 1626 aa24.61■■□□□ 1.53
SLC4A8-216ENST00000552001 FGD5Q6ZNL6 1462 aa24.59■■□□□ 1.53
SLC4A8-216ENST00000552001 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
SLC4A8-216ENST00000552001 ZNF608Q9ULD9 1512 aaPredicted RBP24.53■■□□□ 1.52
SLC4A8-216ENST00000552001 WRNQ14191 1432 aaPredicted RBP eCLIP24.51■■□□□ 1.51
SLC4A8-216ENST00000552001 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
SLC4A8-216ENST00000552001 SOGA1O94964 1423 aa24.47■■□□□ 1.51
SLC4A8-216ENST00000552001 PBRM1Q86U86 1689 aa24.46■■□□□ 1.51
SLC4A8-216ENST00000552001 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
SLC4A8-216ENST00000552001 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
SLC4A8-216ENST00000552001 CHD1O14646 1710 aa24.39■■□□□ 1.5
SLC4A8-216ENST00000552001 AQRO60306 1485 aaKnown RBP eCLIP24.35■■□□□ 1.49
SLC4A8-216ENST00000552001 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
SLC4A8-216ENST00000552001 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
SLC4A8-216ENST00000552001 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
SLC4A8-216ENST00000552001 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
SLC4A8-216ENST00000552001 MAGI1Q96QZ7 1491 aaPredicted RBP24.24■■□□□ 1.47
SLC4A8-216ENST00000552001 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.47
SLC4A8-216ENST00000552001 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
SLC4A8-216ENST00000552001 ADAMTS12P58397 1594 aa24.14■■□□□ 1.45
SLC4A8-216ENST00000552001 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
SLC4A8-216ENST00000552001 OSCARQ8IYS5 282 aa24.07■■□□□ 1.44
SLC4A8-216ENST00000552001 CUL7Q14999 1698 aa24.05■■□□□ 1.44
SLC4A8-216ENST00000552001 CLASP1Q7Z460 1538 aa24■■□□□ 1.43
SLC4A8-216ENST00000552001 KIF27Q86VH2 1401 aa23.99■■□□□ 1.43
SLC4A8-216ENST00000552001 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
SLC4A8-216ENST00000552001 FHAD1B1AJZ9 1412 aa23.96■■□□□ 1.43
SLC4A8-216ENST00000552001 RIMBP3CA6NJZ7 1639 aa23.94■■□□□ 1.42
SLC4A8-216ENST00000552001 RIMBP3BA6NNM3 1639 aa23.94■■□□□ 1.42
SLC4A8-216ENST00000552001 RIMBP3Q9UFD9 1639 aa23.94■■□□□ 1.42
SLC4A8-216ENST00000552001 FBLN2P98095 1184 aa23.92■■□□□ 1.42
SLC4A8-216ENST00000552001 CHMP7Q8WUX9 453 aaPredicted RBP23.92■■□□□ 1.42
SLC4A8-216ENST00000552001 CEP170Q5SW79 1584 aa23.9■■□□□ 1.42
SLC4A8-216ENST00000552001 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
SLC4A8-216ENST00000552001 NUP160Q12769 1436 aa23.84■■□□□ 1.41
SLC4A8-216ENST00000552001 IGF1RP08069 1367 aa23.83■■□□□ 1.41
SLC4A8-216ENST00000552001 SHROOM2Q13796 1616 aa23.83■■□□□ 1.41
SLC4A8-216ENST00000552001 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
SLC4A8-216ENST00000552001 RUSC2Q8N2Y8 1516 aa23.8■■□□□ 1.4
SLC4A8-216ENST00000552001 CTTNBP2Q8WZ74 1663 aa23.71■■□□□ 1.39
SLC4A8-216ENST00000552001 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
SLC4A8-216ENST00000552001 ARAP1Q96P48 1450 aa23.64■■□□□ 1.38
SLC4A8-216ENST00000552001 RAPGEF2Q9Y4G8 1499 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms