RNA–Protein interactions for RNA: ENST00000551705.1

TMEM106C-217, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 666 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-217ENST00000551705 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
TMEM106C-217ENST00000551705 ABCC9O60706 1549 aa32.45■■■□□ 2.78
TMEM106C-217ENST00000551705 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
TMEM106C-217ENST00000551705 DNAJC5BQ9UF47 199 aa31.11■■■□□ 2.57
TMEM106C-217ENST00000551705 RB1CC1Q8TDY2 1594 aa30.49■■■□□ 2.47
TMEM106C-217ENST00000551705 NACADO15069 1562 aa30.06■■■□□ 2.4
TMEM106C-217ENST00000551705 UNC13AQ9UPW8 1703 aa30.04■■■□□ 2.4
TMEM106C-217ENST00000551705 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.39
TMEM106C-217ENST00000551705 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
TMEM106C-217ENST00000551705 DCAF8L2P0C7V8 631 aa29.59■■■□□ 2.33
TMEM106C-217ENST00000551705 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
TMEM106C-217ENST00000551705 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
TMEM106C-217ENST00000551705 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
TMEM106C-217ENST00000551705 SHROOM4Q9ULL8 1493 aa29.11■■■□□ 2.25
TMEM106C-217ENST00000551705 DNAJC5Q9H3Z4 198 aa29.08■■■□□ 2.25
TMEM106C-217ENST00000551705 EIF4G1Q04637 1599 aaKnown RBP29.03■■■□□ 2.24
TMEM106C-217ENST00000551705 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
TMEM106C-217ENST00000551705 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
TMEM106C-217ENST00000551705 DCAF1Q9Y4B6 1507 aa28.67■■■□□ 2.18
TMEM106C-217ENST00000551705 CUX2O14529 1486 aa28.25■■■□□ 2.11
TMEM106C-217ENST00000551705 ERCC6Q03468 1493 aa28.02■■■□□ 2.08
TMEM106C-217ENST00000551705 NCAPD3P42695 1498 aa27.7■■■□□ 2.03
TMEM106C-217ENST00000551705 NESP48681 1621 aa27.67■■■□□ 2.02
TMEM106C-217ENST00000551705 THOC2Q8NI27 1593 aaKnown RBP27.63■■■□□ 2.01
TMEM106C-217ENST00000551705 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
TMEM106C-217ENST00000551705 HMGXB3Q12766 1538 aa27.52■■■□□ 2
TMEM106C-217ENST00000551705 TRIM41Q8WV44 630 aa27.52■■■□□ 2
TMEM106C-217ENST00000551705 SMARCA2P51531 1590 aa27.44■■□□□ 1.98
TMEM106C-217ENST00000551705 SMARCA4P51532 1647 aa27.42■■□□□ 1.98
TMEM106C-217ENST00000551705 KIF21AQ7Z4S6 1674 aa27.4■■□□□ 1.98
TMEM106C-217ENST00000551705 LAMC3Q9Y6N6 1575 aa27.3■■□□□ 1.96
TMEM106C-217ENST00000551705 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
TMEM106C-217ENST00000551705 AEBP2Q6ZN18 517 aaPredicted RBP27.21■■□□□ 1.95
TMEM106C-217ENST00000551705 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
TMEM106C-217ENST00000551705 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
TMEM106C-217ENST00000551705 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
TMEM106C-217ENST00000551705 WDR62O43379 1518 aa26.99■■□□□ 1.91
TMEM106C-217ENST00000551705 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
TMEM106C-217ENST00000551705 MROH2BQ7Z745 1585 aa26.86■■□□□ 1.89
TMEM106C-217ENST00000551705 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
TMEM106C-217ENST00000551705 CEP164Q9UPV0 1460 aa26.7■■□□□ 1.87
TMEM106C-217ENST00000551705 RIMBP3CA6NJZ7 1639 aa26.69■■□□□ 1.86
TMEM106C-217ENST00000551705 RIMBP3BA6NNM3 1639 aa26.69■■□□□ 1.86
TMEM106C-217ENST00000551705 RIMBP3Q9UFD9 1639 aa26.69■■□□□ 1.86
TMEM106C-217ENST00000551705 OSCARQ8IYS5 282 aa26.68■■□□□ 1.86
TMEM106C-217ENST00000551705 FANCD2Q9BXW9 1451 aa26.58■■□□□ 1.85
TMEM106C-217ENST00000551705 WIZO95785 1651 aa26.56■■□□□ 1.84
TMEM106C-217ENST00000551705 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
TMEM106C-217ENST00000551705 ARHGEF11O15085 1522 aa26.46■■□□□ 1.83
TMEM106C-217ENST00000551705 CFTRP13569 1480 aa26.37■■□□□ 1.81
TMEM106C-217ENST00000551705 ZNF608Q9ULD9 1512 aaPredicted RBP26.28■■□□□ 1.8
TMEM106C-217ENST00000551705 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
TMEM106C-217ENST00000551705 CHD1O14646 1710 aa26.19■■□□□ 1.78
TMEM106C-217ENST00000551705 EIF4G3O43432 1585 aaKnown RBP26.17■■□□□ 1.78
TMEM106C-217ENST00000551705 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
TMEM106C-217ENST00000551705 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
TMEM106C-217ENST00000551705 IFT140Q96RY7 1462 aa26.16■■□□□ 1.78
TMEM106C-217ENST00000551705 TRHP20396 242 aaPredicted RBP26.13■■□□□ 1.77
TMEM106C-217ENST00000551705 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
TMEM106C-217ENST00000551705 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
TMEM106C-217ENST00000551705 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
TMEM106C-217ENST00000551705 TARBP1Q13395 1621 aaKnown RBP25.91■■□□□ 1.74
TMEM106C-217ENST00000551705 AQRO60306 1485 aaKnown RBP eCLIP25.87■■□□□ 1.73
TMEM106C-217ENST00000551705 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
TMEM106C-217ENST00000551705 FBLN2P98095 1184 aa25.78■■□□□ 1.72
TMEM106C-217ENST00000551705 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
TMEM106C-217ENST00000551705 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
TMEM106C-217ENST00000551705 CCDC88BA6NC98 1476 aa25.76■■□□□ 1.71
TMEM106C-217ENST00000551705 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
TMEM106C-217ENST00000551705 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
TMEM106C-217ENST00000551705 SNAPC4Q5SXM2 1469 aa25.64■■□□□ 1.69
TMEM106C-217ENST00000551705 SYNJ1O43426 1573 aa25.63■■□□□ 1.69
TMEM106C-217ENST00000551705 RAD54L2Q9Y4B4 1467 aa25.61■■□□□ 1.69
TMEM106C-217ENST00000551705 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
TMEM106C-217ENST00000551705 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
TMEM106C-217ENST00000551705 MAGI1Q96QZ7 1491 aaPredicted RBP25.48■■□□□ 1.67
TMEM106C-217ENST00000551705 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
TMEM106C-217ENST00000551705 SOGA1O94964 1423 aa25.46■■□□□ 1.67
TMEM106C-217ENST00000551705 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
TMEM106C-217ENST00000551705 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
TMEM106C-217ENST00000551705 CHMP7Q8WUX9 453 aaPredicted RBP25.42■■□□□ 1.66
TMEM106C-217ENST00000551705 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
TMEM106C-217ENST00000551705 GRIN2BQ13224 1484 aa25.38■■□□□ 1.65
TMEM106C-217ENST00000551705 ERCC6L2Q5T890 1561 aa25.35■■□□□ 1.65
TMEM106C-217ENST00000551705 KIF13AQ9H1H9 1805 aa25.33■■□□□ 1.64
TMEM106C-217ENST00000551705 CUX1P39880 1505 aa25.29■■□□□ 1.64
TMEM106C-217ENST00000551705 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
TMEM106C-217ENST00000551705 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
TMEM106C-217ENST00000551705 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
TMEM106C-217ENST00000551705 GRIN2AQ12879 1464 aa25.1■■□□□ 1.61
TMEM106C-217ENST00000551705 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
TMEM106C-217ENST00000551705 ABCA10Q8WWZ4 1543 aa25.05■■□□□ 1.6
TMEM106C-217ENST00000551705 NUP160Q12769 1436 aa25.03■■□□□ 1.6
TMEM106C-217ENST00000551705 ILDR1Q86SU0 546 aaPredicted RBP25.01■■□□□ 1.59
TMEM106C-217ENST00000551705 DIP2BQ9P265 1576 aa24.92■■□□□ 1.58
TMEM106C-217ENST00000551705 KDM6BO15054 1643 aa24.9■■□□□ 1.58
TMEM106C-217ENST00000551705 KDM4FA0A1W2PPD8 638 aa24.9■■□□□ 1.58
TMEM106C-217ENST00000551705 ABCC10Q5T3U5 1492 aa24.89■■□□□ 1.58
TMEM106C-217ENST00000551705 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
TMEM106C-217ENST00000551705 MAPKBP1O60336 1514 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms