RNA–Protein interactions for RNA: ENST00000551535.1

LMBR1L-221, Transcript of limb development membrane protein 1 like, humanhuman

TSL 2

Gene LMBR1L, Length 874 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-221ENST00000551535 NISCHQ9Y2I1 1504 aa37.36■■■■□ 3.57
LMBR1L-221ENST00000551535 ABCC9O60706 1549 aa34.27■■■■□ 3.08
LMBR1L-221ENST00000551535 CCDC180Q9P1Z9 1646 aa33.79■■■■□ 3
LMBR1L-221ENST00000551535 DNAJC5BQ9UF47 199 aa32.57■■■□□ 2.8
LMBR1L-221ENST00000551535 RB1CC1Q8TDY2 1594 aa32.46■■■□□ 2.79
LMBR1L-221ENST00000551535 NACADO15069 1562 aa32.11■■■□□ 2.73
LMBR1L-221ENST00000551535 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
LMBR1L-221ENST00000551535 PABPN1Q86U42 306 aaKnown RBP eCLIP31.81■■■□□ 2.68
LMBR1L-221ENST00000551535 UNC13AQ9UPW8 1703 aa31.6■■■□□ 2.65
LMBR1L-221ENST00000551535 MYO15BQ96JP2 1530 aa31.5■■■□□ 2.63
LMBR1L-221ENST00000551535 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
LMBR1L-221ENST00000551535 SHROOM4Q9ULL8 1493 aa31.12■■■□□ 2.57
LMBR1L-221ENST00000551535 CECR2Q9BXF3 1484 aa30.98■■■□□ 2.55
LMBR1L-221ENST00000551535 CC2D2AQ9P2K1 1620 aa30.95■■■□□ 2.54
LMBR1L-221ENST00000551535 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
LMBR1L-221ENST00000551535 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
LMBR1L-221ENST00000551535 EIF4G1Q04637 1599 aaKnown RBP30.75■■■□□ 2.51
LMBR1L-221ENST00000551535 SCRIBQ14160 1630 aa30.69■■■□□ 2.5
LMBR1L-221ENST00000551535 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
LMBR1L-221ENST00000551535 CUX2O14529 1486 aa29.86■■■□□ 2.37
LMBR1L-221ENST00000551535 ERCC6Q03468 1493 aa29.72■■■□□ 2.35
LMBR1L-221ENST00000551535 NCAPD3P42695 1498 aa29.63■■■□□ 2.33
LMBR1L-221ENST00000551535 ATAD2BQ9ULI0 1458 aa29.43■■■□□ 2.3
LMBR1L-221ENST00000551535 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
LMBR1L-221ENST00000551535 HMGXB3Q12766 1538 aa29.36■■■□□ 2.29
LMBR1L-221ENST00000551535 SMARCA4P51532 1647 aa29.25■■■□□ 2.27
LMBR1L-221ENST00000551535 NESP48681 1621 aa29.24■■■□□ 2.27
LMBR1L-221ENST00000551535 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
LMBR1L-221ENST00000551535 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
LMBR1L-221ENST00000551535 BAZ1AQ9NRL2 1556 aaPredicted RBP29.08■■■□□ 2.25
LMBR1L-221ENST00000551535 LAMC3Q9Y6N6 1575 aa29.06■■■□□ 2.24
LMBR1L-221ENST00000551535 PEG3Q9GZU2 1588 aa29■■■□□ 2.23
LMBR1L-221ENST00000551535 PDS5BQ9NTI5 1447 aa28.95■■■□□ 2.23
LMBR1L-221ENST00000551535 KIF21AQ7Z4S6 1674 aa28.86■■■□□ 2.21
LMBR1L-221ENST00000551535 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
LMBR1L-221ENST00000551535 MROH2BQ7Z745 1585 aa28.72■■■□□ 2.19
LMBR1L-221ENST00000551535 CADPSQ9ULU8 1353 aa28.71■■■□□ 2.19
LMBR1L-221ENST00000551535 MRC2Q9UBG0 1479 aa28.68■■■□□ 2.18
LMBR1L-221ENST00000551535 WDR62O43379 1518 aa28.61■■■□□ 2.17
LMBR1L-221ENST00000551535 CEP164Q9UPV0 1460 aa28.47■■■□□ 2.15
LMBR1L-221ENST00000551535 OSCARQ8IYS5 282 aa28.42■■■□□ 2.14
LMBR1L-221ENST00000551535 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
LMBR1L-221ENST00000551535 WIZO95785 1651 aa28.35■■■□□ 2.13
LMBR1L-221ENST00000551535 CFTRP13569 1480 aa28.25■■■□□ 2.11
LMBR1L-221ENST00000551535 URB2Q14146 1524 aaKnown RBP28.12■■■□□ 2.09
LMBR1L-221ENST00000551535 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
LMBR1L-221ENST00000551535 RIMBP3CA6NJZ7 1639 aa28.01■■■□□ 2.07
LMBR1L-221ENST00000551535 RIMBP3BA6NNM3 1639 aa28.01■■■□□ 2.07
LMBR1L-221ENST00000551535 RIMBP3Q9UFD9 1639 aa28.01■■■□□ 2.07
LMBR1L-221ENST00000551535 RSF1Q96T23 1441 aaPredicted RBP27.96■■■□□ 2.07
LMBR1L-221ENST00000551535 IFT140Q96RY7 1462 aa27.94■■■□□ 2.06
LMBR1L-221ENST00000551535 PRDM2Q13029 1718 aa27.91■■■□□ 2.06
LMBR1L-221ENST00000551535 ARHGEF11O15085 1522 aa27.89■■■□□ 2.06
LMBR1L-221ENST00000551535 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
LMBR1L-221ENST00000551535 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
LMBR1L-221ENST00000551535 CYB5RLQ6IPT4 315 aa27.75■■■□□ 2.03
LMBR1L-221ENST00000551535 TOPBP1Q92547 1522 aa27.75■■■□□ 2.03
LMBR1L-221ENST00000551535 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
LMBR1L-221ENST00000551535 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
LMBR1L-221ENST00000551535 TRHP20396 242 aaPredicted RBP27.66■■■□□ 2.02
LMBR1L-221ENST00000551535 DNMBPQ6XZF7 1577 aa27.61■■■□□ 2.01
LMBR1L-221ENST00000551535 CHD1O14646 1710 aa27.58■■■□□ 2.01
LMBR1L-221ENST00000551535 FBLN2P98095 1184 aa27.55■■■□□ 2
LMBR1L-221ENST00000551535 AQRO60306 1485 aaKnown RBP eCLIP27.55■■■□□ 28e-9■■■■■ 58.8
LMBR1L-221ENST00000551535 ARAP1Q96P48 1450 aa27.55■■■□□ 2
LMBR1L-221ENST00000551535 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
LMBR1L-221ENST00000551535 POLA1P09884 1462 aaPredicted RBP27.43■■□□□ 1.98
LMBR1L-221ENST00000551535 SOGA1O94964 1423 aa27.33■■□□□ 1.96
LMBR1L-221ENST00000551535 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
LMBR1L-221ENST00000551535 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
LMBR1L-221ENST00000551535 TDRD9Q8NDG6 1382 aaKnown RBP27.31■■□□□ 1.96
LMBR1L-221ENST00000551535 RAD54L2Q9Y4B4 1467 aa27.3■■□□□ 1.96
LMBR1L-221ENST00000551535 CHMP7Q8WUX9 453 aaPredicted RBP27.29■■□□□ 1.96
LMBR1L-221ENST00000551535 SYNJ1O43426 1573 aa27.28■■□□□ 1.96
LMBR1L-221ENST00000551535 SNAPC4Q5SXM2 1469 aa27.27■■□□□ 1.96
LMBR1L-221ENST00000551535 CLASP1Q7Z460 1538 aa27.26■■□□□ 1.96
LMBR1L-221ENST00000551535 MAGI1Q96QZ7 1491 aaPredicted RBP27.24■■□□□ 1.95
LMBR1L-221ENST00000551535 FGD5Q6ZNL6 1462 aa27.18■■□□□ 1.94
LMBR1L-221ENST00000551535 GRIN2BQ13224 1484 aa27.17■■□□□ 1.94
LMBR1L-221ENST00000551535 SYNJ2O15056 1496 aa27.14■■□□□ 1.94
LMBR1L-221ENST00000551535 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
LMBR1L-221ENST00000551535 CUX1P39880 1505 aa27.03■■□□□ 1.92
LMBR1L-221ENST00000551535 PBRM1Q86U86 1689 aa26.96■■□□□ 1.91
LMBR1L-221ENST00000551535 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
LMBR1L-221ENST00000551535 ABCA5Q8WWZ7 1642 aa26.83■■□□□ 1.89
LMBR1L-221ENST00000551535 GRIN2AQ12879 1464 aa26.8■■□□□ 1.88
LMBR1L-221ENST00000551535 ERCC6L2Q5T890 1561 aa26.73■■□□□ 1.87
LMBR1L-221ENST00000551535 CEP170Q5SW79 1584 aa26.72■■□□□ 1.87
LMBR1L-221ENST00000551535 NUP160Q12769 1436 aa26.72■■□□□ 1.87
LMBR1L-221ENST00000551535 ADAMTS12P58397 1594 aa26.68■■□□□ 1.86
LMBR1L-221ENST00000551535 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
LMBR1L-221ENST00000551535 SHROOM2Q13796 1616 aa26.64■■□□□ 1.85
LMBR1L-221ENST00000551535 FHAD1B1AJZ9 1412 aa26.64■■□□□ 1.85
LMBR1L-221ENST00000551535 KIF13AQ9H1H9 1805 aa26.56■■□□□ 1.84
LMBR1L-221ENST00000551535 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
LMBR1L-221ENST00000551535 PRG4Q92954 1404 aaPredicted RBP26.52■■□□□ 1.84
LMBR1L-221ENST00000551535 NPM1P06748 294 aaKnown RBP eCLIP26.5■■□□□ 1.83
LMBR1L-221ENST00000551535 TOP2BQ02880 1626 aa26.49■■□□□ 1.83
LMBR1L-221ENST00000551535 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
LMBR1L-221ENST00000551535 JPH4Q96JJ6 628 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms