RNA–Protein interactions for RNA: ENST00000551327.5

PXN-218, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-218ENST00000551327 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
PXN-218ENST00000551327 ABCC9O60706 1549 aa20.18■□□□□ 0.82
PXN-218ENST00000551327 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
PXN-218ENST00000551327 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
PXN-218ENST00000551327 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
PXN-218ENST00000551327 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
PXN-218ENST00000551327 NACADO15069 1562 aa18.79■□□□□ 0.6
PXN-218ENST00000551327 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.58
PXN-218ENST00000551327 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
PXN-218ENST00000551327 DCAF8L2P0C7V8 631 aa18.6■□□□□ 0.57
PXN-218ENST00000551327 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
PXN-218ENST00000551327 SCRIBQ14160 1630 aa18.3■□□□□ 0.52
PXN-218ENST00000551327 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
PXN-218ENST00000551327 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.51
PXN-218ENST00000551327 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
PXN-218ENST00000551327 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
PXN-218ENST00000551327 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
PXN-218ENST00000551327 SHROOM4Q9ULL8 1493 aa18.02■□□□□ 0.48
PXN-218ENST00000551327 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
PXN-218ENST00000551327 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
PXN-218ENST00000551327 NESP48681 1621 aa17.36■□□□□ 0.37
PXN-218ENST00000551327 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
PXN-218ENST00000551327 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
PXN-218ENST00000551327 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
PXN-218ENST00000551327 CUX2O14529 1486 aa17.3■□□□□ 0.36
PXN-218ENST00000551327 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
PXN-218ENST00000551327 THOC2Q8NI27 1593 aaKnown RBP17.25■□□□□ 0.35
PXN-218ENST00000551327 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
PXN-218ENST00000551327 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
PXN-218ENST00000551327 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
PXN-218ENST00000551327 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
PXN-218ENST00000551327 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
PXN-218ENST00000551327 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
PXN-218ENST00000551327 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
PXN-218ENST00000551327 WIZO95785 1651 aa17■□□□□ 0.31
PXN-218ENST00000551327 WDR62O43379 1518 aa16.83■□□□□ 0.28
PXN-218ENST00000551327 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
PXN-218ENST00000551327 PDS5BQ9NTI5 1447 aa16.78■□□□□ 0.28
PXN-218ENST00000551327 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
PXN-218ENST00000551327 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
PXN-218ENST00000551327 PRDM2Q13029 1718 aa16.71■□□□□ 0.27
PXN-218ENST00000551327 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
PXN-218ENST00000551327 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
PXN-218ENST00000551327 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
PXN-218ENST00000551327 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
PXN-218ENST00000551327 CFTRP13569 1480 aa16.57■□□□□ 0.24
PXN-218ENST00000551327 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
PXN-218ENST00000551327 RIMBP3CA6NJZ7 1639 aa16.53■□□□□ 0.24
PXN-218ENST00000551327 RIMBP3BA6NNM3 1639 aa16.53■□□□□ 0.24
PXN-218ENST00000551327 RIMBP3Q9UFD9 1639 aa16.53■□□□□ 0.24
PXN-218ENST00000551327 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
PXN-218ENST00000551327 CHD1O14646 1710 aa16.48■□□□□ 0.23
PXN-218ENST00000551327 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
PXN-218ENST00000551327 CCDC88BA6NC98 1476 aa16.39■□□□□ 0.21
PXN-218ENST00000551327 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
PXN-218ENST00000551327 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
PXN-218ENST00000551327 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
PXN-218ENST00000551327 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
PXN-218ENST00000551327 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
PXN-218ENST00000551327 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
PXN-218ENST00000551327 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.192e-6■■■□□ 15.2
PXN-218ENST00000551327 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
PXN-218ENST00000551327 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
PXN-218ENST00000551327 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
PXN-218ENST00000551327 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
PXN-218ENST00000551327 PBRM1Q86U86 1689 aa16.12■□□□□ 0.17
PXN-218ENST00000551327 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
PXN-218ENST00000551327 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
PXN-218ENST00000551327 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
PXN-218ENST00000551327 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
PXN-218ENST00000551327 CUX1P39880 1505 aa16.09■□□□□ 0.17
PXN-218ENST00000551327 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
PXN-218ENST00000551327 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
PXN-218ENST00000551327 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
PXN-218ENST00000551327 FBLN2P98095 1184 aa16.03■□□□□ 0.16
PXN-218ENST00000551327 SOGA1O94964 1423 aa15.99■□□□□ 0.15
PXN-218ENST00000551327 ERCC6L2Q5T890 1561 aa15.97■□□□□ 0.15
PXN-218ENST00000551327 SYNJ1O43426 1573 aa15.96■□□□□ 0.14
PXN-218ENST00000551327 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
PXN-218ENST00000551327 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
PXN-218ENST00000551327 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
PXN-218ENST00000551327 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
PXN-218ENST00000551327 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
PXN-218ENST00000551327 KIF13AQ9H1H9 1805 aa15.85■□□□□ 0.13
PXN-218ENST00000551327 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
PXN-218ENST00000551327 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
PXN-218ENST00000551327 ADAMTS12P58397 1594 aa15.83■□□□□ 0.13
PXN-218ENST00000551327 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
PXN-218ENST00000551327 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
PXN-218ENST00000551327 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
PXN-218ENST00000551327 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
PXN-218ENST00000551327 GRIN2AQ12879 1464 aa15.76■□□□□ 0.11
PXN-218ENST00000551327 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
PXN-218ENST00000551327 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
PXN-218ENST00000551327 NUP160Q12769 1436 aa15.68■□□□□ 0.1
PXN-218ENST00000551327 SUPT5HO00267 1087 aaKnown RBP15.67■□□□□ 0.1
PXN-218ENST00000551327 RUSC2Q8N2Y8 1516 aa15.64■□□□□ 0.09
PXN-218ENST00000551327 TSPOAP1O95153 1857 aa15.63■□□□□ 0.09
PXN-218ENST00000551327 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
PXN-218ENST00000551327 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms