RNA–Protein interactions for RNA: ENST00000550834.1

DDX23-207, Transcript of DEAD-box helicase 23, humanhuman

TSL 5

Gene DDX23, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-207ENST00000550834 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
DDX23-207ENST00000550834 ABCC9O60706 1549 aa27.12■■□□□ 1.93
DDX23-207ENST00000550834 CCDC180Q9P1Z9 1646 aa26.75■■□□□ 1.87
DDX23-207ENST00000550834 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
DDX23-207ENST00000550834 RB1CC1Q8TDY2 1594 aa25.68■■□□□ 1.7
DDX23-207ENST00000550834 NACADO15069 1562 aa25.42■■□□□ 1.66
DDX23-207ENST00000550834 DCAF8L2P0C7V8 631 aa25.3■■□□□ 1.64
DDX23-207ENST00000550834 PABPN1Q86U42 306 aaKnown RBP eCLIP25.22■■□□□ 1.63
DDX23-207ENST00000550834 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
DDX23-207ENST00000550834 MYO15BQ96JP2 1530 aa24.95■■□□□ 1.58
DDX23-207ENST00000550834 BICRAQ9NZM4 1560 aa24.87■■□□□ 1.57
DDX23-207ENST00000550834 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.52
DDX23-207ENST00000550834 CECR2Q9BXF3 1484 aa24.49■■□□□ 1.51
DDX23-207ENST00000550834 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
DDX23-207ENST00000550834 CC2D2AQ9P2K1 1620 aa24.46■■□□□ 1.51
DDX23-207ENST00000550834 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.51
DDX23-207ENST00000550834 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.48
DDX23-207ENST00000550834 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
DDX23-207ENST00000550834 DNAJC5Q9H3Z4 198 aa24.02■■□□□ 1.44
DDX23-207ENST00000550834 CUX2O14529 1486 aa23.56■■□□□ 1.36
DDX23-207ENST00000550834 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
DDX23-207ENST00000550834 NCAPD3P42695 1498 aa23.48■■□□□ 1.35
DDX23-207ENST00000550834 ATAD2BQ9ULI0 1458 aa23.33■■□□□ 1.33
DDX23-207ENST00000550834 SMARCA2P51531 1590 aa23.26■■□□□ 1.31
DDX23-207ENST00000550834 HMGXB3Q12766 1538 aa23.23■■□□□ 1.31
DDX23-207ENST00000550834 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
DDX23-207ENST00000550834 NESP48681 1621 aa23.16■■□□□ 1.3
DDX23-207ENST00000550834 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
DDX23-207ENST00000550834 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
DDX23-207ENST00000550834 LAMC3Q9Y6N6 1575 aa23■■□□□ 1.27
DDX23-207ENST00000550834 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
DDX23-207ENST00000550834 PEG3Q9GZU2 1588 aa22.97■■□□□ 1.27
DDX23-207ENST00000550834 PDS5BQ9NTI5 1447 aa22.92■■□□□ 1.26
DDX23-207ENST00000550834 KIF21AQ7Z4S6 1674 aa22.83■■□□□ 1.24
DDX23-207ENST00000550834 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
DDX23-207ENST00000550834 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
DDX23-207ENST00000550834 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
DDX23-207ENST00000550834 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
DDX23-207ENST00000550834 WDR62O43379 1518 aa22.62■■□□□ 1.21
DDX23-207ENST00000550834 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
DDX23-207ENST00000550834 OSCARQ8IYS5 282 aa22.51■■□□□ 1.19
DDX23-207ENST00000550834 WIZO95785 1651 aa22.51■■□□□ 1.19
DDX23-207ENST00000550834 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
DDX23-207ENST00000550834 CFTRP13569 1480 aa22.39■■□□□ 1.17
DDX23-207ENST00000550834 URB2Q14146 1524 aaKnown RBP22.27■■□□□ 1.16
DDX23-207ENST00000550834 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
DDX23-207ENST00000550834 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
DDX23-207ENST00000550834 RIMBP3CA6NJZ7 1639 aa22.12■■□□□ 1.13
DDX23-207ENST00000550834 RIMBP3BA6NNM3 1639 aa22.12■■□□□ 1.13
DDX23-207ENST00000550834 RIMBP3Q9UFD9 1639 aa22.12■■□□□ 1.13
DDX23-207ENST00000550834 IFT140Q96RY7 1462 aa22.11■■□□□ 1.13
DDX23-207ENST00000550834 PRDM2Q13029 1718 aa22.08■■□□□ 1.12
DDX23-207ENST00000550834 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
DDX23-207ENST00000550834 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
DDX23-207ENST00000550834 ABCC8Q09428 1581 aa22■■□□□ 1.11
DDX23-207ENST00000550834 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
DDX23-207ENST00000550834 TOPBP1Q92547 1522 aa21.99■■□□□ 1.11
DDX23-207ENST00000550834 CYB5RLQ6IPT4 315 aa21.98■■□□□ 1.11
DDX23-207ENST00000550834 EIF4G3O43432 1585 aaKnown RBP21.9■■□□□ 1.1
DDX23-207ENST00000550834 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
DDX23-207ENST00000550834 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
DDX23-207ENST00000550834 FBLN2P98095 1184 aa21.86■■□□□ 1.09
DDX23-207ENST00000550834 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.091e-6■■■□□ 18.7
DDX23-207ENST00000550834 CHD1O14646 1710 aa21.8■■□□□ 1.08
DDX23-207ENST00000550834 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
DDX23-207ENST00000550834 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
DDX23-207ENST00000550834 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
DDX23-207ENST00000550834 SOGA1O94964 1423 aa21.7■■□□□ 1.06
DDX23-207ENST00000550834 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
DDX23-207ENST00000550834 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
DDX23-207ENST00000550834 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
DDX23-207ENST00000550834 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
DDX23-207ENST00000550834 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
DDX23-207ENST00000550834 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
DDX23-207ENST00000550834 CLASP1Q7Z460 1538 aa21.56■■□□□ 1.04
DDX23-207ENST00000550834 MAGI1Q96QZ7 1491 aaPredicted RBP21.56■■□□□ 1.04
DDX23-207ENST00000550834 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
DDX23-207ENST00000550834 FGD5Q6ZNL6 1462 aa21.55■■□□□ 1.04
DDX23-207ENST00000550834 GRIN2BQ13224 1484 aa21.52■■□□□ 1.04
DDX23-207ENST00000550834 SYNJ2O15056 1496 aa21.49■■□□□ 1.03
DDX23-207ENST00000550834 CUX1P39880 1505 aa21.45■■□□□ 1.02
DDX23-207ENST00000550834 GAPVD1Q14C86 1478 aa21.4■■□□□ 1.02
DDX23-207ENST00000550834 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
DDX23-207ENST00000550834 ABCA10Q8WWZ4 1543 aa21.3■■□□□ 1
DDX23-207ENST00000550834 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
DDX23-207ENST00000550834 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
DDX23-207ENST00000550834 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
DDX23-207ENST00000550834 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
DDX23-207ENST00000550834 NUP160Q12769 1436 aa21.16■□□□□ 0.98
DDX23-207ENST00000550834 CEP170Q5SW79 1584 aa21.15■□□□□ 0.98
DDX23-207ENST00000550834 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
DDX23-207ENST00000550834 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
DDX23-207ENST00000550834 SHROOM2Q13796 1616 aa21.08■□□□□ 0.97
DDX23-207ENST00000550834 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
DDX23-207ENST00000550834 JPH4Q96JJ6 628 aa21.04■□□□□ 0.96
DDX23-207ENST00000550834 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
DDX23-207ENST00000550834 PRG4Q92954 1404 aaPredicted RBP21.03■□□□□ 0.96
DDX23-207ENST00000550834 NPM1P06748 294 aaKnown RBP eCLIP21.02■□□□□ 0.96
DDX23-207ENST00000550834 TOP2BQ02880 1626 aa21.02■□□□□ 0.96
DDX23-207ENST00000550834 BIVM-ERCC5R4GMW8 1640 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms