RNA–Protein interactions for RNA: ENST00000550720.5

LINC02354-204, Transcript of long intergenic non-protein coding RNA 2354, humanhuman

TSL 4

Gene LINC02354, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02354-204ENST00000550720 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
LINC02354-204ENST00000550720 ABCC9O60706 1549 aa25.37■■□□□ 1.65
LINC02354-204ENST00000550720 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
LINC02354-204ENST00000550720 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
LINC02354-204ENST00000550720 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.43
LINC02354-204ENST00000550720 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
LINC02354-204ENST00000550720 NACADO15069 1562 aa23.72■■□□□ 1.39
LINC02354-204ENST00000550720 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
LINC02354-204ENST00000550720 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
LINC02354-204ENST00000550720 MYO15BQ96JP2 1530 aa23.27■■□□□ 1.32
LINC02354-204ENST00000550720 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
LINC02354-204ENST00000550720 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
LINC02354-204ENST00000550720 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.25
LINC02354-204ENST00000550720 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
LINC02354-204ENST00000550720 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
LINC02354-204ENST00000550720 CC2D2AQ9P2K1 1620 aa22.83■■□□□ 1.25
LINC02354-204ENST00000550720 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
LINC02354-204ENST00000550720 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
LINC02354-204ENST00000550720 DNAJC5Q9H3Z4 198 aa22.3■■□□□ 1.16
LINC02354-204ENST00000550720 ERCC6Q03468 1493 aa21.95■■□□□ 1.1
LINC02354-204ENST00000550720 CUX2O14529 1486 aa21.93■■□□□ 1.1
LINC02354-204ENST00000550720 NCAPD3P42695 1498 aa21.93■■□□□ 1.1
LINC02354-204ENST00000550720 ATAD2BQ9ULI0 1458 aa21.83■■□□□ 1.08
LINC02354-204ENST00000550720 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
LINC02354-204ENST00000550720 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
LINC02354-204ENST00000550720 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
LINC02354-204ENST00000550720 NESP48681 1621 aa21.69■■□□□ 1.06
LINC02354-204ENST00000550720 BAZ1BQ9UIG0 1483 aaKnown RBP21.63■■□□□ 1.05
LINC02354-204ENST00000550720 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
LINC02354-204ENST00000550720 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
LINC02354-204ENST00000550720 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
LINC02354-204ENST00000550720 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
LINC02354-204ENST00000550720 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
LINC02354-204ENST00000550720 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
LINC02354-204ENST00000550720 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
LINC02354-204ENST00000550720 CADPSQ9ULU8 1353 aa21.29■■□□□ 1
LINC02354-204ENST00000550720 TRIM41Q8WV44 630 aa21.29■■□□□ 1
LINC02354-204ENST00000550720 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
LINC02354-204ENST00000550720 WDR62O43379 1518 aa21.12■□□□□ 0.97
LINC02354-204ENST00000550720 WIZO95785 1651 aa21.11■□□□□ 0.97
LINC02354-204ENST00000550720 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
LINC02354-204ENST00000550720 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
LINC02354-204ENST00000550720 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
LINC02354-204ENST00000550720 CFTRP13569 1480 aa20.95■□□□□ 0.94
LINC02354-204ENST00000550720 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
LINC02354-204ENST00000550720 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
LINC02354-204ENST00000550720 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
LINC02354-204ENST00000550720 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
LINC02354-204ENST00000550720 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
LINC02354-204ENST00000550720 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
LINC02354-204ENST00000550720 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
LINC02354-204ENST00000550720 RIMBP3CA6NJZ7 1639 aa20.62■□□□□ 0.89
LINC02354-204ENST00000550720 RIMBP3BA6NNM3 1639 aa20.62■□□□□ 0.89
LINC02354-204ENST00000550720 RIMBP3Q9UFD9 1639 aa20.62■□□□□ 0.89
LINC02354-204ENST00000550720 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
LINC02354-204ENST00000550720 PRDM2Q13029 1718 aa20.57■□□□□ 0.88
LINC02354-204ENST00000550720 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
LINC02354-204ENST00000550720 CYB5RLQ6IPT4 315 aa20.54■□□□□ 0.88
LINC02354-204ENST00000550720 ABCC8Q09428 1581 aa20.53■□□□□ 0.88
LINC02354-204ENST00000550720 FBLN2P98095 1184 aa20.49■□□□□ 0.87
LINC02354-204ENST00000550720 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
LINC02354-204ENST00000550720 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.87
LINC02354-204ENST00000550720 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
LINC02354-204ENST00000550720 TRHP20396 242 aaPredicted RBP20.44■□□□□ 0.86
LINC02354-204ENST00000550720 TARBP1Q13395 1621 aaKnown RBP20.37■□□□□ 0.85
LINC02354-204ENST00000550720 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
LINC02354-204ENST00000550720 CHD1O14646 1710 aa20.35■□□□□ 0.85
LINC02354-204ENST00000550720 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
LINC02354-204ENST00000550720 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.84
LINC02354-204ENST00000550720 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
LINC02354-204ENST00000550720 SOGA1O94964 1423 aa20.32■□□□□ 0.84
LINC02354-204ENST00000550720 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.84
LINC02354-204ENST00000550720 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
LINC02354-204ENST00000550720 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
LINC02354-204ENST00000550720 GRIN2BQ13224 1484 aa20.14■□□□□ 0.81
LINC02354-204ENST00000550720 MAGI1Q96QZ7 1491 aaPredicted RBP20.14■□□□□ 0.81
LINC02354-204ENST00000550720 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
LINC02354-204ENST00000550720 CLASP1Q7Z460 1538 aa20.13■□□□□ 0.81
LINC02354-204ENST00000550720 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
LINC02354-204ENST00000550720 CUX1P39880 1505 aa20.12■□□□□ 0.81
LINC02354-204ENST00000550720 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
LINC02354-204ENST00000550720 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
LINC02354-204ENST00000550720 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
LINC02354-204ENST00000550720 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
LINC02354-204ENST00000550720 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
LINC02354-204ENST00000550720 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
LINC02354-204ENST00000550720 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
LINC02354-204ENST00000550720 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
LINC02354-204ENST00000550720 ERCC6L2Q5T890 1561 aa19.83■□□□□ 0.76
LINC02354-204ENST00000550720 NUP160Q12769 1436 aa19.79■□□□□ 0.76
LINC02354-204ENST00000550720 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
LINC02354-204ENST00000550720 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
LINC02354-204ENST00000550720 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
LINC02354-204ENST00000550720 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
LINC02354-204ENST00000550720 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
LINC02354-204ENST00000550720 JPH4Q96JJ6 628 aa19.69■□□□□ 0.74
LINC02354-204ENST00000550720 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
LINC02354-204ENST00000550720 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
LINC02354-204ENST00000550720 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
LINC02354-204ENST00000550720 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms