RNA–Protein interactions for RNA: ENST00000550574.1

TUBA1C-207, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-207ENST00000550574 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
TUBA1C-207ENST00000550574 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
TUBA1C-207ENST00000550574 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
TUBA1C-207ENST00000550574 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
TUBA1C-207ENST00000550574 ABCC9O60706 1549 aa23.8■■□□□ 1.4
TUBA1C-207ENST00000550574 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
TUBA1C-207ENST00000550574 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
TUBA1C-207ENST00000550574 MYO15BQ96JP2 1530 aa23.46■■□□□ 1.35
TUBA1C-207ENST00000550574 NACADO15069 1562 aa23.41■■□□□ 1.34
TUBA1C-207ENST00000550574 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
TUBA1C-207ENST00000550574 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
TUBA1C-207ENST00000550574 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
TUBA1C-207ENST00000550574 UNC13AQ9UPW8 1703 aa22.8■■□□□ 1.24
TUBA1C-207ENST00000550574 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
TUBA1C-207ENST00000550574 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
TUBA1C-207ENST00000550574 PABPN1Q86U42 306 aaKnown RBP eCLIP22.25■■□□□ 1.15
TUBA1C-207ENST00000550574 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
TUBA1C-207ENST00000550574 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
TUBA1C-207ENST00000550574 CECR2Q9BXF3 1484 aa21.89■■□□□ 1.09
TUBA1C-207ENST00000550574 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
TUBA1C-207ENST00000550574 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
TUBA1C-207ENST00000550574 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
TUBA1C-207ENST00000550574 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
TUBA1C-207ENST00000550574 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
TUBA1C-207ENST00000550574 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
TUBA1C-207ENST00000550574 WIZO95785 1651 aa21.64■■□□□ 1.05
TUBA1C-207ENST00000550574 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
TUBA1C-207ENST00000550574 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.05
TUBA1C-207ENST00000550574 ATAD2BQ9ULI0 1458 aa21.57■■□□□ 1.04
TUBA1C-207ENST00000550574 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
TUBA1C-207ENST00000550574 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
TUBA1C-207ENST00000550574 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
TUBA1C-207ENST00000550574 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
TUBA1C-207ENST00000550574 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
TUBA1C-207ENST00000550574 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
TUBA1C-207ENST00000550574 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
TUBA1C-207ENST00000550574 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
TUBA1C-207ENST00000550574 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
TUBA1C-207ENST00000550574 CFTRP13569 1480 aa20.9■□□□□ 0.94
TUBA1C-207ENST00000550574 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.93
TUBA1C-207ENST00000550574 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
TUBA1C-207ENST00000550574 NESP48681 1621 aa20.73■□□□□ 0.91
TUBA1C-207ENST00000550574 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
TUBA1C-207ENST00000550574 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
TUBA1C-207ENST00000550574 CEP164Q9UPV0 1460 aa20.65■□□□□ 0.9
TUBA1C-207ENST00000550574 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
TUBA1C-207ENST00000550574 ABCC8Q09428 1581 aa20.56■□□□□ 0.88
TUBA1C-207ENST00000550574 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
TUBA1C-207ENST00000550574 BIVM-ERCC5R4GMW8 1640 aa20.52■□□□□ 0.88
TUBA1C-207ENST00000550574 TOP2BQ02880 1626 aa20.5■□□□□ 0.87
TUBA1C-207ENST00000550574 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
TUBA1C-207ENST00000550574 MRC2Q9UBG0 1479 aa20.48■□□□□ 0.87
TUBA1C-207ENST00000550574 SYNJ1O43426 1573 aa20.44■□□□□ 0.86
TUBA1C-207ENST00000550574 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
TUBA1C-207ENST00000550574 CUX1P39880 1505 aa20.43■□□□□ 0.86
TUBA1C-207ENST00000550574 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
TUBA1C-207ENST00000550574 TOPBP1Q92547 1522 aa20.4■□□□□ 0.86
TUBA1C-207ENST00000550574 WDR62O43379 1518 aa20.39■□□□□ 0.85
TUBA1C-207ENST00000550574 URB2Q14146 1524 aaKnown RBP20.38■□□□□ 0.85
TUBA1C-207ENST00000550574 FOXD1Q16676 465 aa20.34■□□□□ 0.85
TUBA1C-207ENST00000550574 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
TUBA1C-207ENST00000550574 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
TUBA1C-207ENST00000550574 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
TUBA1C-207ENST00000550574 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
TUBA1C-207ENST00000550574 SOGA1O94964 1423 aa20.18■□□□□ 0.82
TUBA1C-207ENST00000550574 CUX2O14529 1486 aa20.18■□□□□ 0.82
TUBA1C-207ENST00000550574 EEA1Q15075 1411 aa20.17■□□□□ 0.82
TUBA1C-207ENST00000550574 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
TUBA1C-207ENST00000550574 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
TUBA1C-207ENST00000550574 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
TUBA1C-207ENST00000550574 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
TUBA1C-207ENST00000550574 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
TUBA1C-207ENST00000550574 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
TUBA1C-207ENST00000550574 EIF4G3O43432 1585 aaKnown RBP20■□□□□ 0.79
TUBA1C-207ENST00000550574 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
TUBA1C-207ENST00000550574 CUL7Q14999 1698 aa19.98■□□□□ 0.79
TUBA1C-207ENST00000550574 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
TUBA1C-207ENST00000550574 TDRD9Q8NDG6 1382 aaKnown RBP19.93■□□□□ 0.78
TUBA1C-207ENST00000550574 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
TUBA1C-207ENST00000550574 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
TUBA1C-207ENST00000550574 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
TUBA1C-207ENST00000550574 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
TUBA1C-207ENST00000550574 KIF21BO75037 1637 aa19.9■□□□□ 0.78
TUBA1C-207ENST00000550574 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
TUBA1C-207ENST00000550574 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.77
TUBA1C-207ENST00000550574 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
TUBA1C-207ENST00000550574 IGF1RP08069 1367 aa19.83■□□□□ 0.77
TUBA1C-207ENST00000550574 ADAMTS12P58397 1594 aa19.83■□□□□ 0.76
TUBA1C-207ENST00000550574 GOLGA3Q08378 1498 aa19.79■□□□□ 0.76
TUBA1C-207ENST00000550574 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
TUBA1C-207ENST00000550574 CARMIL1Q5VZK9 1371 aa19.79■□□□□ 0.76
TUBA1C-207ENST00000550574 RAPGEF2Q9Y4G8 1499 aa19.79■□□□□ 0.76
TUBA1C-207ENST00000550574 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
TUBA1C-207ENST00000550574 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
TUBA1C-207ENST00000550574 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
TUBA1C-207ENST00000550574 CTTNBP2Q8WZ74 1663 aa19.71■□□□□ 0.75
TUBA1C-207ENST00000550574 CHD1O14646 1710 aa19.69■□□□□ 0.74
TUBA1C-207ENST00000550574 GRIN2AQ12879 1464 aa19.66■□□□□ 0.74
TUBA1C-207ENST00000550574 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
TUBA1C-207ENST00000550574 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms