RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 NISCHQ9Y2I1 1504 aa35.51■■■■□ 3.27
TPCN1-213ENST00000550543 CCDC180Q9P1Z9 1646 aa31.92■■■□□ 2.7
TPCN1-213ENST00000550543 ABCC9O60706 1549 aa31.86■■■□□ 2.69
TPCN1-213ENST00000550543 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
TPCN1-213ENST00000550543 NACADO15069 1562 aa30.24■■■□□ 2.43
TPCN1-213ENST00000550543 DCAF8L2P0C7V8 631 aa29.97■■■□□ 2.39
TPCN1-213ENST00000550543 MYO15BQ96JP2 1530 aa29.87■■■□□ 2.37
TPCN1-213ENST00000550543 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
TPCN1-213ENST00000550543 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
TPCN1-213ENST00000550543 UNC13AQ9UPW8 1703 aa29.48■■■□□ 2.31
TPCN1-213ENST00000550543 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
TPCN1-213ENST00000550543 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
TPCN1-213ENST00000550543 BICRAQ9NZM4 1560 aa29.38■■■□□ 2.29
TPCN1-213ENST00000550543 SHROOM4Q9ULL8 1493 aa29.3■■■□□ 2.28
TPCN1-213ENST00000550543 SCRIBQ14160 1630 aa28.95■■■□□ 2.23
TPCN1-213ENST00000550543 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
TPCN1-213ENST00000550543 CC2D2AQ9P2K1 1620 aa28.78■■■□□ 2.2
TPCN1-213ENST00000550543 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
TPCN1-213ENST00000550543 NCAPD3P42695 1498 aa27.9■■■□□ 2.06
TPCN1-213ENST00000550543 SMARCA2P51531 1590 aa27.77■■■□□ 2.04
TPCN1-213ENST00000550543 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
TPCN1-213ENST00000550543 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
TPCN1-213ENST00000550543 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
TPCN1-213ENST00000550543 CUX2O14529 1486 aa27.65■■■□□ 2.02
TPCN1-213ENST00000550543 ERCC6Q03468 1493 aa27.65■■■□□ 2.02
TPCN1-213ENST00000550543 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
TPCN1-213ENST00000550543 DNAJC5Q9H3Z4 198 aa27.62■■■□□ 2.01
TPCN1-213ENST00000550543 BAZ1BQ9UIG0 1483 aaKnown RBP27.52■■■□□ 2
TPCN1-213ENST00000550543 PEG3Q9GZU2 1588 aa27.48■■□□□ 1.99
TPCN1-213ENST00000550543 NESP48681 1621 aa27.29■■□□□ 1.96
TPCN1-213ENST00000550543 LAMC3Q9Y6N6 1575 aa27.27■■□□□ 1.96
TPCN1-213ENST00000550543 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.96
TPCN1-213ENST00000550543 PDS5BQ9NTI5 1447 aa27.19■■□□□ 1.94
TPCN1-213ENST00000550543 THOC2Q8NI27 1593 aaKnown RBP27.08■■□□□ 1.93
TPCN1-213ENST00000550543 CADPSQ9ULU8 1353 aa27.05■■□□□ 1.92
TPCN1-213ENST00000550543 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
TPCN1-213ENST00000550543 WIZO95785 1651 aa26.89■■□□□ 1.89
TPCN1-213ENST00000550543 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
TPCN1-213ENST00000550543 WDR62O43379 1518 aa26.79■■□□□ 1.88
TPCN1-213ENST00000550543 CEP164Q9UPV0 1460 aa26.78■■□□□ 1.88
TPCN1-213ENST00000550543 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
TPCN1-213ENST00000550543 CFTRP13569 1480 aa26.71■■□□□ 1.87
TPCN1-213ENST00000550543 FANCD2Q9BXW9 1451 aa26.71■■□□□ 1.87
TPCN1-213ENST00000550543 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
TPCN1-213ENST00000550543 URB2Q14146 1524 aaKnown RBP26.41■■□□□ 1.82
TPCN1-213ENST00000550543 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
TPCN1-213ENST00000550543 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
TPCN1-213ENST00000550543 CCDC88BA6NC98 1476 aa26.34■■□□□ 1.81
TPCN1-213ENST00000550543 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
TPCN1-213ENST00000550543 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
TPCN1-213ENST00000550543 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
TPCN1-213ENST00000550543 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
TPCN1-213ENST00000550543 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
TPCN1-213ENST00000550543 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
TPCN1-213ENST00000550543 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.75
TPCN1-213ENST00000550543 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
TPCN1-213ENST00000550543 TARBP1Q13395 1621 aaKnown RBP25.88■■□□□ 1.73
TPCN1-213ENST00000550543 RIMBP3CA6NJZ7 1639 aa25.87■■□□□ 1.73
TPCN1-213ENST00000550543 RIMBP3BA6NNM3 1639 aa25.87■■□□□ 1.73
TPCN1-213ENST00000550543 RIMBP3Q9UFD9 1639 aa25.87■■□□□ 1.73
TPCN1-213ENST00000550543 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.736e-7■■■■□ 22.4
TPCN1-213ENST00000550543 ARHGEF11O15085 1522 aa25.84■■□□□ 1.73
TPCN1-213ENST00000550543 SOGA1O94964 1423 aa25.82■■□□□ 1.72
TPCN1-213ENST00000550543 WDR97A6NE52 1622 aa25.82■■□□□ 1.72
TPCN1-213ENST00000550543 FBLN2P98095 1184 aa25.77■■□□□ 1.72
TPCN1-213ENST00000550543 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
TPCN1-213ENST00000550543 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
TPCN1-213ENST00000550543 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
TPCN1-213ENST00000550543 CHD1O14646 1710 aa25.7■■□□□ 1.7
TPCN1-213ENST00000550543 CYB5RLQ6IPT4 315 aa25.68■■□□□ 1.7
TPCN1-213ENST00000550543 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
TPCN1-213ENST00000550543 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
TPCN1-213ENST00000550543 CUX1P39880 1505 aa25.64■■□□□ 1.7
TPCN1-213ENST00000550543 GRIN2BQ13224 1484 aa25.64■■□□□ 1.69
TPCN1-213ENST00000550543 SNAPC4Q5SXM2 1469 aa25.63■■□□□ 1.69
TPCN1-213ENST00000550543 SYNJ1O43426 1573 aa25.57■■□□□ 1.68
TPCN1-213ENST00000550543 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
TPCN1-213ENST00000550543 SYNJ2O15056 1496 aa25.55■■□□□ 1.68
TPCN1-213ENST00000550543 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.67
TPCN1-213ENST00000550543 GAPVD1Q14C86 1478 aa25.51■■□□□ 1.67
TPCN1-213ENST00000550543 CLASP1Q7Z460 1538 aa25.5■■□□□ 1.67
TPCN1-213ENST00000550543 ABCA10Q8WWZ4 1543 aa25.48■■□□□ 1.67
TPCN1-213ENST00000550543 TRHP20396 242 aaPredicted RBP25.45■■□□□ 1.66
TPCN1-213ENST00000550543 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
TPCN1-213ENST00000550543 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
TPCN1-213ENST00000550543 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
TPCN1-213ENST00000550543 TOP2BQ02880 1626 aa25.27■■□□□ 1.64
TPCN1-213ENST00000550543 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
TPCN1-213ENST00000550543 BIVM-ERCC5R4GMW8 1640 aa25.25■■□□□ 1.63
TPCN1-213ENST00000550543 FHAD1B1AJZ9 1412 aa25.23■■□□□ 1.63
TPCN1-213ENST00000550543 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
TPCN1-213ENST00000550543 NUP160Q12769 1436 aa25.2■■□□□ 1.62
TPCN1-213ENST00000550543 ERICH3Q5RHP9 1530 aa25.19■■□□□ 1.62
TPCN1-213ENST00000550543 CEP170Q5SW79 1584 aa25.08■■□□□ 1.61
TPCN1-213ENST00000550543 SHROOM2Q13796 1616 aa25.03■■□□□ 1.6
TPCN1-213ENST00000550543 ERCC6L2Q5T890 1561 aa24.96■■□□□ 1.59
TPCN1-213ENST00000550543 JPH4Q96JJ6 628 aa24.95■■□□□ 1.58
TPCN1-213ENST00000550543 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.58
TPCN1-213ENST00000550543 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
TPCN1-213ENST00000550543 NPM1P06748 294 aaKnown RBP eCLIP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms