RNA–Protein interactions for RNA: ENST00000550503.1

NAV3-209, Transcript of neuron navigator 3, humanhuman

TSL 5

Gene NAV3, Length 698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAV3-209ENST00000550503 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
NAV3-209ENST00000550503 AEBP2Q6ZN18 517 aaPredicted RBP20.68■□□□□ 0.9
NAV3-209ENST00000550503 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
NAV3-209ENST00000550503 ABCC9O60706 1549 aa19.18■□□□□ 0.66
NAV3-209ENST00000550503 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
NAV3-209ENST00000550503 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
NAV3-209ENST00000550503 RB1CC1Q8TDY2 1594 aa18.15■□□□□ 0.5
NAV3-209ENST00000550503 NACADO15069 1562 aa17.95■□□□□ 0.46
NAV3-209ENST00000550503 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
NAV3-209ENST00000550503 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
NAV3-209ENST00000550503 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
NAV3-209ENST00000550503 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
NAV3-209ENST00000550503 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
NAV3-209ENST00000550503 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
NAV3-209ENST00000550503 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
NAV3-209ENST00000550503 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
NAV3-209ENST00000550503 CECR2Q9BXF3 1484 aa17.4■□□□□ 0.38
NAV3-209ENST00000550503 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
NAV3-209ENST00000550503 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
NAV3-209ENST00000550503 EIF4G1Q04637 1599 aaKnown RBP17.24■□□□□ 0.35
NAV3-209ENST00000550503 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
NAV3-209ENST00000550503 ZCCHC6Q5VYS8 1495 aaKnown RBP17.09■□□□□ 0.33
NAV3-209ENST00000550503 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
NAV3-209ENST00000550503 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
NAV3-209ENST00000550503 CUX2O14529 1486 aa16.91■□□□□ 0.3
NAV3-209ENST00000550503 FOXD1Q16676 465 aa16.71■□□□□ 0.27
NAV3-209ENST00000550503 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
NAV3-209ENST00000550503 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
NAV3-209ENST00000550503 HMGXB3Q12766 1538 aa16.43■□□□□ 0.22
NAV3-209ENST00000550503 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
NAV3-209ENST00000550503 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
NAV3-209ENST00000550503 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
NAV3-209ENST00000550503 NESP48681 1621 aa16.34■□□□□ 0.21
NAV3-209ENST00000550503 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
NAV3-209ENST00000550503 SMARCA4P51532 1647 aa16.24■□□□□ 0.19
NAV3-209ENST00000550503 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
NAV3-209ENST00000550503 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.18
NAV3-209ENST00000550503 BAZ1BQ9UIG0 1483 aaKnown RBP16.17■□□□□ 0.18
NAV3-209ENST00000550503 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
NAV3-209ENST00000550503 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
NAV3-209ENST00000550503 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
NAV3-209ENST00000550503 WDR62O43379 1518 aa16.07■□□□□ 0.16
NAV3-209ENST00000550503 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
NAV3-209ENST00000550503 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
NAV3-209ENST00000550503 MSH5O43196 834 aa16■□□□□ 0.15
NAV3-209ENST00000550503 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
NAV3-209ENST00000550503 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
NAV3-209ENST00000550503 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
NAV3-209ENST00000550503 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
NAV3-209ENST00000550503 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
NAV3-209ENST00000550503 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
NAV3-209ENST00000550503 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
NAV3-209ENST00000550503 CFTRP13569 1480 aa15.76■□□□□ 0.11
NAV3-209ENST00000550503 ARHGEF11O15085 1522 aa15.73■□□□□ 0.11
NAV3-209ENST00000550503 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
NAV3-209ENST00000550503 WIZO95785 1651 aa15.62■□□□□ 0.09
NAV3-209ENST00000550503 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
NAV3-209ENST00000550503 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
NAV3-209ENST00000550503 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
NAV3-209ENST00000550503 RSF1Q96T23 1441 aaPredicted RBP15.53■□□□□ 0.08
NAV3-209ENST00000550503 CYB5RLQ6IPT4 315 aa15.5■□□□□ 0.07
NAV3-209ENST00000550503 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
NAV3-209ENST00000550503 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
NAV3-209ENST00000550503 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
NAV3-209ENST00000550503 EIF4G3O43432 1585 aaKnown RBP15.47■□□□□ 0.07
NAV3-209ENST00000550503 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
NAV3-209ENST00000550503 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
NAV3-209ENST00000550503 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
NAV3-209ENST00000550503 CHD1O14646 1710 aa15.38■□□□□ 0.05
NAV3-209ENST00000550503 TARBP1Q13395 1621 aaKnown RBP15.37■□□□□ 0.05
NAV3-209ENST00000550503 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
NAV3-209ENST00000550503 DNMBPQ6XZF7 1577 aa15.36■□□□□ 0.05
NAV3-209ENST00000550503 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.04
NAV3-209ENST00000550503 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.04
NAV3-209ENST00000550503 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
NAV3-209ENST00000550503 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.04
NAV3-209ENST00000550503 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
NAV3-209ENST00000550503 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
NAV3-209ENST00000550503 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
NAV3-209ENST00000550503 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
NAV3-209ENST00000550503 FBLN2P98095 1184 aa15.18■□□□□ 0.02
NAV3-209ENST00000550503 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
NAV3-209ENST00000550503 SOGA1O94964 1423 aa15.13■□□□□ 0.01
NAV3-209ENST00000550503 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
NAV3-209ENST00000550503 RAD54L2Q9Y4B4 1467 aa15.13■□□□□ 0.01
NAV3-209ENST00000550503 TDRD9Q8NDG6 1382 aaKnown RBP15.12■□□□□ 0.01
NAV3-209ENST00000550503 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
NAV3-209ENST00000550503 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
NAV3-209ENST00000550503 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
NAV3-209ENST00000550503 CUX1P39880 1505 aa14.97□□□□□ -0.01
NAV3-209ENST00000550503 PPP6R1Q9UPN7 881 aa14.96□□□□□ -0.01
NAV3-209ENST00000550503 PBRM1Q86U86 1689 aa14.95□□□□□ -0.02
NAV3-209ENST00000550503 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
NAV3-209ENST00000550503 NUP160Q12769 1436 aa14.94□□□□□ -0.02
NAV3-209ENST00000550503 ABCA5Q8WWZ7 1642 aa14.94□□□□□ -0.02
NAV3-209ENST00000550503 ABCA10Q8WWZ4 1543 aa14.93□□□□□ -0.02
NAV3-209ENST00000550503 SHROOM2Q13796 1616 aa14.93□□□□□ -0.02
NAV3-209ENST00000550503 KIF13AQ9H1H9 1805 aa14.92□□□□□ -0.02
NAV3-209ENST00000550503 ADRA2BP18089 450 aa14.92□□□□□ -0.02
NAV3-209ENST00000550503 CEP170Q5SW79 1584 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms