RNA–Protein interactions for RNA: ENST00000550345.5

PFKM-219, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 762 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-219ENST00000550345 NISCHQ9Y2I1 1504 aa22.58■■□□□ 1.21
PFKM-219ENST00000550345 ABCC9O60706 1549 aa21.15■□□□□ 0.98
PFKM-219ENST00000550345 AEBP2Q6ZN18 517 aaPredicted RBP20.97■□□□□ 0.95
PFKM-219ENST00000550345 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
PFKM-219ENST00000550345 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
PFKM-219ENST00000550345 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
PFKM-219ENST00000550345 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
PFKM-219ENST00000550345 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
PFKM-219ENST00000550345 NACADO15069 1562 aa19.51■□□□□ 0.71
PFKM-219ENST00000550345 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
PFKM-219ENST00000550345 DCAF8L2P0C7V8 631 aa19.37■□□□□ 0.69
PFKM-219ENST00000550345 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
PFKM-219ENST00000550345 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
PFKM-219ENST00000550345 CECR2Q9BXF3 1484 aa19.1■□□□□ 0.65
PFKM-219ENST00000550345 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
PFKM-219ENST00000550345 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
PFKM-219ENST00000550345 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
PFKM-219ENST00000550345 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
PFKM-219ENST00000550345 ZCCHC6Q5VYS8 1495 aaKnown RBP18.8■□□□□ 0.6
PFKM-219ENST00000550345 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
PFKM-219ENST00000550345 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
PFKM-219ENST00000550345 CUX2O14529 1486 aa18.45■□□□□ 0.54
PFKM-219ENST00000550345 ERCC6Q03468 1493 aa18.29■□□□□ 0.52
PFKM-219ENST00000550345 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
PFKM-219ENST00000550345 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
PFKM-219ENST00000550345 NESP48681 1621 aa18.01■□□□□ 0.47
PFKM-219ENST00000550345 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
PFKM-219ENST00000550345 SENP3Q9H4L4 574 aaPredicted RBP17.9■□□□□ 0.46
PFKM-219ENST00000550345 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
PFKM-219ENST00000550345 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
PFKM-219ENST00000550345 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
PFKM-219ENST00000550345 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
PFKM-219ENST00000550345 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
PFKM-219ENST00000550345 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
PFKM-219ENST00000550345 BAZ1BQ9UIG0 1483 aaKnown RBP17.68■□□□□ 0.42
PFKM-219ENST00000550345 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.42
PFKM-219ENST00000550345 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
PFKM-219ENST00000550345 BAZ1AQ9NRL2 1556 aaPredicted RBP17.59■□□□□ 0.41
PFKM-219ENST00000550345 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
PFKM-219ENST00000550345 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
PFKM-219ENST00000550345 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
PFKM-219ENST00000550345 WDR62O43379 1518 aa17.51■□□□□ 0.39
PFKM-219ENST00000550345 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
PFKM-219ENST00000550345 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
PFKM-219ENST00000550345 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.38
PFKM-219ENST00000550345 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.38
PFKM-219ENST00000550345 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.38
PFKM-219ENST00000550345 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
PFKM-219ENST00000550345 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.36
PFKM-219ENST00000550345 WIZO95785 1651 aa17.25■□□□□ 0.35
PFKM-219ENST00000550345 ARHGEF11O15085 1522 aa17.25■□□□□ 0.35
PFKM-219ENST00000550345 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
PFKM-219ENST00000550345 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
PFKM-219ENST00000550345 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
PFKM-219ENST00000550345 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
PFKM-219ENST00000550345 CFTRP13569 1480 aa17.11■□□□□ 0.33
PFKM-219ENST00000550345 ZNF608Q9ULD9 1512 aaPredicted RBP17.09■□□□□ 0.33
PFKM-219ENST00000550345 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
PFKM-219ENST00000550345 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
PFKM-219ENST00000550345 IFT140Q96RY7 1462 aa17■□□□□ 0.31
PFKM-219ENST00000550345 CHD1O14646 1710 aa16.98■□□□□ 0.31
PFKM-219ENST00000550345 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
PFKM-219ENST00000550345 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
PFKM-219ENST00000550345 FBLN2P98095 1184 aa16.89■□□□□ 0.29
PFKM-219ENST00000550345 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
PFKM-219ENST00000550345 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
PFKM-219ENST00000550345 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.291e-6■■■■■ 33.8
PFKM-219ENST00000550345 FOXD1Q16676 465 aa16.8■□□□□ 0.28
PFKM-219ENST00000550345 SUPT5HO00267 1087 aaKnown RBP16.78■□□□□ 0.28
PFKM-219ENST00000550345 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
PFKM-219ENST00000550345 ABCC8Q09428 1581 aa16.75■□□□□ 0.27
PFKM-219ENST00000550345 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
PFKM-219ENST00000550345 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
PFKM-219ENST00000550345 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
PFKM-219ENST00000550345 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
PFKM-219ENST00000550345 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.26
PFKM-219ENST00000550345 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
PFKM-219ENST00000550345 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
PFKM-219ENST00000550345 CHMP7Q8WUX9 453 aaPredicted RBP16.63■□□□□ 0.25
PFKM-219ENST00000550345 GAPVD1Q14C86 1478 aa16.6■□□□□ 0.25
PFKM-219ENST00000550345 SOGA1O94964 1423 aa16.57■□□□□ 0.24
PFKM-219ENST00000550345 ILDR1Q86SU0 546 aaPredicted RBP16.54■□□□□ 0.24
PFKM-219ENST00000550345 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
PFKM-219ENST00000550345 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
PFKM-219ENST00000550345 WDR97A6NE52 1622 aa16.5■□□□□ 0.23
PFKM-219ENST00000550345 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
PFKM-219ENST00000550345 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
PFKM-219ENST00000550345 KIF13AQ9H1H9 1805 aa16.46■□□□□ 0.23
PFKM-219ENST00000550345 ERCC6L2Q5T890 1561 aa16.46■□□□□ 0.23
PFKM-219ENST00000550345 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
PFKM-219ENST00000550345 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
PFKM-219ENST00000550345 KDM4FA0A1W2PPD8 638 aa16.37■□□□□ 0.21
PFKM-219ENST00000550345 CUX1P39880 1505 aa16.36■□□□□ 0.21
PFKM-219ENST00000550345 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
PFKM-219ENST00000550345 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
PFKM-219ENST00000550345 FAM69CQ0P6D2 419 aa16.27■□□□□ 0.2
PFKM-219ENST00000550345 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.19
PFKM-219ENST00000550345 SHROOM2Q13796 1616 aa16.25■□□□□ 0.19
PFKM-219ENST00000550345 NUP160Q12769 1436 aa16.24■□□□□ 0.19
PFKM-219ENST00000550345 ABCC10Q5T3U5 1492 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms