RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 NISCHQ9Y2I1 1504 aa20.4■□□□□ 0.86
ATXN2-220ENST00000550236 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
ATXN2-220ENST00000550236 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
ATXN2-220ENST00000550236 ABCC9O60706 1549 aa18.07■□□□□ 0.48
ATXN2-220ENST00000550236 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
ATXN2-220ENST00000550236 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
ATXN2-220ENST00000550236 RB1CC1Q8TDY2 1594 aa17.2■□□□□ 0.34
ATXN2-220ENST00000550236 NACADO15069 1562 aa17.11■□□□□ 0.33
ATXN2-220ENST00000550236 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
ATXN2-220ENST00000550236 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
ATXN2-220ENST00000550236 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
ATXN2-220ENST00000550236 MYO15BQ96JP2 1530 aa16.84■□□□□ 0.29
ATXN2-220ENST00000550236 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
ATXN2-220ENST00000550236 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
ATXN2-220ENST00000550236 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
ATXN2-220ENST00000550236 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
ATXN2-220ENST00000550236 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
ATXN2-220ENST00000550236 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
ATXN2-220ENST00000550236 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
ATXN2-220ENST00000550236 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
ATXN2-220ENST00000550236 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
ATXN2-220ENST00000550236 ATAD2BQ9ULI0 1458 aa15.81■□□□□ 0.12
ATXN2-220ENST00000550236 BAZ1AQ9NRL2 1556 aaPredicted RBP15.8■□□□□ 0.12
ATXN2-220ENST00000550236 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
ATXN2-220ENST00000550236 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
ATXN2-220ENST00000550236 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
ATXN2-220ENST00000550236 PHF23Q9BUL5 403 aaPredicted RBP15.71■□□□□ 0.11
ATXN2-220ENST00000550236 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
ATXN2-220ENST00000550236 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
ATXN2-220ENST00000550236 WIZO95785 1651 aa15.66■□□□□ 0.1
ATXN2-220ENST00000550236 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
ATXN2-220ENST00000550236 NESP48681 1621 aa15.6■□□□□ 0.09
ATXN2-220ENST00000550236 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
ATXN2-220ENST00000550236 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
ATXN2-220ENST00000550236 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
ATXN2-220ENST00000550236 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
ATXN2-220ENST00000550236 TOP2AP11388 1531 aaKnown RBP15.37■□□□□ 0.05
ATXN2-220ENST00000550236 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
ATXN2-220ENST00000550236 CUX2O14529 1486 aa15.33■□□□□ 0.04
ATXN2-220ENST00000550236 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
ATXN2-220ENST00000550236 THOC2Q8NI27 1593 aaKnown RBP15.31■□□□□ 0.04
ATXN2-220ENST00000550236 CCDC88BA6NC98 1476 aa15.24■□□□□ 0.03
ATXN2-220ENST00000550236 CFTRP13569 1480 aa15.2■□□□□ 0.02
ATXN2-220ENST00000550236 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
ATXN2-220ENST00000550236 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
ATXN2-220ENST00000550236 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
ATXN2-220ENST00000550236 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
ATXN2-220ENST00000550236 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
ATXN2-220ENST00000550236 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
ATXN2-220ENST00000550236 WDR62O43379 1518 aa15.12■□□□□ 0.01
ATXN2-220ENST00000550236 DNAJC5Q9H3Z4 198 aa15.11■□□□□ 0.01
ATXN2-220ENST00000550236 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
ATXN2-220ENST00000550236 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
ATXN2-220ENST00000550236 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
ATXN2-220ENST00000550236 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
ATXN2-220ENST00000550236 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
ATXN2-220ENST00000550236 IFT140Q96RY7 1462 aa14.84□□□□□ -0.03
ATXN2-220ENST00000550236 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
ATXN2-220ENST00000550236 POLA1P09884 1462 aaPredicted RBP14.81□□□□□ -0.04
ATXN2-220ENST00000550236 CUX1P39880 1505 aa14.8□□□□□ -0.04
ATXN2-220ENST00000550236 TARBP1Q13395 1621 aaKnown RBP14.8□□□□□ -0.04
ATXN2-220ENST00000550236 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
ATXN2-220ENST00000550236 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.046e-7■■■■■ 31.2
ATXN2-220ENST00000550236 FGD5Q6ZNL6 1462 aa14.77□□□□□ -0.04
ATXN2-220ENST00000550236 SOGA1O94964 1423 aa14.77□□□□□ -0.04
ATXN2-220ENST00000550236 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
ATXN2-220ENST00000550236 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
ATXN2-220ENST00000550236 FBLN2P98095 1184 aa14.72□□□□□ -0.05
ATXN2-220ENST00000550236 CHD1O14646 1710 aa14.7□□□□□ -0.06
ATXN2-220ENST00000550236 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
ATXN2-220ENST00000550236 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
ATXN2-220ENST00000550236 WDR97A6NE52 1622 aa14.64□□□□□ -0.07
ATXN2-220ENST00000550236 WRNQ14191 1432 aaPredicted RBP eCLIP14.62□□□□□ -0.07
ATXN2-220ENST00000550236 SNAPC4Q5SXM2 1469 aa14.62□□□□□ -0.07
ATXN2-220ENST00000550236 PBRM1Q86U86 1689 aa14.61□□□□□ -0.07
ATXN2-220ENST00000550236 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
ATXN2-220ENST00000550236 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
ATXN2-220ENST00000550236 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
ATXN2-220ENST00000550236 RIMBP3CA6NJZ7 1639 aa14.57□□□□□ -0.08
ATXN2-220ENST00000550236 RIMBP3BA6NNM3 1639 aa14.57□□□□□ -0.08
ATXN2-220ENST00000550236 RIMBP3Q9UFD9 1639 aa14.57□□□□□ -0.08
ATXN2-220ENST00000550236 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
ATXN2-220ENST00000550236 GRIN2BQ13224 1484 aa14.57□□□□□ -0.08
ATXN2-220ENST00000550236 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
ATXN2-220ENST00000550236 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
ATXN2-220ENST00000550236 MAGI1Q96QZ7 1491 aaPredicted RBP14.51□□□□□ -0.09
ATXN2-220ENST00000550236 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
ATXN2-220ENST00000550236 SYNJ2O15056 1496 aa14.49□□□□□ -0.09
ATXN2-220ENST00000550236 CYB5RLQ6IPT4 315 aa14.47□□□□□ -0.09
ATXN2-220ENST00000550236 CLASP1Q7Z460 1538 aa14.42□□□□□ -0.1
ATXN2-220ENST00000550236 ADAMTS12P58397 1594 aa14.42□□□□□ -0.1
ATXN2-220ENST00000550236 PLPPR3Q6T4P5 718 aa14.4□□□□□ -0.1
ATXN2-220ENST00000550236 GRIN2AQ12879 1464 aa14.39□□□□□ -0.11
ATXN2-220ENST00000550236 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
ATXN2-220ENST00000550236 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
ATXN2-220ENST00000550236 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
ATXN2-220ENST00000550236 CEP170Q5SW79 1584 aa14.37□□□□□ -0.11
ATXN2-220ENST00000550236 ERCC6L2Q5T890 1561 aa14.32□□□□□ -0.12
ATXN2-220ENST00000550236 KIF27Q86VH2 1401 aa14.32□□□□□ -0.12
ATXN2-220ENST00000550236 IGF1RP08069 1367 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms