RNA–Protein interactions for RNA: ENST00000549939.1

PYM1-206, Transcript of PYM homolog 1, exon junction complex associated factor, humanhuman

TSL 5

Gene PYM1, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYM1-206ENST00000549939 NISCHQ9Y2I1 1504 aa33.05■■■□□ 2.88
PYM1-206ENST00000549939 AEBP2Q6ZN18 517 aaPredicted RBP30.94■■■□□ 2.54
PYM1-206ENST00000549939 CHIC1Q5VXU3 224 aa30.41■■■□□ 2.46
PYM1-206ENST00000549939 ABCC9O60706 1549 aa30.27■■■□□ 2.44
PYM1-206ENST00000549939 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
PYM1-206ENST00000549939 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
PYM1-206ENST00000549939 RB1CC1Q8TDY2 1594 aa28.62■■■□□ 2.17
PYM1-206ENST00000549939 NACADO15069 1562 aa28.33■■■□□ 2.12
PYM1-206ENST00000549939 DCAF8L2P0C7V8 631 aa28.21■■■□□ 2.11
PYM1-206ENST00000549939 PABPN1Q86U42 306 aaKnown RBP eCLIP28.14■■■□□ 2.1
PYM1-206ENST00000549939 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
PYM1-206ENST00000549939 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
PYM1-206ENST00000549939 BICRAQ9NZM4 1560 aa27.76■■■□□ 2.03
PYM1-206ENST00000549939 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
PYM1-206ENST00000549939 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
PYM1-206ENST00000549939 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
PYM1-206ENST00000549939 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
PYM1-206ENST00000549939 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.96
PYM1-206ENST00000549939 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
PYM1-206ENST00000549939 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.94
PYM1-206ENST00000549939 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
PYM1-206ENST00000549939 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
PYM1-206ENST00000549939 CUX2O14529 1486 aa26.25■■□□□ 1.79
PYM1-206ENST00000549939 ERCC6Q03468 1493 aa26.2■■□□□ 1.78
PYM1-206ENST00000549939 SENP3Q9H4L4 574 aaPredicted RBP26.15■■□□□ 1.78
PYM1-206ENST00000549939 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
PYM1-206ENST00000549939 ATAD2BQ9ULI0 1458 aa26.01■■□□□ 1.75
PYM1-206ENST00000549939 SMARCA2P51531 1590 aa25.93■■□□□ 1.74
PYM1-206ENST00000549939 HMGXB3Q12766 1538 aa25.9■■□□□ 1.74
PYM1-206ENST00000549939 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
PYM1-206ENST00000549939 NESP48681 1621 aa25.86■■□□□ 1.73
PYM1-206ENST00000549939 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
PYM1-206ENST00000549939 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
PYM1-206ENST00000549939 THOC2Q8NI27 1593 aaKnown RBP25.66■■□□□ 1.7
PYM1-206ENST00000549939 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
PYM1-206ENST00000549939 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
PYM1-206ENST00000549939 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
PYM1-206ENST00000549939 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
PYM1-206ENST00000549939 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
PYM1-206ENST00000549939 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
PYM1-206ENST00000549939 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
PYM1-206ENST00000549939 MRC2Q9UBG0 1479 aa25.31■■□□□ 1.64
PYM1-206ENST00000549939 WDR62O43379 1518 aa25.23■■□□□ 1.63
PYM1-206ENST00000549939 WIZO95785 1651 aa25.13■■□□□ 1.61
PYM1-206ENST00000549939 CEP164Q9UPV0 1460 aa25.13■■□□□ 1.61
PYM1-206ENST00000549939 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
PYM1-206ENST00000549939 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
PYM1-206ENST00000549939 CFTRP13569 1480 aa24.96■■□□□ 1.59
PYM1-206ENST00000549939 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
PYM1-206ENST00000549939 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
PYM1-206ENST00000549939 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
PYM1-206ENST00000549939 PLPPR3Q6T4P5 718 aa24.77■■□□□ 1.56
PYM1-206ENST00000549939 RIMBP3CA6NJZ7 1639 aa24.69■■□□□ 1.54
PYM1-206ENST00000549939 RIMBP3BA6NNM3 1639 aa24.69■■□□□ 1.54
PYM1-206ENST00000549939 RIMBP3Q9UFD9 1639 aa24.69■■□□□ 1.54
PYM1-206ENST00000549939 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
PYM1-206ENST00000549939 IFT140Q96RY7 1462 aa24.64■■□□□ 1.54
PYM1-206ENST00000549939 ZNF608Q9ULD9 1512 aaPredicted RBP24.62■■□□□ 1.53
PYM1-206ENST00000549939 ARHGEF11O15085 1522 aa24.58■■□□□ 1.53
PYM1-206ENST00000549939 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
PYM1-206ENST00000549939 TOPBP1Q92547 1522 aa24.53■■□□□ 1.52
PYM1-206ENST00000549939 CYB5RLQ6IPT4 315 aa24.5■■□□□ 1.51
PYM1-206ENST00000549939 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
PYM1-206ENST00000549939 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
PYM1-206ENST00000549939 DNMBPQ6XZF7 1577 aa24.4■■□□□ 1.5
PYM1-206ENST00000549939 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
PYM1-206ENST00000549939 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.491e-6■■■■■ 33.8
PYM1-206ENST00000549939 FBLN2P98095 1184 aa24.37■■□□□ 1.49
PYM1-206ENST00000549939 CHD1O14646 1710 aa24.36■■□□□ 1.49
PYM1-206ENST00000549939 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
PYM1-206ENST00000549939 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
PYM1-206ENST00000549939 FOXD1Q16676 465 aa24.29■■□□□ 1.48
PYM1-206ENST00000549939 POLA1P09884 1462 aaPredicted RBP24.25■■□□□ 1.47
PYM1-206ENST00000549939 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
PYM1-206ENST00000549939 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
PYM1-206ENST00000549939 SOGA1O94964 1423 aa24.17■■□□□ 1.46
PYM1-206ENST00000549939 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
PYM1-206ENST00000549939 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
PYM1-206ENST00000549939 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
PYM1-206ENST00000549939 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
PYM1-206ENST00000549939 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
PYM1-206ENST00000549939 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
PYM1-206ENST00000549939 MAGI1Q96QZ7 1491 aaPredicted RBP24.02■■□□□ 1.44
PYM1-206ENST00000549939 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
PYM1-206ENST00000549939 SYNJ2O15056 1496 aa23.95■■□□□ 1.42
PYM1-206ENST00000549939 CUX1P39880 1505 aa23.94■■□□□ 1.42
PYM1-206ENST00000549939 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
PYM1-206ENST00000549939 PBRM1Q86U86 1689 aa23.84■■□□□ 1.41
PYM1-206ENST00000549939 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
PYM1-206ENST00000549939 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
PYM1-206ENST00000549939 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
PYM1-206ENST00000549939 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
PYM1-206ENST00000549939 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
PYM1-206ENST00000549939 NUP160Q12769 1436 aa23.59■■□□□ 1.37
PYM1-206ENST00000549939 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
PYM1-206ENST00000549939 PPP6R1Q9UPN7 881 aa23.59■■□□□ 1.37
PYM1-206ENST00000549939 ADAMTS12P58397 1594 aa23.58■■□□□ 1.37
PYM1-206ENST00000549939 ADRA2BP18089 450 aa23.55■■□□□ 1.36
PYM1-206ENST00000549939 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
PYM1-206ENST00000549939 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms