RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
CALCOCO1-215ENST00000549688 CCDC180Q9P1Z9 1646 aa14.8□□□□□ -0.04
CALCOCO1-215ENST00000549688 ABCC9O60706 1549 aa14.01□□□□□ -0.17
CALCOCO1-215ENST00000549688 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
CALCOCO1-215ENST00000549688 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
CALCOCO1-215ENST00000549688 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
CALCOCO1-215ENST00000549688 NACADO15069 1562 aa13.81□□□□□ -0.2
CALCOCO1-215ENST00000549688 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
CALCOCO1-215ENST00000549688 DCAF8L2P0C7V8 631 aa13.74□□□□□ -0.21
CALCOCO1-215ENST00000549688 SCRIBQ14160 1630 aa13.41□□□□□ -0.26
CALCOCO1-215ENST00000549688 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
CALCOCO1-215ENST00000549688 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
CALCOCO1-215ENST00000549688 BICRAQ9NZM4 1560 aa13.21□□□□□ -0.29
CALCOCO1-215ENST00000549688 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
CALCOCO1-215ENST00000549688 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO1-215ENST00000549688 SMARCA4P51532 1647 aa12.9□□□□□ -0.34
CALCOCO1-215ENST00000549688 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
CALCOCO1-215ENST00000549688 CECR2Q9BXF3 1484 aa12.88□□□□□ -0.35
CALCOCO1-215ENST00000549688 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
CALCOCO1-215ENST00000549688 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
CALCOCO1-215ENST00000549688 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
CALCOCO1-215ENST00000549688 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
CALCOCO1-215ENST00000549688 CC2D2AQ9P2K1 1620 aa12.74□□□□□ -0.37
CALCOCO1-215ENST00000549688 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
CALCOCO1-215ENST00000549688 HMGXB3Q12766 1538 aa12.71□□□□□ -0.38
CALCOCO1-215ENST00000549688 WIZO95785 1651 aa12.7□□□□□ -0.38
CALCOCO1-215ENST00000549688 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
CALCOCO1-215ENST00000549688 BAZ1BQ9UIG0 1483 aaKnown RBP12.67□□□□□ -0.38
CALCOCO1-215ENST00000549688 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
CALCOCO1-215ENST00000549688 TOP2AP11388 1531 aaKnown RBP12.66□□□□□ -0.38
CALCOCO1-215ENST00000549688 DNAJC5BQ9UF47 199 aa12.46□□□□□ -0.41
CALCOCO1-215ENST00000549688 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
CALCOCO1-215ENST00000549688 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
CALCOCO1-215ENST00000549688 PRDM2Q13029 1718 aa12.35□□□□□ -0.43
CALCOCO1-215ENST00000549688 CADPSQ9ULU8 1353 aa12.33□□□□□ -0.44
CALCOCO1-215ENST00000549688 CFTRP13569 1480 aa12.33□□□□□ -0.44
CALCOCO1-215ENST00000549688 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
CALCOCO1-215ENST00000549688 NESP48681 1621 aa12.19□□□□□ -0.46
CALCOCO1-215ENST00000549688 FANCD2Q9BXW9 1451 aa12.19□□□□□ -0.46
CALCOCO1-215ENST00000549688 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
CALCOCO1-215ENST00000549688 ABCC8Q09428 1581 aa12.14□□□□□ -0.47
CALCOCO1-215ENST00000549688 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
CALCOCO1-215ENST00000549688 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
CALCOCO1-215ENST00000549688 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
CALCOCO1-215ENST00000549688 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
CALCOCO1-215ENST00000549688 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
CALCOCO1-215ENST00000549688 TOP2BQ02880 1626 aa12.07□□□□□ -0.48
CALCOCO1-215ENST00000549688 BIVM-ERCC5R4GMW8 1640 aa12.06□□□□□ -0.48
CALCOCO1-215ENST00000549688 WDR62O43379 1518 aa12.03□□□□□ -0.48
CALCOCO1-215ENST00000549688 TRIM41Q8WV44 630 aa12.03□□□□□ -0.48
CALCOCO1-215ENST00000549688 CUX1P39880 1505 aa12.02□□□□□ -0.48
CALCOCO1-215ENST00000549688 TOPBP1Q92547 1522 aa12.02□□□□□ -0.48
CALCOCO1-215ENST00000549688 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
CALCOCO1-215ENST00000549688 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
CALCOCO1-215ENST00000549688 CHIC1Q5VXU3 224 aa12.01□□□□□ -0.49
CALCOCO1-215ENST00000549688 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
CALCOCO1-215ENST00000549688 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
CALCOCO1-215ENST00000549688 POLA1P09884 1462 aaPredicted RBP11.94□□□□□ -0.5
CALCOCO1-215ENST00000549688 CUX2O14529 1486 aa11.92□□□□□ -0.5
CALCOCO1-215ENST00000549688 WDR97A6NE52 1622 aa11.92□□□□□ -0.5
CALCOCO1-215ENST00000549688 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
CALCOCO1-215ENST00000549688 SOGA1O94964 1423 aa11.89□□□□□ -0.51
CALCOCO1-215ENST00000549688 EEA1Q15075 1411 aa11.89□□□□□ -0.51
CALCOCO1-215ENST00000549688 ABCA10Q8WWZ4 1543 aa11.88□□□□□ -0.51
CALCOCO1-215ENST00000549688 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
CALCOCO1-215ENST00000549688 KIF27Q86VH2 1401 aa11.86□□□□□ -0.51
CALCOCO1-215ENST00000549688 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
CALCOCO1-215ENST00000549688 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
CALCOCO1-215ENST00000549688 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
CALCOCO1-215ENST00000549688 ERICH3Q5RHP9 1530 aa11.78□□□□□ -0.52
CALCOCO1-215ENST00000549688 EIF4G3O43432 1585 aaKnown RBP11.77□□□□□ -0.53
CALCOCO1-215ENST00000549688 CUL7Q14999 1698 aa11.76□□□□□ -0.53
CALCOCO1-215ENST00000549688 PBRM1Q86U86 1689 aa11.76□□□□□ -0.53
CALCOCO1-215ENST00000549688 GRIN2BQ13224 1484 aa11.75□□□□□ -0.53
CALCOCO1-215ENST00000549688 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
CALCOCO1-215ENST00000549688 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
CALCOCO1-215ENST00000549688 ZNF608Q9ULD9 1512 aaPredicted RBP11.72□□□□□ -0.53
CALCOCO1-215ENST00000549688 AQRO60306 1485 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■■■■ 31.2
CALCOCO1-215ENST00000549688 MAGI1Q96QZ7 1491 aaPredicted RBP11.71□□□□□ -0.53
CALCOCO1-215ENST00000549688 KIF21BO75037 1637 aa11.71□□□□□ -0.54
CALCOCO1-215ENST00000549688 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
CALCOCO1-215ENST00000549688 IGF1RP08069 1367 aa11.69□□□□□ -0.54
CALCOCO1-215ENST00000549688 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
CALCOCO1-215ENST00000549688 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
CALCOCO1-215ENST00000549688 FHAD1B1AJZ9 1412 aa11.67□□□□□ -0.54
CALCOCO1-215ENST00000549688 RAPGEF2Q9Y4G8 1499 aa11.66□□□□□ -0.54
CALCOCO1-215ENST00000549688 FAM9AQ8IZU1 332 aaPredicted RBP11.66□□□□□ -0.54
CALCOCO1-215ENST00000549688 CARMIL1Q5VZK9 1371 aa11.66□□□□□ -0.54
CALCOCO1-215ENST00000549688 GOLGA3Q08378 1498 aa11.65□□□□□ -0.54
CALCOCO1-215ENST00000549688 SYNJ2O15056 1496 aa11.64□□□□□ -0.55
CALCOCO1-215ENST00000549688 SNAPC4Q5SXM2 1469 aa11.64□□□□□ -0.55
CALCOCO1-215ENST00000549688 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
CALCOCO1-215ENST00000549688 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
CALCOCO1-215ENST00000549688 CTTNBP2Q8WZ74 1663 aa11.56□□□□□ -0.56
CALCOCO1-215ENST00000549688 CHD1O14646 1710 aa11.56□□□□□ -0.56
CALCOCO1-215ENST00000549688 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
CALCOCO1-215ENST00000549688 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
CALCOCO1-215ENST00000549688 FBLN2P98095 1184 aa11.52□□□□□ -0.57
CALCOCO1-215ENST00000549688 NUP160Q12769 1436 aa11.52□□□□□ -0.57
CALCOCO1-215ENST00000549688 KIAA0586Q9BVV6 1533 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms